BLASTX nr result
ID: Dioscorea21_contig00022815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00022815
(1321 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003573061.1| PREDICTED: F-box/kelch-repeat protein SKIP4-... 288 3e-75
ref|XP_002453173.1| hypothetical protein SORBIDRAFT_04g001090 [S... 286 6e-75
ref|NP_001045669.1| Os02g0114600 [Oryza sativa Japonica Group] g... 286 8e-75
dbj|BAD07929.1| putative SKP1 interacting partner [Oryza sativa ... 286 8e-75
gb|EEC72343.1| hypothetical protein OsI_05568 [Oryza sativa Indi... 285 1e-74
>ref|XP_003573061.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like isoform 1
[Brachypodium distachyon]
gi|357143812|ref|XP_003573062.1| PREDICTED:
F-box/kelch-repeat protein SKIP4-like isoform 2
[Brachypodium distachyon]
Length = 346
Score = 288 bits (736), Expect = 3e-75
Identities = 154/341 (45%), Positives = 209/341 (61%), Gaps = 4/341 (1%)
Frame = +3
Query: 222 PLIPGLPDDIALLCLARVPLRYHHVLRCVSRRWKALLGSEEWASCRQENNLEETLIYALC 401
PLI GLPD+IALLCL+RVP + H+VLRCVSR W+ALL SEEW +CR+ NNL+E IY +C
Sbjct: 9 PLIHGLPDEIALLCLSRVPRQCHNVLRCVSRGWRALLCSEEWHACRKRNNLDEPWIYLVC 68
Query: 402 RDNTTGRNCFYVLYPEPASRCWKLHGDVPTQFSENXXXXXXXXXXXXXXXSNCGFPGGAT 581
R TG C YVL P+PA+R K+ + S C + T
Sbjct: 69 RG--TGIKC-YVLAPDPATRSLKVLQVMEPPCSGREGISIETLDKRLFVLGGCSWLKDGT 125
Query: 582 DAFYRYVPSANKWEEGAPM-AGRCYFLSTVLNEKLYIIGGNGMSIVDQQSLDVYDSHSNS 758
D Y Y S+N+W + APM RC+F+++ LN+K+Y+ GG G++ S D+YD +NS
Sbjct: 126 DEAYCYDASSNRWSKAAPMPTARCFFVTSALNDKIYVTGGLGLTDKSPNSWDIYDKSTNS 185
Query: 759 WSSNEIQIPLNDIVKVIPLDGKIHTIHKI-WNFPY-AGVCDPSCCRWNKTNNDLASC-CG 929
W ++ + DIVK I LDG++ TIHK WN Y AG+ DP W T N++A C G
Sbjct: 186 WFPHKNPMLTPDIVKFIALDGELITIHKAAWNRMYFAGIYDPINQTWRGTENEIALCWSG 245
Query: 930 PTVVIDGTLYMLDETSGTRLMIWQKSSEEWVALGRLSHQLTQPPCQLVAVGRKIFVVGQG 1109
PTVV+DGTLYMLD++ GT+LM+W+K ++EWV LGRLS +LT+PPC+LVA+GRKI+V+G+G
Sbjct: 246 PTVVLDGTLYMLDQSLGTKLMMWRKETKEWVMLGRLSDKLTRPPCELVAIGRKIYVIGRG 305
Query: 1110 LHXXXXXXXXXXKVEGMXXXXXXXXXXXXXXXXISCKAVTI 1232
L +V+G C+ +TI
Sbjct: 306 LSTVTIDVDTAARVDGFLVSSSTGPLMEHDCSPEQCRVITI 346
>ref|XP_002453173.1| hypothetical protein SORBIDRAFT_04g001090 [Sorghum bicolor]
gi|241933004|gb|EES06149.1| hypothetical protein
SORBIDRAFT_04g001090 [Sorghum bicolor]
Length = 346
Score = 286 bits (733), Expect = 6e-75
Identities = 149/316 (47%), Positives = 201/316 (63%), Gaps = 4/316 (1%)
Frame = +3
Query: 222 PLIPGLPDDIALLCLARVPLRYHHVLRCVSRRWKALLGSEEWASCRQENNLEETLIYALC 401
PLI GLPD+IAL+CLARVP RYH++LR VS+RW+ALL SEEW CR+ NNL+E+ IY +C
Sbjct: 9 PLIHGLPDEIALICLARVPRRYHNILRHVSKRWRALLCSEEWHLCRKRNNLDESWIYVIC 68
Query: 402 RDNTTGRNCFYVLYPEPASRCWKLHGDVPTQFSENXXXXXXXXXXXXXXXSNCGFPGGAT 581
R+ G C YVL P+P+SRC+++ + S C AT
Sbjct: 69 RE--AGIKC-YVLAPDPSSRCFRIMHIIEPPCSGRKGVTIEAIDKRLFLLGGCNCVHDAT 125
Query: 582 DAFYRYVPSANKWEEGAPM-AGRCYFLSTVLNEKLYIIGGNGMSIVDQQSLDVYDSHSNS 758
D Y Y S+N+W APM RCYF+S LNEKLY+ GG G++ S D+YD ++S
Sbjct: 126 DEVYCYDASSNRWSAAAPMPTARCYFVSASLNEKLYVTGGYGLTDKSPNSWDIYDPATDS 185
Query: 759 WSSNEIQIPLNDIVKVIPLDGKIHTIHKI-WNFPY-AGVCDPSCCRWNKTNNDLASCCG- 929
W +++ + DIVK + LD ++ TIH+ WN Y AG+ DP W T N++A CC
Sbjct: 186 WCAHKNPMLTPDIVKFVALDEELVTIHRAAWNRMYFAGIYDPLDRTWRGTENEIALCCSS 245
Query: 930 PTVVIDGTLYMLDETSGTRLMIWQKSSEEWVALGRLSHQLTQPPCQLVAVGRKIFVVGQG 1109
PTVV+DGTLYML+++ GT+LM WQK ++EW LGRLS ++T+PPC LVA+GRKI V+G+G
Sbjct: 246 PTVVVDGTLYMLEQSMGTKLMRWQKDTKEWAMLGRLSDKVTRPPCALVAIGRKIHVIGRG 305
Query: 1110 LHXXXXXXXXXXKVEG 1157
L +V+G
Sbjct: 306 LSIVTVDVDTAARVDG 321
>ref|NP_001045669.1| Os02g0114600 [Oryza sativa Japonica Group]
gi|113535200|dbj|BAF07583.1| Os02g0114600 [Oryza sativa
Japonica Group] gi|215692952|dbj|BAG88372.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215707269|dbj|BAG93729.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 360
Score = 286 bits (732), Expect = 8e-75
Identities = 146/305 (47%), Positives = 198/305 (64%), Gaps = 4/305 (1%)
Frame = +3
Query: 210 GSNFPLIPGLPDDIALLCLARVPLRYHHVLRCVSRRWKALLGSEEWASCRQENNLEETLI 389
G + LI GLPD+IA+LCLARVP RYH+ LRCVS+RW+ALL SEEW SCR+ NNL+E +
Sbjct: 20 GPHTSLIHGLPDEIAILCLARVPRRYHNALRCVSKRWRALLSSEEWHSCRKRNNLDEPWV 79
Query: 390 YALCRDNTTGRNCFYVLYPEPASRCWKLHGDVPTQFSENXXXXXXXXXXXXXXXSNCGFP 569
Y +CR +TG C YVL P+P +R K+ + S C +
Sbjct: 80 YVICR--STGIKC-YVLAPDPTTRSLKIMQVIEPPCSSREGISIETLDKRLFLLGGCSWL 136
Query: 570 GGATDAFYRYVPSANKWEEGAPM-AGRCYFLSTVLNEKLYIIGGNGMSIVDQQSLDVYDS 746
A D + Y S+N W APM RCYF+S L++KLYI GG G++ S D+YD
Sbjct: 137 KDANDEVFCYDASSNCWSSVAPMPTARCYFVSAALDKKLYITGGLGLTDKSPNSWDIYDP 196
Query: 747 HSNSWSSNEIQIPLNDIVKVIPLDGKIHTIHK-IWNFPY-AGVCDPSCCRWNKTNNDLAS 920
+NSW ++ + DIVK + LDG++ T+HK WN Y AG+ DP C W T N++A
Sbjct: 197 VTNSWCVHKNPMLTPDIVKFVALDGELVTVHKAAWNRMYFAGIYDPLCRTWRGTENEIAL 256
Query: 921 C-CGPTVVIDGTLYMLDETSGTRLMIWQKSSEEWVALGRLSHQLTQPPCQLVAVGRKIFV 1097
C G TVV+DGTLYML+++ GT+LM+WQK ++EW+ LGRLS +LT+PPC+LV +GRKI++
Sbjct: 257 CWSGSTVVMDGTLYMLEQSLGTKLMMWQKETKEWIMLGRLSDKLTRPPCELVGIGRKIYI 316
Query: 1098 VGQGL 1112
+G+GL
Sbjct: 317 IGRGL 321
>dbj|BAD07929.1| putative SKP1 interacting partner [Oryza sativa Japonica Group]
gi|41052782|dbj|BAD07651.1| putative SKP1 interacting
partner [Oryza sativa Japonica Group]
gi|222622040|gb|EEE56172.1| hypothetical protein
OsJ_05096 [Oryza sativa Japonica Group]
Length = 345
Score = 286 bits (732), Expect = 8e-75
Identities = 146/305 (47%), Positives = 198/305 (64%), Gaps = 4/305 (1%)
Frame = +3
Query: 210 GSNFPLIPGLPDDIALLCLARVPLRYHHVLRCVSRRWKALLGSEEWASCRQENNLEETLI 389
G + LI GLPD+IA+LCLARVP RYH+ LRCVS+RW+ALL SEEW SCR+ NNL+E +
Sbjct: 5 GPHTSLIHGLPDEIAILCLARVPRRYHNALRCVSKRWRALLSSEEWHSCRKRNNLDEPWV 64
Query: 390 YALCRDNTTGRNCFYVLYPEPASRCWKLHGDVPTQFSENXXXXXXXXXXXXXXXSNCGFP 569
Y +CR +TG C YVL P+P +R K+ + S C +
Sbjct: 65 YVICR--STGIKC-YVLAPDPTTRSLKIMQVIEPPCSSREGISIETLDKRLFLLGGCSWL 121
Query: 570 GGATDAFYRYVPSANKWEEGAPM-AGRCYFLSTVLNEKLYIIGGNGMSIVDQQSLDVYDS 746
A D + Y S+N W APM RCYF+S L++KLYI GG G++ S D+YD
Sbjct: 122 KDANDEVFCYDASSNCWSSVAPMPTARCYFVSAALDKKLYITGGLGLTDKSPNSWDIYDP 181
Query: 747 HSNSWSSNEIQIPLNDIVKVIPLDGKIHTIHK-IWNFPY-AGVCDPSCCRWNKTNNDLAS 920
+NSW ++ + DIVK + LDG++ T+HK WN Y AG+ DP C W T N++A
Sbjct: 182 VTNSWCVHKNPMLTPDIVKFVALDGELVTVHKAAWNRMYFAGIYDPLCRTWRGTENEIAL 241
Query: 921 C-CGPTVVIDGTLYMLDETSGTRLMIWQKSSEEWVALGRLSHQLTQPPCQLVAVGRKIFV 1097
C G TVV+DGTLYML+++ GT+LM+WQK ++EW+ LGRLS +LT+PPC+LV +GRKI++
Sbjct: 242 CWSGSTVVMDGTLYMLEQSLGTKLMMWQKETKEWIMLGRLSDKLTRPPCELVGIGRKIYI 301
Query: 1098 VGQGL 1112
+G+GL
Sbjct: 302 IGRGL 306
>gb|EEC72343.1| hypothetical protein OsI_05568 [Oryza sativa Indica Group]
Length = 345
Score = 285 bits (730), Expect = 1e-74
Identities = 146/305 (47%), Positives = 197/305 (64%), Gaps = 4/305 (1%)
Frame = +3
Query: 210 GSNFPLIPGLPDDIALLCLARVPLRYHHVLRCVSRRWKALLGSEEWASCRQENNLEETLI 389
G + LI GLPD+IA+LCLARVP RYH+ LRCVS+RW+ALL SEEW SCR+ NNL+E +
Sbjct: 5 GPHTSLIHGLPDEIAILCLARVPRRYHNALRCVSKRWRALLSSEEWHSCRKRNNLDEPWV 64
Query: 390 YALCRDNTTGRNCFYVLYPEPASRCWKLHGDVPTQFSENXXXXXXXXXXXXXXXSNCGFP 569
Y +CR +TG C YVL P+P +R K+ + S C +
Sbjct: 65 YVICR--STGIKC-YVLAPDPTTRSLKIMQVIEPPCSSREGISIETLDKRLFLLGGCSWL 121
Query: 570 GGATDAFYRYVPSANKWEEGAPM-AGRCYFLSTVLNEKLYIIGGNGMSIVDQQSLDVYDS 746
A D + Y S+N W APM RCYF+S L++KLYI GG G++ S D+YD
Sbjct: 122 KDANDEVFCYDASSNCWSSVAPMPTARCYFVSAALDKKLYITGGLGLTDKSPNSWDIYDP 181
Query: 747 HSNSWSSNEIQIPLNDIVKVIPLDGKIHTIHK-IWNFPY-AGVCDPSCCRWNKTNNDLAS 920
+NSW ++ + DIVK + LDG++ T+HK WN Y AG+ DP C W T N++A
Sbjct: 182 VTNSWCVHKNPMLTPDIVKFVALDGELVTVHKAAWNRMYFAGIYDPLCRTWRGTENEIAL 241
Query: 921 C-CGPTVVIDGTLYMLDETSGTRLMIWQKSSEEWVALGRLSHQLTQPPCQLVAVGRKIFV 1097
C G TVV+DGTLYML+++ GT+LM+WQK +EW+ LGRLS +LT+PPC+LV +GRKI++
Sbjct: 242 CWSGSTVVMDGTLYMLEQSLGTKLMMWQKEMKEWIMLGRLSDKLTRPPCELVGIGRKIYI 301
Query: 1098 VGQGL 1112
+G+GL
Sbjct: 302 IGRGL 306