BLASTX nr result

ID: Dioscorea21_contig00022801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022801
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563556.1| PREDICTED: ribosomal RNA large subunit methy...   239   2e-61
tpg|DAA52227.1| TPA: hypothetical protein ZEAMMB73_375323 [Zea m...   234   4e-60
gb|AAO18459.1| putative FtsJ cell division protein [Oryza sativa...   233   1e-59
ref|NP_001051734.1| Os03g0822300 [Oryza sativa Japonica Group] g...   233   1e-59
ref|XP_002466183.1| hypothetical protein SORBIDRAFT_01g003090 [S...   224   5e-57

>ref|XP_003563556.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Brachypodium distachyon]
          Length = 234

 Score =  239 bits (609), Expect = 2e-61
 Identities = 123/182 (67%), Positives = 141/182 (77%), Gaps = 7/182 (3%)
 Frame = -3

Query: 527 LLEMQKQYKLITPGASVLDLGCAPGAWLQVACQSLGPLEXXXXXXXXXXXXXXVPSSHCD 348
           L+++QKQ+KLI PGA+VLDLGCAPGAWLQVACQ+LGPLE              VPS+HCD
Sbjct: 28  LIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGVVIGLDVKKVKVPSAHCD 87

Query: 347 SRVKTVCADAMTLLKGHARALSPQEKGFSVILSDMCPVVSGITTKDAALSVELGRRALSL 168
           SRV+TVCAD M L+K  ARA+SPQE+GFSVILSDMCPVVSGITTKD A+S ELG RALSL
Sbjct: 88  SRVRTVCADVMALMKQQARAMSPQERGFSVILSDMCPVVSGITTKDEAISCELGMRALSL 147

Query: 167 AVGKVSLPGSADDSDDRE-------PDANEAGVLRRGGNLVIKLLESEDVQGFSKFCKSR 9
           A+GK+ L  SAD S   E       PD +E GVLRRGGNLVIK LE+EDV GFS+FCK +
Sbjct: 148 AIGKIKLKESADYSITMEKFQSSTGPDPDEDGVLRRGGNLVIKFLENEDVPGFSRFCKEK 207

Query: 8   FK 3
           FK
Sbjct: 208 FK 209


>tpg|DAA52227.1| TPA: hypothetical protein ZEAMMB73_375323 [Zea mays]
          Length = 232

 Score =  234 bits (598), Expect = 4e-60
 Identities = 119/181 (65%), Positives = 138/181 (76%), Gaps = 6/181 (3%)
 Frame = -3

Query: 527 LLEMQKQYKLITPGASVLDLGCAPGAWLQVACQSLGPLEXXXXXXXXXXXXXXVPSSHCD 348
           L++MQKQ+KLI PGA+VLDLGCAPGAWLQVACQ+LGPLE              VPS+HCD
Sbjct: 27  LIQMQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGIVVGVDVKKVKVPSAHCD 86

Query: 347 SRVKTVCADAMTLLKGHARALSPQEKGFSVILSDMCPVVSGITTKDAALSVELGRRALSL 168
           SRV+TVCAD MTL+K  ARA+SPQE+GFSVILSDMCP VSGITTKD A+S ELG RALSL
Sbjct: 87  SRVRTVCADVMTLMKRQARAMSPQERGFSVILSDMCPPVSGITTKDGAISCELGMRALSL 146

Query: 167 AVGKVSLPGSADDS------DDREPDANEAGVLRRGGNLVIKLLESEDVQGFSKFCKSRF 6
           AVGK+ L  S             EP+++E GVLRRGGNLV+K LE+ED+ GF KFCK +F
Sbjct: 147 AVGKIKLKDSNYSDTLEKYLSSTEPESDEDGVLRRGGNLVVKFLENEDISGFGKFCKVKF 206

Query: 5   K 3
           K
Sbjct: 207 K 207


>gb|AAO18459.1| putative FtsJ cell division protein [Oryza sativa Japonica Group]
          Length = 403

 Score =  233 bits (594), Expect = 1e-59
 Identities = 121/185 (65%), Positives = 140/185 (75%), Gaps = 10/185 (5%)
 Frame = -3

Query: 527 LLEMQKQYKLITPGASVLDLGCAPGAWLQVACQSLGPLEXXXXXXXXXXXXXXVPSSHCD 348
           L+++QKQ+KLI PGA+VLDLGCAPGAWLQVACQ+LGPLE              VPS+HCD
Sbjct: 28  LIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGVIVGVDVKKVKVPSAHCD 87

Query: 347 SRVKTVCADAMTLLKGHARALSPQEKGFSVILSDMCPVVSGITTKDAALSVELGRRALSL 168
           SRV+TVCAD M L+K  ARA+SPQE+GFSVILSDMCPVVSGITTKDAA+S ELG RALSL
Sbjct: 88  SRVRTVCADVMALMKQQARAMSPQERGFSVILSDMCPVVSGITTKDAAISCELGMRALSL 147

Query: 167 AVGKVSLPGSADDSD----------DREPDANEAGVLRRGGNLVIKLLESEDVQGFSKFC 18
           AVGK+     A DSD            EPD +E G+LRRGG+LVIK LE+ED+ GF KFC
Sbjct: 148 AVGKM----KAKDSDCIAILEKFQSSTEPDPDEDGILRRGGSLVIKFLENEDIPGFGKFC 203

Query: 17  KSRFK 3
           K +FK
Sbjct: 204 KEKFK 208


>ref|NP_001051734.1| Os03g0822300 [Oryza sativa Japonica Group]
           gi|108711810|gb|ABF99605.1| FtsJ-like methyltransferase
           family protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113550205|dbj|BAF13648.1|
           Os03g0822300 [Oryza sativa Japonica Group]
           gi|218194004|gb|EEC76431.1| hypothetical protein
           OsI_14112 [Oryza sativa Indica Group]
           gi|222626068|gb|EEE60200.1| hypothetical protein
           OsJ_13158 [Oryza sativa Japonica Group]
          Length = 233

 Score =  233 bits (594), Expect = 1e-59
 Identities = 121/185 (65%), Positives = 140/185 (75%), Gaps = 10/185 (5%)
 Frame = -3

Query: 527 LLEMQKQYKLITPGASVLDLGCAPGAWLQVACQSLGPLEXXXXXXXXXXXXXXVPSSHCD 348
           L+++QKQ+KLI PGA+VLDLGCAPGAWLQVACQ+LGPLE              VPS+HCD
Sbjct: 28  LIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGVIVGVDVKKVKVPSAHCD 87

Query: 347 SRVKTVCADAMTLLKGHARALSPQEKGFSVILSDMCPVVSGITTKDAALSVELGRRALSL 168
           SRV+TVCAD M L+K  ARA+SPQE+GFSVILSDMCPVVSGITTKDAA+S ELG RALSL
Sbjct: 88  SRVRTVCADVMALMKQQARAMSPQERGFSVILSDMCPVVSGITTKDAAISCELGMRALSL 147

Query: 167 AVGKVSLPGSADDSD----------DREPDANEAGVLRRGGNLVIKLLESEDVQGFSKFC 18
           AVGK+     A DSD            EPD +E G+LRRGG+LVIK LE+ED+ GF KFC
Sbjct: 148 AVGKM----KAKDSDCIAILEKFQSSTEPDPDEDGILRRGGSLVIKFLENEDIPGFGKFC 203

Query: 17  KSRFK 3
           K +FK
Sbjct: 204 KEKFK 208


>ref|XP_002466183.1| hypothetical protein SORBIDRAFT_01g003090 [Sorghum bicolor]
           gi|241920037|gb|EER93181.1| hypothetical protein
           SORBIDRAFT_01g003090 [Sorghum bicolor]
          Length = 233

 Score =  224 bits (572), Expect = 5e-57
 Identities = 119/183 (65%), Positives = 138/183 (75%), Gaps = 8/183 (4%)
 Frame = -3

Query: 527 LLEMQKQYKLITPGASVLDLGCAPGAWLQVACQSLGPLEXXXXXXXXXXXXXXV-PSSHC 351
           L++MQKQ+KLI PGA+VLDLGCAPGAWLQVACQ+LGPLE                PS+HC
Sbjct: 27  LIQMQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGVVVGVDVHQKVKVPSAHC 86

Query: 350 DSRVKTVCADAMTLLKGHARALSPQEKGFSVILSDMCPVVSGITTKDAALSVELGRRALS 171
           DSRV+TV AD MT++K  ARA+SPQE+GFSVILSDMCP VSGITTKD A+S ELG RALS
Sbjct: 87  DSRVRTVRADVMTMMKQQARAMSPQERGFSVILSDMCPPVSGITTKDGAISCELGMRALS 146

Query: 170 LAVGKVSLPGSADDSD-------DREPDANEAGVLRRGGNLVIKLLESEDVQGFSKFCKS 12
           LAVGK+ L  S D S+         EPD +E GVLRRGGNLV+K LE+ED+ GF KFCK 
Sbjct: 147 LAVGKIKLKES-DYSEILEKYLSSTEPDPDEDGVLRRGGNLVMKFLENEDISGFGKFCKV 205

Query: 11  RFK 3
           +FK
Sbjct: 206 KFK 208


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