BLASTX nr result

ID: Dioscorea21_contig00022800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022800
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563556.1| PREDICTED: ribosomal RNA large subunit methy...    55   5e-06
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...    55   6e-06

>ref|XP_003563556.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Brachypodium distachyon]
          Length = 234

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = -3

Query: 261 CKSRFKKASMLRPKATRSCSREIYLICQGLK 169
           CK +FKK S+LRPKATRS SREIYLIC+GL+
Sbjct: 204 CKEKFKKVSLLRPKATRSSSREIYLICEGLR 234


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = -3

Query: 261 CKSRFKKASMLRPKATRSCSREIYLICQGLK 169
           CK  F+KAS LRPKATRS SREIYLICQGLK
Sbjct: 198 CKPLFRKASWLRPKATRSSSREIYLICQGLK 228


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