BLASTX nr result

ID: Dioscorea21_contig00022786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022786
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat...   130   9e-29
emb|CBI36364.3| unnamed protein product [Vitis vinifera]              130   9e-29
gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japo...   129   3e-28
ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28

>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/144 (46%), Positives = 91/144 (63%)
 Frame = +2

Query: 2   HGIAARNEHYCCIIDLLGRAGMVRKAYDLILSCDHEPEPSVWGALLNACVTLCDAEIGEI 181
           HGI  + EHY C++ LL R G + +AY +I     EP+  VWGALL++C    +  +GEI
Sbjct: 507 HGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEI 566

Query: 182 AARKLFELEPGKSAPYVALASIFAAKGRWDEAAEIRELMNCQGIIKDAGYSWIEIGGAVH 361
           AA KLF LEP     Y+ L++I+A+KG WDE   IRE+M  +G+ K+ GYSWIE+G  VH
Sbjct: 567 AAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVH 626

Query: 362 KFRAGKDMHCAEMKEILSLCCELN 433
              AG   H  +MK+IL    +LN
Sbjct: 627 MLLAGDQSH-PQMKDILEKLDKLN 649


>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/129 (46%), Positives = 83/129 (64%)
 Frame = +2

Query: 2    HGIAARNEHYCCIIDLLGRAGMVRKAYDLILSCDHEPEPSVWGALLNACVTLCDAEIGEI 181
            + I A+ EHY C++DLLGRAG +  A + +     EPE S WGALL AC    D ++G +
Sbjct: 844  YNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRL 903

Query: 182  AARKLFELEPGKSAPYVALASIFAAKGRWDEAAEIRELMNCQGIIKDAGYSWIEIGGAVH 361
            AA++LFEL+P    PYV +++I+AA GRW E  +IR++M  +G+ KD G SWIEI   + 
Sbjct: 904  AAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQ 963

Query: 362  KFRAGKDMH 388
             F AG   H
Sbjct: 964  IFHAGSKTH 972


>emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/129 (46%), Positives = 83/129 (64%)
 Frame = +2

Query: 2   HGIAARNEHYCCIIDLLGRAGMVRKAYDLILSCDHEPEPSVWGALLNACVTLCDAEIGEI 181
           + I A+ EHY C++DLLGRAG +  A + +     EPE S WGALL AC    D ++G +
Sbjct: 588 YNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRL 647

Query: 182 AARKLFELEPGKSAPYVALASIFAAKGRWDEAAEIRELMNCQGIIKDAGYSWIEIGGAVH 361
           AA++LFEL+P    PYV +++I+AA GRW E  +IR++M  +G+ KD G SWIEI   + 
Sbjct: 648 AAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQ 707

Query: 362 KFRAGKDMH 388
            F AG   H
Sbjct: 708 IFHAGSKTH 716


>gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/142 (49%), Positives = 87/142 (61%)
 Frame = +2

Query: 5   GIAARNEHYCCIIDLLGRAGMVRKAYDLILSCDHEPEPSVWGALLNACVTLCDAEIGEIA 184
           GI  R EHY C++DLLGRAGM  +AY++I      P  SVWGALL AC      E+G IA
Sbjct: 454 GIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIA 513

Query: 185 ARKLFELEPGKSAPYVALASIFAAKGRWDEAAEIRELMNCQGIIKDAGYSWIEIGGAVHK 364
           A KLFEL+P  S  +V L+++FA+ GRW EA +IR+ M   GI KD G SW+     VH 
Sbjct: 514 AEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHV 573

Query: 365 FRAGKDMHCAEMKEILSLCCEL 430
           FRA KD       EI +L  +L
Sbjct: 574 FRA-KDTKHEMYNEIQALLSKL 594


>ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Glycine max]
          Length = 975

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/148 (41%), Positives = 93/148 (62%)
 Frame = +2

Query: 2    HGIAARNEHYCCIIDLLGRAGMVRKAYDLILSCDHEPEPSVWGALLNACVTLCDAEIGEI 181
            +G+  + EHY C++D+LGRAG + +A  L+     EP+  +W +LL++C    D EIGE 
Sbjct: 734  YGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEE 793

Query: 182  AARKLFELEPGKSAPYVALASIFAAKGRWDEAAEIRELMNCQGIIKDAGYSWIEIGGAVH 361
             ++KL ELEP K+  YV L++++A  G+WDE  ++R+ M   G+ KDAG SWIEIGG V+
Sbjct: 794  VSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVY 853

Query: 362  KFRAGKDMHCAEMKEILSLCCELNSCIS 445
            +F    D   +E K+I     +L   IS
Sbjct: 854  RFLV-SDGSLSESKKIQQTWIKLEKKIS 880


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