BLASTX nr result

ID: Dioscorea21_contig00022723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022723
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19452.3| unnamed protein product [Vitis vinifera]              300   1e-79
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   239   4e-61
gb|ABK26521.1| unknown [Picea sitchensis]                             236   3e-60
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2...   232   6e-59

>emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  300 bits (769), Expect = 1e-79
 Identities = 141/221 (63%), Positives = 171/221 (77%)
 Frame = -3

Query: 713  MVETGILQLNLRQNSCVPLLKALLGACHAHNQLELGVQVARRILELDPEDETSHVLLSNL 534
            +VE GI       +  + L K LLGACHA  QL+LGV+ A +ILEL+PEDE +++LL+NL
Sbjct: 701  LVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANL 760

Query: 533  YASVGMWENAITVRNMMKAKGLKKEVGCSWVELENRRHVFVAGDCSHPDRKRIYDKLAEL 354
            YAS G+WE+AI VR  M+ KGL+KEVGCSW++  NRRHVFVAGD  HP RK IY+KLA+L
Sbjct: 761  YASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQL 820

Query: 353  DEKCRLIGYIPMTNFVLHDVDEVQKETILSSHSEKLAVSFSVLQNGRRKGAIRVIKNLRV 174
            +  CR +GY+PMT  VLHDVDE +KE IL  HSEKLAVSF +L  G   G IRV+KNLRV
Sbjct: 821  NYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRV 880

Query: 173  CGDCHNWMKFASKVEGREIVLRDSRRFHFFKDGKCSCGDYW 51
            C DCH+WMKFAS +E REI+LRDS+RFH F+DG CSCGDYW
Sbjct: 881  CEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
            [Vitis vinifera]
          Length = 799

 Score =  239 bits (610), Expect = 4e-61
 Identities = 110/204 (53%), Positives = 149/204 (73%)
 Frame = -3

Query: 662  PLLKALLGACHAHNQLELGVQVARRILELDPEDETSHVLLSNLYASVGMWENAITVRNMM 483
            P+ +ALL  C  H  ++LG+Q A R+ EL P+ + ++VLLSN+YA+VG W++   VR +M
Sbjct: 597  PIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLM 656

Query: 482  KAKGLKKEVGCSWVELENRRHVFVAGDCSHPDRKRIYDKLAELDEKCRLIGYIPMTNFVL 303
            + KG+KKE GCSW+E+EN+ HVF+  D  HP+ + +Y+ L EL  K R +GYIP T FVL
Sbjct: 657  RDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVL 716

Query: 302  HDVDEVQKETILSSHSEKLAVSFSVLQNGRRKGAIRVIKNLRVCGDCHNWMKFASKVEGR 123
            HD++  QKE +LS+HSEKLAV F +L+       +RV KNLR+CGDCHN  KF SKV  R
Sbjct: 717  HDMESEQKEYVLSTHSEKLAVGFGLLKL-PLGATVRVFKNLRICGDCHNAFKFMSKVVER 775

Query: 122  EIVLRDSRRFHFFKDGKCSCGDYW 51
            EIV+RD +RFH FK+G+CSCG+YW
Sbjct: 776  EIVVRDGKRFHHFKNGECSCGNYW 799


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  236 bits (602), Expect = 3e-60
 Identities = 109/200 (54%), Positives = 143/200 (71%)
 Frame = -3

Query: 650 ALLGACHAHNQLELGVQVARRILELDPEDETSHVLLSNLYASVGMWENAITVRNMMKAKG 471
           +LLGAC  H  +EL  +   +++EL PE+  ++VLLSN+YA+ G W++A  VR MMK + 
Sbjct: 172 SLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRS 231

Query: 470 LKKEVGCSWVELENRRHVFVAGDCSHPDRKRIYDKLAELDEKCRLIGYIPMTNFVLHDVD 291
           +KKE GCSW+E++N+ H F+ GD SHP  + IY+ L  L  + +  GYIP TNFVLHDV+
Sbjct: 232 VKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVE 291

Query: 290 EVQKETILSSHSEKLAVSFSVLQNGRRKGAIRVIKNLRVCGDCHNWMKFASKVEGREIVL 111
           E QKE IL  HSEKLA++F ++        IRV+KNLRVCGDCH   KF S++  REIVL
Sbjct: 292 EEQKEWILGHHSEKLAIAFGIISTPPGT-TIRVVKNLRVCGDCHTATKFISRIVSREIVL 350

Query: 110 RDSRRFHFFKDGKCSCGDYW 51
           RD+ RFH FKDG+CSCGDYW
Sbjct: 351 RDTHRFHHFKDGQCSCGDYW 370


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
            predicted protein [Populus trichocarpa]
          Length = 797

 Score =  233 bits (594), Expect = 3e-59
 Identities = 106/204 (51%), Positives = 146/204 (71%)
 Frame = -3

Query: 662  PLLKALLGACHAHNQLELGVQVARRILELDPEDETSHVLLSNLYASVGMWENAITVRNMM 483
            P+ +ALL  C  H  ++LG++ A R+ EL P+ + ++VLLSN+YA  G W +   VR +M
Sbjct: 595  PIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLM 654

Query: 482  KAKGLKKEVGCSWVELENRRHVFVAGDCSHPDRKRIYDKLAELDEKCRLIGYIPMTNFVL 303
            + +G+KKE GCSW+E+EN+ H F+ GD +HP+ ++IY+ L +L  + R IGY+P T  VL
Sbjct: 655  RDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVL 714

Query: 302  HDVDEVQKETILSSHSEKLAVSFSVLQNGRRKGAIRVIKNLRVCGDCHNWMKFASKVEGR 123
            HDV+   KE  LS+HSEKLAV++  ++       +RV KNLR+CGDCHN  KF SKV GR
Sbjct: 715  HDVESDLKEHELSTHSEKLAVAYGFMKL-PHGATVRVFKNLRICGDCHNAFKFMSKVVGR 773

Query: 122  EIVLRDSRRFHFFKDGKCSCGDYW 51
            EIV+RD +RFH F+DGKCSCGDYW
Sbjct: 774  EIVVRDGKRFHHFRDGKCSCGDYW 797


>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
            predicted protein [Populus trichocarpa]
          Length = 814

 Score =  232 bits (591), Expect = 6e-59
 Identities = 108/200 (54%), Positives = 143/200 (71%)
 Frame = -3

Query: 650  ALLGACHAHNQLELGVQVARRILELDPEDETSHVLLSNLYASVGMWENAITVRNMMKAKG 471
            +LLGAC  ++ +E+G   A  +L+L P+  + +VLLSN+Y+S G+W+ A+ +R  MKA G
Sbjct: 616  SLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMG 675

Query: 470  LKKEVGCSWVELENRRHVFVAGDCSHPDRKRIYDKLAELDEKCRLIGYIPMTNFVLHDVD 291
            +KKE GCSW+E  +  H F+AGD SHP  ++++D L  L E+ +  GY+P T  VLHD+D
Sbjct: 676  VKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDID 735

Query: 290  EVQKETILSSHSEKLAVSFSVLQNGRRKGAIRVIKNLRVCGDCHNWMKFASKVEGREIVL 111
            E +KETIL  HSEKLA++F +L N      IRV KNLRVC DCH   KF SK+E REI+L
Sbjct: 736  EEEKETILCGHSEKLAIAFGIL-NTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIIL 794

Query: 110  RDSRRFHFFKDGKCSCGDYW 51
            RD+RRFH FKDG CSCGDYW
Sbjct: 795  RDARRFHHFKDGTCSCGDYW 814


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