BLASTX nr result

ID: Dioscorea21_contig00022721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022721
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-08
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...    60   6e-07
ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...    59   8e-07
emb|CBI24130.3| unnamed protein product [Vitis vinifera]               59   8e-07
emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera]    59   8e-07

>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
            predicted protein [Populus trichocarpa]
          Length = 2052

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
 Frame = -1

Query: 737  QPAVDSEEGREEGELVXXXXXXXXXXXXXXPVEGAH---DSIPSDGGAN---------GD 594
            Q  V+ E  REEGELV                E      D+ P    A          G 
Sbjct: 1838 QLPVEFENEREEGELVAEVEEGADMSNMAGSPETGEVLPDTTPVASPARIDDEAMVPVGM 1897

Query: 593  ETGEISDLAEVSMEKSESTEIVEDLAEASDKPTGNNNDPSASDLERSPQPSSKTREGSPS 414
            E+GEI+    ++ EK++  +IVE++ E SDK + +  D  A + ++SP+ +S   E + +
Sbjct: 1898 ESGEINSPEMITDEKNDEGDIVEEIGEGSDK-SNDGGDQIAVETDQSPEAASVAGERTTA 1956

Query: 413  NITVSAVTDPQTSVTTAESEEQR-------SGQTISIRERARRNAMLRQAGIATP 270
                      Q S + AE+EE R       +   +++ ERAR+ AMLRQ G   P
Sbjct: 1957 TANTEMDASKQASSSGAEAEEVRQVSPASNTSTVVNLAERARQRAMLRQGGGGAP 2011


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
            gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
            [Ricinus communis]
          Length = 2095

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
 Frame = -1

Query: 737  QPAVDSEEGREEGELVXXXXXXXXXXXXXXPVEGAHDS-----------------IPSDG 609
            Q  ++SE  REEGEL                V G+ +S                    D 
Sbjct: 1884 QTMMESESEREEGELAPDVTEAEEGANMSN-VMGSPESGEGLVEVGITPVTSPARFDEDV 1942

Query: 608  GANGDETGEISDLAEVSMEKSESTEIVEDLAEASDKPTGNNNDPSASDLERSPQPSSKTR 429
            G    E GEI+    V+ EK++  ++VE+ AE SDK + + ND  A++ +++P+ +S+  
Sbjct: 1943 GTAEVEFGEINHPEVVNEEKNDEGDLVEEPAECSDK-SNDGNDQIAAETDQNPETTSQAV 2001

Query: 428  EGSPSNITVSAVTDPQTSVTTAESEEQRSGQT---ISIRERARRNAMLRQAGIATPPP 264
            E + +N T       Q   T    +   +  T   + + +RAR  AMLRQ+G+    P
Sbjct: 2002 ENAAANATTEVDVSKQAMGTEDVKQVSPASSTSTVVDLAKRARERAMLRQSGVTVLSP 2059


>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 18/136 (13%)
 Frame = -1

Query: 623  IPSDGGANGDETGEIS---DLAEVSM------EKSESTEIVEDLAEASDKPTGNNNDPSA 471
            +P    A GDE G ++   D+ +++       EK+   +++E++AE SDK + + N+  A
Sbjct: 1920 VPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDK-SNDGNEQIA 1978

Query: 470  SDLERSPQPSSKTREGSPSNITVSAV-TDPQTSVTT-AESEEQR-------SGQTISIRE 318
             + +++P+ +  +   S S  TV  V    Q S T  A+ EE +       S  TI+++E
Sbjct: 1979 VETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQE 2038

Query: 317  RARRNAMLRQAGIATP 270
            RAR+ AMLRQAG+ +P
Sbjct: 2039 RARQRAMLRQAGVLSP 2054


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 18/136 (13%)
 Frame = -1

Query: 623  IPSDGGANGDETGEIS---DLAEVSM------EKSESTEIVEDLAEASDKPTGNNNDPSA 471
            +P    A GDE G ++   D+ +++       EK+   +++E++AE SDK + + N+  A
Sbjct: 1921 VPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDK-SNDGNEQIA 1979

Query: 470  SDLERSPQPSSKTREGSPSNITVSAV-TDPQTSVTT-AESEEQR-------SGQTISIRE 318
             + +++P+ +  +   S S  TV  V    Q S T  A+ EE +       S  TI+++E
Sbjct: 1980 VETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQE 2039

Query: 317  RARRNAMLRQAGIATP 270
            RAR+ AMLRQAG+ +P
Sbjct: 2040 RARQRAMLRQAGVLSP 2055


>emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera]
          Length = 1491

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 18/136 (13%)
 Frame = -1

Query: 623  IPSDGGANGDETGEIS---DLAEVSM------EKSESTEIVEDLAEASDKPTGNNNDPSA 471
            +P    A GDE G ++   D+ +++       EK+   +++E++AE SDK + + N+  A
Sbjct: 1324 VPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDK-SNDGNEQIA 1382

Query: 470  SDLERSPQPSSKTREGSPSNITVSAV-TDPQTSVTT-AESEEQR-------SGQTISIRE 318
             + +++P+ +  +   S S  TV  V    Q S T  A+ EE +       S  TI+++E
Sbjct: 1383 VETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQE 1442

Query: 317  RARRNAMLRQAGIATP 270
            RAR+ AMLRQAG+ +P
Sbjct: 1443 RARQRAMLRQAGVLSP 1458


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