BLASTX nr result
ID: Dioscorea21_contig00022721
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00022721 (740 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2... 64 4e-08 ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi... 60 6e-07 ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v... 59 8e-07 emb|CBI24130.3| unnamed protein product [Vitis vinifera] 59 8e-07 emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera] 59 8e-07 >ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1| predicted protein [Populus trichocarpa] Length = 2052 Score = 63.5 bits (153), Expect = 4e-08 Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 19/175 (10%) Frame = -1 Query: 737 QPAVDSEEGREEGELVXXXXXXXXXXXXXXPVEGAH---DSIPSDGGAN---------GD 594 Q V+ E REEGELV E D+ P A G Sbjct: 1838 QLPVEFENEREEGELVAEVEEGADMSNMAGSPETGEVLPDTTPVASPARIDDEAMVPVGM 1897 Query: 593 ETGEISDLAEVSMEKSESTEIVEDLAEASDKPTGNNNDPSASDLERSPQPSSKTREGSPS 414 E+GEI+ ++ EK++ +IVE++ E SDK + + D A + ++SP+ +S E + + Sbjct: 1898 ESGEINSPEMITDEKNDEGDIVEEIGEGSDK-SNDGGDQIAVETDQSPEAASVAGERTTA 1956 Query: 413 NITVSAVTDPQTSVTTAESEEQR-------SGQTISIRERARRNAMLRQAGIATP 270 Q S + AE+EE R + +++ ERAR+ AMLRQ G P Sbjct: 1957 TANTEMDASKQASSSGAEAEEVRQVSPASNTSTVVNLAERARQRAMLRQGGGGAP 2011 >ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis] gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative [Ricinus communis] Length = 2095 Score = 59.7 bits (143), Expect = 6e-07 Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 20/178 (11%) Frame = -1 Query: 737 QPAVDSEEGREEGELVXXXXXXXXXXXXXXPVEGAHDS-----------------IPSDG 609 Q ++SE REEGEL V G+ +S D Sbjct: 1884 QTMMESESEREEGELAPDVTEAEEGANMSN-VMGSPESGEGLVEVGITPVTSPARFDEDV 1942 Query: 608 GANGDETGEISDLAEVSMEKSESTEIVEDLAEASDKPTGNNNDPSASDLERSPQPSSKTR 429 G E GEI+ V+ EK++ ++VE+ AE SDK + + ND A++ +++P+ +S+ Sbjct: 1943 GTAEVEFGEINHPEVVNEEKNDEGDLVEEPAECSDK-SNDGNDQIAAETDQNPETTSQAV 2001 Query: 428 EGSPSNITVSAVTDPQTSVTTAESEEQRSGQT---ISIRERARRNAMLRQAGIATPPP 264 E + +N T Q T + + T + + +RAR AMLRQ+G+ P Sbjct: 2002 ENAAANATTEVDVSKQAMGTEDVKQVSPASSTSTVVDLAKRARERAMLRQSGVTVLSP 2059 >ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera] Length = 2087 Score = 59.3 bits (142), Expect = 8e-07 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 18/136 (13%) Frame = -1 Query: 623 IPSDGGANGDETGEIS---DLAEVSM------EKSESTEIVEDLAEASDKPTGNNNDPSA 471 +P A GDE G ++ D+ +++ EK+ +++E++AE SDK + + N+ A Sbjct: 1920 VPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDK-SNDGNEQIA 1978 Query: 470 SDLERSPQPSSKTREGSPSNITVSAV-TDPQTSVTT-AESEEQR-------SGQTISIRE 318 + +++P+ + + S S TV V Q S T A+ EE + S TI+++E Sbjct: 1979 VETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQE 2038 Query: 317 RARRNAMLRQAGIATP 270 RAR+ AMLRQAG+ +P Sbjct: 2039 RARQRAMLRQAGVLSP 2054 >emb|CBI24130.3| unnamed protein product [Vitis vinifera] Length = 2088 Score = 59.3 bits (142), Expect = 8e-07 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 18/136 (13%) Frame = -1 Query: 623 IPSDGGANGDETGEIS---DLAEVSM------EKSESTEIVEDLAEASDKPTGNNNDPSA 471 +P A GDE G ++ D+ +++ EK+ +++E++AE SDK + + N+ A Sbjct: 1921 VPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDK-SNDGNEQIA 1979 Query: 470 SDLERSPQPSSKTREGSPSNITVSAV-TDPQTSVTT-AESEEQR-------SGQTISIRE 318 + +++P+ + + S S TV V Q S T A+ EE + S TI+++E Sbjct: 1980 VETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQE 2039 Query: 317 RARRNAMLRQAGIATP 270 RAR+ AMLRQAG+ +P Sbjct: 2040 RARQRAMLRQAGVLSP 2055 >emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera] Length = 1491 Score = 59.3 bits (142), Expect = 8e-07 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 18/136 (13%) Frame = -1 Query: 623 IPSDGGANGDETGEIS---DLAEVSM------EKSESTEIVEDLAEASDKPTGNNNDPSA 471 +P A GDE G ++ D+ +++ EK+ +++E++AE SDK + + N+ A Sbjct: 1324 VPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDK-SNDGNEQIA 1382 Query: 470 SDLERSPQPSSKTREGSPSNITVSAV-TDPQTSVTT-AESEEQR-------SGQTISIRE 318 + +++P+ + + S S TV V Q S T A+ EE + S TI+++E Sbjct: 1383 VETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQE 1442 Query: 317 RARRNAMLRQAGIATP 270 RAR+ AMLRQAG+ +P Sbjct: 1443 RARQRAMLRQAGVLSP 1458