BLASTX nr result
ID: Dioscorea21_contig00022660
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00022660
(2271 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28171.3| unnamed protein product [Vitis vinifera] 263 2e-67
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera] 256 2e-65
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici... 240 1e-60
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin... 216 3e-53
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin... 207 7e-51
>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 263 bits (672), Expect = 2e-67
Identities = 192/539 (35%), Positives = 266/539 (49%), Gaps = 32/539 (5%)
Frame = -1
Query: 2169 DELLKKRTDCPFFITSPPTCDKGSECEFRHSETARLNPRECWYWLKGNCLNPTCAFRHPP 1990
DEL K+ TDC +F+ SP TC KG +CE+RHSE ARLNPR+CWYWL G+CLNP CAFRHPP
Sbjct: 3 DELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRHPP 62
Query: 1989 ---------------PHAPASVNKLNTPCYFFFNAICVKGDWCPFMHDTSSDQRIKKQFP 1855
H+ VNK NTPCYF++N C KG+ C F+H P
Sbjct: 63 LDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHG-----------P 111
Query: 1854 DTASIKAPETKTSIGSDTGPASVEVPANLLE--STSELNKHFYPEEVLGDPAPVNVFEDS 1681
D S G++TGP + N +E + + + F P+E L N FE S
Sbjct: 112 D-----------STGTETGPTLIGRRPNSVETATVTAIETQFQPKEDLQKLVFKNAFEQS 160
Query: 1680 RASAESSMPELEDPTLKLPENSLSPVEHVN-GLSTIMPDQSSEELMKEYAESDEGYMSSS 1504
+S + SM E E+ + +SL P E N S + DQSSEE + E +E + SS
Sbjct: 161 -SSPQISMSEYEE-AAAVRSDSLLPAEGFNQSRSLLSTDQSSEEQVDGPIEPEERWESSP 218
Query: 1503 GFDVLVDDGSE-LVYENDTDYLPFHEKDSERLHGHILQYDFEGSAGCVPQNYTDTGY--- 1336
GFDVLVD+ SE LVYE++ +YL E + L+G L YDFE P Y D Y
Sbjct: 219 GFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFED-----PVEY-DLMYPEA 272
Query: 1335 ---YENAIFEAYDHLGERYIPDYYHRVLENPXXXXXXXXXXXRLPLPMYYHKREPLPREH 1165
Y++ I++++D L + D+ + R+ P+ KR+ P E
Sbjct: 273 EILYDHRIYDSFDCLDNEHSSDHVRNI---------PGCSRERILDPILPRKRKNFPVEL 323
Query: 1164 AMGSGNAVDLRDHLKKRRKMEDRLPFYHSRRHPSYRDQQSSRERPARHLRDRRL----AS 997
A+ + +DLRD L+KRR + SRRH S +RER RH D++L AS
Sbjct: 324 AVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRSAS 383
Query: 996 EVGKTMTDSSVSENKSVLDNGHRES---RSGYPQFNXXXXXXXXXXXXXXRMKAPSAFSS 826
EV K + +SEN+++ + G+++ RS P+ SS
Sbjct: 384 EVRKNII-GMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGH--------SQRQHISS 434
Query: 825 KNLKATVSKESRDACAPADFTGPKTLAQIREEKTRMQSPGSHLGDPGTPHHRRIASVDF 649
++ + VS+E FTGPK+LAQI+EEK + + G G G + S DF
Sbjct: 435 EDSRKPVSRERISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMG--YSSNTPSADF 491
>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
Length = 554
Score = 256 bits (654), Expect = 2e-65
Identities = 191/565 (33%), Positives = 268/565 (47%), Gaps = 58/565 (10%)
Frame = -1
Query: 2169 DELLKKRTDCPFFITSPPTCDKGSECEFRHSETARLNPRECWYWLKGNCLNPTCAFRHP- 1993
DEL K+ TDC +F+ SP TC KG +CE+RHSE ARLNPR+CWYWL G+CLNP CAFRHP
Sbjct: 3 DELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRHPV 62
Query: 1992 -------------------------------------PPHAPASVNKLNTPCYFFFNAIC 1924
H+ VNK NTPCYF++N C
Sbjct: 63 RVMLKRIQRDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFC 122
Query: 1923 VKGDWCPFMHDTSSDQRIKKQFPDTASI---KAPETKTSIGSDTGPASVEVPANLLE--S 1759
KG+ C F+H S K + + + PE G++TGP + N +E +
Sbjct: 123 NKGERCSFLHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGRRPNSVETAT 182
Query: 1758 TSELNKHFYPEEVLGDPAPVNVFEDSRASAESSMPELEDPTLKLPENSLSPVEHVN-GLS 1582
+ + F P+E L N FE S +S + SM E E+ + +SL P E N S
Sbjct: 183 VTAIETQFQPKEDLQKLVFKNAFEQS-SSPQISMSEYEE-AAAVRSDSLLPAEGFNQSRS 240
Query: 1581 TIMPDQSSEELMKEYAESDEGYMSSSGFDVLVDDGSE-LVYENDTDYLPFHEKDSERLHG 1405
+ DQSSEE + E +E + SS GFDVLVD+ SE LVYE++ +YL E + L+G
Sbjct: 241 LLSTDQSSEEQVDGPIEPEERWESSPGFDVLVDNISENLVYEDEPEYLLALEGEGRELNG 300
Query: 1404 HILQYDFEGSAGCVPQNYTDTGY------YENAIFEAYDHLGERYIPDYYHRVLENPXXX 1243
L YDFE P Y D Y Y++ I++++D L + +++ +L P
Sbjct: 301 QFLGYDFED-----PVEY-DLMYPEAEILYDHRIYDSFDCLDNEHRREFW--ILFCPG-- 350
Query: 1242 XXXXXXXXRLPLPMYYHKREPLPREHAMGSGNAVDLRDHLKKRRKMEDRLPFYHSRRHPS 1063
KR+ P E A+ + +DLRD L+KRR + SRRH S
Sbjct: 351 -----------------KRKNFPVELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDS 393
Query: 1062 YRDQQSSRERPARHLRDRRL----ASEVGKTMTDSSVSENKSVLDNGHRES---RSGYPQ 904
+RER RH D++L ASEV K + +SEN+++ + G+++ RS P+
Sbjct: 394 SCLIGRTRERRRRHGMDQQLQGRSASEVRKNII-GMLSENETLSNRGNKQGWVRRSRLPK 452
Query: 903 FNXXXXXXXXXXXXXXRMKAPSAFSSKNLKATVSKESRDACAPADFTGPKTLAQIREEKT 724
SS++ + VS+E FTGPK+LAQI+EEK
Sbjct: 453 SRQHYKEKGH--------SQRQHISSEDSRKPVSRERISTREYTTFTGPKSLAQIKEEKR 504
Query: 723 RMQSPGSHLGDPGTPHHRRIASVDF 649
+ + G G G + S DF
Sbjct: 505 KAEENGEGFGKMG--YSSNTPSADF 527
>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536251|gb|EEF37903.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 530
Score = 240 bits (613), Expect = 1e-60
Identities = 183/532 (34%), Positives = 252/532 (47%), Gaps = 25/532 (4%)
Frame = -1
Query: 2169 DELLKKRTDCPFFITSPPTCDKGSECEFRHSETARLNPRECWYWLKGNCLNPTCAFRHP- 1993
+++ K+ TDC +F+ SP TC KG ECE+RH+E ARLNPR+CWYWL G+C NPTCAFRHP
Sbjct: 5 EDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFRHPP 64
Query: 1992 -------PPHAPAS---VNKLNTPCYFFFNAICVKGDWCPFMHDTSSDQRIKKQFPDTAS 1843
PP +S NK N PCYFFFN C KGD C FMH ++ K +++
Sbjct: 65 LEMHAEGPPELSSSSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEANSFTGKSGSTSSA 124
Query: 1842 IKAP---ETKTSIGSDTGPASVEVPANLLESTSELNK--HFYPEEVLGDPAPVNVFEDSR 1678
IK ++K S G+DT A EV AN E+ ++ K P E PAP S
Sbjct: 125 IKENIPLDSKISGGNDTVSAPTEVNANPSETAAKAVKDLKLQPYEDFQFPAPEKTVMRS- 183
Query: 1677 ASAESSMPELEDPTLKLPENSLSPVEHVNGLSTIMPDQSSEELMKEYAESDEGYMSSSGF 1498
S + ++ + E+ + P L S QS EE M ++ E +E + SS GF
Sbjct: 184 PSPQIAVSQSEEAVILNPSFLLKVNSFTESRSLAYTTQSPEEEMDDHVEPEERWESSPGF 243
Query: 1497 DVLVDDGSE-LVYENDTDYLPFHEKDSERLHGHILQYDFEGSAGCVPQNYTDTGYYENAI 1321
DVLVDD SE L YE+D +YL + + + L YDFE Y++A
Sbjct: 244 DVLVDDKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLV-----------EYDHAY 292
Query: 1320 FEAYDHLGE-RY-IPDYYHRVLENPXXXXXXXXXXXRLPLPMYYHKREPLPREHAMGSGN 1147
+A D G +Y D+ V + + KR+ + E ++
Sbjct: 293 HDAEDDYGSGKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSINDQR 352
Query: 1146 AVDLRDHLKKRRKMEDRLPFYHSRRHPSYRDQQSSRERPARHLRDR-RLASEVGKTMTDS 970
VDLRD L K R + SRRH S + RP + R +L EV T +
Sbjct: 353 IVDLRDRLGKDRAIHGHTVIRSSRRHYSSHLLGHGQGRPGSNQRPHGKLVLEVKSTAIEP 412
Query: 969 SVSENKSVLDNGH-----RESRSGYPQFNXXXXXXXXXXXXXXRMKAPSAFSSKNLKATV 805
+N S L G+ R SRS + R+ + SS+ L+
Sbjct: 413 H-RKNGSQLYGGNDHGWLRHSRSNRSR----------QRDKERRLARKQSLSSEVLRKPA 461
Query: 804 SKESRDACAPADFTGPKTLAQIREEKTRMQSPGSHLGDPGTPHHRRIASVDF 649
SKE + + A FTGPKTLAQI+EEK + + G + G T + R+A+ DF
Sbjct: 462 SKERKSSQASTQFTGPKTLAQIKEEKKKAEENGDYTGK--TDNSSRMATADF 511
>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 526
Score = 216 bits (549), Expect = 3e-53
Identities = 174/522 (33%), Positives = 242/522 (46%), Gaps = 30/522 (5%)
Frame = -1
Query: 2178 MDNDELLKKRTDCPFFITSPPTCDKGSECEFRHSETARLNPRECWYWLKGNCLNPTCAFR 1999
MD D L K+ TDC +F+ SP TC KG+ECE+RH+E ARLNPR+CWYWL G CLNPTCAFR
Sbjct: 1 MDEDSL-KRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFR 59
Query: 1998 HPP---------PHAPASV----NKLNTPCYFFFNAICVKGDWCPFMHDTSSD----QRI 1870
HPP P P NK PCYFFFN C KGD C F+H + +
Sbjct: 60 HPPLDGHTGAPVPSEPTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDDSIFNIKPV 119
Query: 1869 KKQFPDTASI----KAPE-TKTSIGSDTGPASVEVPANLLESTSELNKHFYPEEVLGDPA 1705
K + T ++ KAP +T + S SV P NL S+L KH P+E
Sbjct: 120 KNENGSTDALNLENKAPSGNRTGVTSTPTDRSVAAPKNL----SDL-KH-QPKEDHQLEL 173
Query: 1704 PVNVFEDSRASAESSMPELEDPTLKLPENSLSPVEHVNGLSTIMPDQSSEELMKEYAESD 1525
P NV + E S E ++ + ++S+ V+ + + QSSEE + + E +
Sbjct: 174 PKNVKQQGDY-LELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTGQSSEEQVNSHIEPE 232
Query: 1524 EGYMSSS---GFDVLVDDGSE-LVYENDTDYLPFHEKDSERLHGHILQYDFEGSAGCVPQ 1357
E + SS GFDVLV D E L YE D++YLP ++D + L+ +Y+F P
Sbjct: 233 EWWESSPHSPGFDVLVHDEVENLGYEEDSEYLPVVDRDEQELNDQYFRYEFID-----PV 287
Query: 1356 NYTDTGYYENAIFEAYDHLGERYIPDYYHRVLENPXXXXXXXXXXXRLPLPMYYHKREPL 1177
Y + ++E + G R + R L + P+ KR
Sbjct: 288 EYDTICPEADILYEQETYDGYRCLD----RDLIHVNGRTVHAYATDAFLDPILSRKRIRT 343
Query: 1176 PREHAMGSGNAVDLRDHLKKRRKMEDRLPFYHSRRHPSYRDQQSSRERPARH----LRDR 1009
E A N +DLRDHL++RR++ RR S ++ER RH R
Sbjct: 344 SAEMAAYDKN-LDLRDHLRRRREVNGPPVTGFLRRQESSPLMVQNQERHLRHGIEQRPSR 402
Query: 1008 RLASEVGKTMTDSSVSENKSVLDNGHRESRSGYPQFNXXXXXXXXXXXXXXRMKAPSAFS 829
RL S++G + DS+ + N R R Q + + S
Sbjct: 403 RLTSQLGYSAIDSTGEVETLSIGNKRRLFRQSQAQQHRPRKNYIEKLPKRQFV------S 456
Query: 828 SKNLKATVSKESRDACAPADFTGPKTLAQIREEKTRMQSPGS 703
SK + V K+ + F+GPKTLA+I+EEK + + GS
Sbjct: 457 SKISRKPVFKQRGLIHESSTFSGPKTLAEIKEEKMKKNAEGS 498
>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 524
Score = 207 bits (528), Expect = 7e-51
Identities = 165/516 (31%), Positives = 234/516 (45%), Gaps = 23/516 (4%)
Frame = -1
Query: 2178 MDNDELLKKRTDCPFFITSPPTCDKGSECEFRHSETARLNPRECWYWLKGNCLNPTCAFR 1999
MD D L K+ TDC +F+ SP TC KG+ECE+RH+E ARLNPR+CWYWL G CLNPTCAFR
Sbjct: 1 MDQDSL-KRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFR 59
Query: 1998 HPP--PHAPASV-----------NKLNTPCYFFFNAICVKGDWCPFMH-DTSSDQRIKKQ 1861
HPP H ASV NK PCYFFFN C KGD C F+H S +K
Sbjct: 60 HPPLDGHTGASVPSEPTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDDSIFTVKPV 119
Query: 1860 FPDTASIKA--PETKTSIGSDTGPASVEVPANLLESTSELNKHFYPEEVLGDPAPVNVFE 1687
D S A E KTS G+ G S ++ + + P+E P +V +
Sbjct: 120 KNDNGSTDALNLENKTSSGNRIGLVSTPTDQSVAAPKNLSDLKLQPKEDHQLEIPKDV-K 178
Query: 1686 DSRASAESSMPELEDPTLKLPENSLSPVEHVNGLSTIMPDQSSEELMKEYAESDEGYMS- 1510
E S E ++ + ++S+ V+ + + +QSSEE + + E +E + S
Sbjct: 179 QQGYYLELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTEQSSEEQVNSHIEPEERWESS 238
Query: 1509 --SSGFDVLV-DDGSELVYENDTDYLPFHEKDSERLHGHILQYDFEGSAGCVPQNYTDTG 1339
S GFDVLV D+ L YE D++Y+ ++D + L Y+F+ S Y
Sbjct: 239 PHSPGFDVLVHDEVDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSV-----EYDTIC 293
Query: 1338 YYENAIFEAYDHLGERYIPDYYHRVLENPXXXXXXXXXXXRLPLPMYYHKREPLPREHAM 1159
+ ++E + G R++ R L + P KR + E A
Sbjct: 294 PEADILYEQETYDGYRFL----DRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEMAA 349
Query: 1158 GSGNAVDLRDHLKKRRKMEDRLPFYHSRRHPS---YRDQQSSRERPARHLRDRRLASEVG 988
N +DLRDHL++RR+++ RR S R Q+ + RRL S++G
Sbjct: 350 YDKN-LDLRDHLRRRREIKGPPVSNFLRRESSPLMIRKQERHQRHGIEQRPIRRLTSQLG 408
Query: 987 KTMTDSSVSENKSVLDNGHRESRSGYPQFNXXXXXXXXXXXXXXRMKAPSAFSSKNLKAT 808
+ DS + N HR R Q ++ SSK +
Sbjct: 409 YSAIDSIGEVGTLSVANKHRLFRHSQAQ------QHKPRKHYREKLPKRQFLSSKISRKP 462
Query: 807 VSKESRDACAPADFTGPKTLAQIREEKTRMQSPGSH 700
K+ + F+GPKTLA+I+EEK + H
Sbjct: 463 AFKQRGFIHEFSAFSGPKTLAEIKEEKMKKAEGSLH 498