BLASTX nr result

ID: Dioscorea21_contig00022649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022649
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD53905.1| RING zinc finger protein-like [Oryza sativa Japo...    82   3e-14
ref|NP_001058454.2| Os06g0695900 [Oryza sativa Japonica Group] g...    82   3e-14
emb|CBI17870.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...    81   1e-13
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...    81   1e-13

>dbj|BAD53905.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
           gi|53793216|dbj|BAD54441.1| RING zinc finger
           protein-like [Oryza sativa Japonica Group]
          Length = 425

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
 Frame = -1

Query: 309 RPSIAIIVGVXXXXXXXXXXXXLYAKHCKNN------PH-SRRLDPSSSSTYAAPRRNSG 151
           RP +A++VG+            LYAKHCK N      P+ S     SS    A  RRNSG
Sbjct: 59  RPGVAVVVGILTSVFSITFLLLLYAKHCKRNAAESSGPYGSGGAFGSSGGGGAGERRNSG 118

Query: 150 LSPALIDALPAFRFSSLRCPSAKTSLLDCAVCLSSFLPSDPLRLLPRCRH 1
           +  A++++LP FRF +LR   A    L+CAVCL  F P++ LRLLP+CRH
Sbjct: 119 VDRAVVESLPVFRFGALRGQKAG---LECAVCLGRFEPTEALRLLPKCRH 165


>ref|NP_001058454.2| Os06g0695900 [Oryza sativa Japonica Group]
           gi|222636150|gb|EEE66282.1| hypothetical protein
           OsJ_22489 [Oryza sativa Japonica Group]
           gi|255677351|dbj|BAF20368.2| Os06g0695900 [Oryza sativa
           Japonica Group]
          Length = 398

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
 Frame = -1

Query: 309 RPSIAIIVGVXXXXXXXXXXXXLYAKHCKNN------PH-SRRLDPSSSSTYAAPRRNSG 151
           RP +A++VG+            LYAKHCK N      P+ S     SS    A  RRNSG
Sbjct: 32  RPGVAVVVGILTSVFSITFLLLLYAKHCKRNAAESSGPYGSGGAFGSSGGGGAGERRNSG 91

Query: 150 LSPALIDALPAFRFSSLRCPSAKTSLLDCAVCLSSFLPSDPLRLLPRCRH 1
           +  A++++LP FRF +LR   A    L+CAVCL  F P++ LRLLP+CRH
Sbjct: 92  VDRAVVESLPVFRFGALRGQKAG---LECAVCLGRFEPTEALRLLPKCRH 138


>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
 Frame = -1

Query: 309 RPSIAIIVGVXXXXXXXXXXXXLYAKHCK--NNPHSRRLDPSSSSTYAAPRRNSGLSPAL 136
           RPSIA+IVGV            LYAKHCK  N        P SS    A R+NSG+   +
Sbjct: 53  RPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLSS----AARKNSGIDRTV 108

Query: 135 IDALPAFRFSSLRCPSAKTSLLDCAVCLSSFLPSDPLRLLPRCRH 1
           I++LP FRF+SLR    +   L+CAVCL+ F P++ LRLLP+C+H
Sbjct: 109 IESLPVFRFASLR---GQKDGLECAVCLNRFEPTEILRLLPKCKH 150


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
 Frame = -1

Query: 309 RPSIAIIVGVXXXXXXXXXXXXLYAKHCK--NNPHSRRLDPSSSSTYAAPRRNSGLSPAL 136
           RPSIA+IVGV            LYAKHCK  N        P SS    A R+NSG+   +
Sbjct: 53  RPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLSS----AARKNSGIDRTV 108

Query: 135 IDALPAFRFSSLRCPSAKTSLLDCAVCLSSFLPSDPLRLLPRCRH 1
           I++LP FRF+SLR    +   L+CAVCL+ F P++ LRLLP+C+H
Sbjct: 109 IESLPVFRFASLR---GQKDGLECAVCLNRFEPTEILRLLPKCKH 150


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
 Frame = -1

Query: 309 RPSIAIIVGVXXXXXXXXXXXXLYAKHCKNNPHSRRLDPSSSST---YAAPRRNSGLSPA 139
           +PSIA+IVGV            LYAKHCK        +     T    A  R+NSG+  A
Sbjct: 76  KPSIAVIVGVLTTMFSITLLLLLYAKHCKRAHIYNSFNNGGGGTGGQTAEARKNSGIDRA 135

Query: 138 LIDALPAFRFSSLRCPSAKTSLLDCAVCLSSFLPSDPLRLLPRCRH 1
           +I++LP FRFSSLR    +   L+CAVCL+ F P + LRLLP+C+H
Sbjct: 136 VIESLPIFRFSSLR---GQKDGLECAVCLTRFEPPEVLRLLPKCKH 178


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