BLASTX nr result

ID: Dioscorea21_contig00022640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022640
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532039.1| PREDICTED: paired amphipathic helix protein ...    64   1e-08
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...    63   3e-08
emb|CBI32068.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_004155336.1| PREDICTED: LOW QUALITY PROTEIN: paired amphi...    61   8e-08
ref|XP_004135217.1| PREDICTED: LOW QUALITY PROTEIN: paired amphi...    61   8e-08

>ref|XP_003532039.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like
           [Glycine max]
          Length = 1404

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = -2

Query: 214 VYSEVADLFGEHPDLLNEFTHFLPDTSAVATAQHGSSARTLLPGFKFNSPV-------QK 56
           VY EVA LF +H DLL EFTHFLPDTS  A+   G +  +LLP      P+       ++
Sbjct: 168 VYKEVAALFQDHVDLLREFTHFLPDTSGTASNHCGLARNSLLPDRSSAMPIIRQMHVEKR 227

Query: 55  EGTYNSQTDRELSVDHLD 2
           E    S  DR+LS DH D
Sbjct: 228 ERNIASHGDRDLSADHPD 245


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
           vinifera]
          Length = 1421

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
 Frame = -2

Query: 214 VYSEVADLFGEHPDLLNEFTHFLPDTSAVATAQHGSSAR--------TLLPGFKFNSPVQ 59
           VY EVA LF +HPDLL EFTHFLPDTSA +T Q+  S R        +L+P  +     +
Sbjct: 169 VYQEVAALFHDHPDLLVEFTHFLPDTSAAST-QYAPSGRNPMHRERGSLVPPLRQILTDK 227

Query: 58  KEGTYNSQTDRELSVDHLD 2
           KE    S  DR+LSVD  D
Sbjct: 228 KERITASHADRDLSVDRPD 246


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
 Frame = -2

Query: 214 VYSEVADLFGEHPDLLNEFTHFLPDTSAVATAQHGSSAR--------TLLPGFKFNSPVQ 59
           VY EVA LF +HPDLL EFTHFLPDTSA +T Q+  S R        +L+P  +     +
Sbjct: 169 VYQEVAALFHDHPDLLVEFTHFLPDTSAAST-QYAPSGRNPMHRERGSLVPPLRQILTDK 227

Query: 58  KEGTYNSQTDRELSVDHLD 2
           KE    S  DR+LSVD  D
Sbjct: 228 KERITASHADRDLSVDRPD 246


>ref|XP_004155336.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3-like 4-like [Cucumis sativus]
          Length = 1419

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
 Frame = -2

Query: 214 VYSEVADLFGEHPDLLNEFTHFLPDTSAVATAQHGSSARTL--------LPGFKFNSPVQ 59
           VY EVA LF EHPDLL EFTHFLPD+SA  +  H SS R L        +P  +     +
Sbjct: 169 VYQEVAALFQEHPDLLVEFTHFLPDSSATGSV-HYSSGRGLMLRDRHSAMPSMRQMQVDR 227

Query: 58  KEGTYNSQTDRELSVD 11
           K+ T  S  +R+LSVD
Sbjct: 228 KDRTIASHAERDLSVD 243


>ref|XP_004135217.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3-like 4-like [Cucumis sativus]
          Length = 1397

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
 Frame = -2

Query: 214 VYSEVADLFGEHPDLLNEFTHFLPDTSAVATAQHGSSARTL--------LPGFKFNSPVQ 59
           VY EVA LF EHPDLL EFTHFLPD+SA  +  H SS R L        +P  +     +
Sbjct: 139 VYQEVAALFQEHPDLLVEFTHFLPDSSATGSV-HYSSGRGLMLRDRHSAMPSMRQMQVDR 197

Query: 58  KEGTYNSQTDRELSVD 11
           K+ T  S  +R+LSVD
Sbjct: 198 KDRTIASHAERDLSVD 213


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