BLASTX nr result

ID: Dioscorea21_contig00022625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022625
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266374.1| PREDICTED: derlin-1.1-like [Vitis vinifera]       173   1e-41
ref|XP_002309232.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
gb|ABK93254.1| unknown [Populus trichocarpa]                          170   1e-40
ref|XP_002514197.1| Derlin-3, putative [Ricinus communis] gi|223...   169   2e-40
ref|XP_002328829.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>ref|XP_002266374.1| PREDICTED: derlin-1.1-like [Vitis vinifera]
          Length = 276

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/127 (62%), Positives = 101/127 (79%)
 Frame = +3

Query: 9   MSSPTEYYKSLPPVIKTYGVLCLMTTTAYYFNLFDYVTISLSYVHILKQFQVWRLVTNFF 188
           MS+P EYY+SLPPV K YGV CL+TTTAYY  L+    I+LSY  + K+FQVWRLVTNFF
Sbjct: 1   MSTPAEYYRSLPPVSKVYGVACLLTTTAYYLQLYHPWNIALSYELVFKRFQVWRLVTNFF 60

Query: 189 FIAPFSTYFGIRLLMLARYGVLLEKGPFKERTADFLWMMIFGALSLLMINMIPIFRSWFL 368
           F+ PFS  F +RLL++ARYGV LE+GPF +RTAD++WM+I GALSLL++ ++P   SWF+
Sbjct: 61  FLGPFSLSFALRLLIIARYGVSLERGPFDKRTADYVWMLISGALSLLVMAVVPYLWSWFM 120

Query: 369 APSLVFM 389
             SLVFM
Sbjct: 121 GASLVFM 127


>ref|XP_002309232.1| predicted protein [Populus trichocarpa] gi|222855208|gb|EEE92755.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  170 bits (430), Expect = 1e-40
 Identities = 85/127 (66%), Positives = 95/127 (74%)
 Frame = +3

Query: 9   MSSPTEYYKSLPPVIKTYGVLCLMTTTAYYFNLFDYVTISLSYVHILKQFQVWRLVTNFF 188
           MSSP EYYKSLPP+ K YG LCL  TTA  F L     I+L Y  +   FQVWRL+T FF
Sbjct: 1   MSSPAEYYKSLPPISKAYGTLCLFLTTAVQFGLLYLPDIALMYKPVFSSFQVWRLITTFF 60

Query: 189 FIAPFSTYFGIRLLMLARYGVLLEKGPFKERTADFLWMMIFGALSLLMINMIPIFRSWFL 368
           F+  FS  FGIRLLM+ARYGV LEKGPF+ RTADFLWMMIFGALSLL+++ IPIF S FL
Sbjct: 61  FLGNFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFWSPFL 120

Query: 369 APSLVFM 389
             SLVFM
Sbjct: 121 GISLVFM 127


>gb|ABK93254.1| unknown [Populus trichocarpa]
          Length = 176

 Score =  170 bits (430), Expect = 1e-40
 Identities = 85/127 (66%), Positives = 95/127 (74%)
 Frame = +3

Query: 9   MSSPTEYYKSLPPVIKTYGVLCLMTTTAYYFNLFDYVTISLSYVHILKQFQVWRLVTNFF 188
           MSSP EYYKSLPP+ K YG LCL  TTA  F L     I+L Y  +   FQVWRL+T FF
Sbjct: 1   MSSPAEYYKSLPPISKVYGTLCLFLTTAVQFGLLYLPDIALMYKPVFSSFQVWRLITTFF 60

Query: 189 FIAPFSTYFGIRLLMLARYGVLLEKGPFKERTADFLWMMIFGALSLLMINMIPIFRSWFL 368
           F+  FS  FGIRLLM+ARYGV LEKGPF+ RTADFLWMMIFGALSLL+++ IPIF S FL
Sbjct: 61  FLGNFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFWSPFL 120

Query: 369 APSLVFM 389
             SLVFM
Sbjct: 121 GISLVFM 127


>ref|XP_002514197.1| Derlin-3, putative [Ricinus communis] gi|223546653|gb|EEF48151.1|
           Derlin-3, putative [Ricinus communis]
          Length = 206

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/127 (64%), Positives = 95/127 (74%)
 Frame = +3

Query: 9   MSSPTEYYKSLPPVIKTYGVLCLMTTTAYYFNLFDYVTISLSYVHILKQFQVWRLVTNFF 188
           MSSP EYY SLPP+ K YG LCL  T AY   +FD V I+L Y  +  +FQVWRL TNFF
Sbjct: 1   MSSPAEYYNSLPPITKAYGTLCLFFTAAYQLGVFDLVHIALIYQLVFSRFQVWRLFTNFF 60

Query: 189 FIAPFSTYFGIRLLMLARYGVLLEKGPFKERTADFLWMMIFGALSLLMINMIPIFRSWFL 368
           F+  FS  FGIRLLM+ARYGV LEKGPF  RTADFLWM+IFGALS+L+++ IP F + FL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLEKGPFDRRTADFLWMVIFGALSMLILSAIPFFWTPFL 120

Query: 369 APSLVFM 389
             SLVFM
Sbjct: 121 GTSLVFM 127


>ref|XP_002328829.1| predicted protein [Populus trichocarpa] gi|222839127|gb|EEE77478.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  166 bits (419), Expect = 2e-39
 Identities = 77/127 (60%), Positives = 97/127 (76%)
 Frame = +3

Query: 9   MSSPTEYYKSLPPVIKTYGVLCLMTTTAYYFNLFDYVTISLSYVHILKQFQVWRLVTNFF 188
           MS+P EYY+SLPPV K YGV CLMTT AYY  L+   +I+L Y  ++K+FQVWRL+TNFF
Sbjct: 1   MSTPGEYYRSLPPVSKAYGVACLMTTAAYYLGLYQASSIALYYDDVIKRFQVWRLITNFF 60

Query: 189 FIAPFSTYFGIRLLMLARYGVLLEKGPFKERTADFLWMMIFGALSLLMINMIPIFRSWFL 368
           F+ PFS  F  RL+++ARYGV LE+GPF +RTADF+WM  FGALSLL++  +P   S F+
Sbjct: 61  FLGPFSFPFAFRLIIIARYGVQLERGPFDKRTADFVWMFFFGALSLLVMAAVPFLWSGFM 120

Query: 369 APSLVFM 389
             SLVFM
Sbjct: 121 GVSLVFM 127


Top