BLASTX nr result

ID: Dioscorea21_contig00022617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022617
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446671.1| hypothetical protein SORBIDRAFT_06g020190 [S...   318   1e-84
emb|CAH66875.1| OSIGBa0158F13.6 [Oryza sativa Indica Group]           317   4e-84
ref|NP_001053100.1| Os04g0480300 [Oryza sativa Japonica Group] g...   317   5e-84
emb|CAE05892.1| OSJNBa0044K18.33 [Oryza sativa Japonica Group]        317   5e-84
ref|XP_003579976.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   310   5e-82

>ref|XP_002446671.1| hypothetical protein SORBIDRAFT_06g020190 [Sorghum bicolor]
            gi|241937854|gb|EES10999.1| hypothetical protein
            SORBIDRAFT_06g020190 [Sorghum bicolor]
          Length = 555

 Score =  318 bits (816), Expect = 1e-84
 Identities = 182/366 (49%), Positives = 227/366 (62%), Gaps = 13/366 (3%)
 Frame = -2

Query: 1062 SDRELYTIPASSSWFQWDEIHETERRSIPEFFDGS------SVSKNPRVYKEYRDFIISK 901
            S RELYTIPASS WF+WD IHETER+++PEFF G+      + ++NPR+Y+EYRDFII+K
Sbjct: 16   SPRELYTIPASSGWFRWDGIHETERQALPEFFGGAGGAGFGTATRNPRIYREYRDFIIAK 75

Query: 900  YREEPSRRLTFTEVRKSLVGDVGALHRVFLFLDRWGLINFGAPAVEARDDGRTAVTVSSV 721
            YRE+P+RRLTFTEVR++LVGDV  L ++F FLD  GLINF A +  +    R    V  V
Sbjct: 76   YREDPARRLTFTEVRRALVGDVTLLRKLFAFLDSSGLINFSASSSSSGPASRKQ-EVGVV 134

Query: 720  VEEGVPAGLRIVP---ASAVAGGAQGSTAGG-ESGFRLPPLTSYTDAFADWXXXXXXXXX 553
            VE   P GL++ P   AS  A   +G+  G  E+GFRLPPLTSY+D F +W         
Sbjct: 135  VE--APVGLQVTPRPPASYFAEEKRGAVGGEKENGFRLPPLTSYSDVFGEWAPGKAPICG 192

Query: 552  XXGNHCQHGQYEKTMDGFFKCQKCSL---DNGNGEGKSGDGSKTNDHMNGNGDIGTRSWT 382
              G  C   + E   DGF  C KCS    DN   E     G K       +G     +WT
Sbjct: 193  FCGEECNGAKVETLQDGFKVCSKCSKSNNDNNKEEANKCPGDKKESMEKSSG-----AWT 247

Query: 381  DAETLLLLEAVMKHGDDWNLIAQHVRTKNKIDCIARLVQLPFGEHILGTINGKCEIRNSS 202
            DAETLLLLE V+KHGDDW+LIAQHVRTKNK +CIARL+QLPFGEH+LGTINGK   R   
Sbjct: 248  DAETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTINGKSASRLHI 307

Query: 201  SQAANIRTIHHGTIENSQEIMSTEDKPDIQNDEEKVVEESCAAPPLKKRRKQSIIDATDS 22
            +QA + +T  H   E S       D   I  +E+   ++S    P K+RR  S +DAT S
Sbjct: 308  NQATDGKTNQHIMKEPSSHTTEMADGMQIDGNEDS-ADKSVEEYPTKRRRLFSSMDATTS 366

Query: 21   LMQTVA 4
            LM+ +A
Sbjct: 367  LMEQLA 372


>emb|CAH66875.1| OSIGBa0158F13.6 [Oryza sativa Indica Group]
          Length = 564

 Score =  317 bits (812), Expect = 4e-84
 Identities = 178/359 (49%), Positives = 222/359 (61%), Gaps = 8/359 (2%)
 Frame = -2

Query: 1056 RELYTIPASSSWFQWDEIHETERRSIPEFFDGS------SVSKNPRVYKEYRDFIISKYR 895
            RELYTIPASS WFQWDEIHETERR++PEFF G+      + S+NPR+Y+EYRD+IIS+YR
Sbjct: 21   RELYTIPASSGWFQWDEIHETERRALPEFFGGAGGSGFGTASRNPRIYREYRDYIISRYR 80

Query: 894  EEPSRRLTFTEVRKSLVGDVGALHRVFLFLDRWGLINFGAPAVEARDDGRTAVTVSSVVE 715
            E+ SRRLTFTEVRK+LVGDV  L ++F FLD  GLINF A         +   T +  V 
Sbjct: 81   EDTSRRLTFTEVRKALVGDVTLLRKLFAFLDSSGLINFSASPSRPEAQQQQRQTEAEAVV 140

Query: 714  EGVPAGLRIVPASAVAGGAQGSTAGG-ESGFRLPPLTSYTDAFADWXXXXXXXXXXXGNH 538
            E  P GL++ P    +  A+    GG E+GFRLPPLTSY+D F +W           G  
Sbjct: 141  EA-PVGLQVTPRPPPSYFAEEKGGGGNENGFRLPPLTSYSDVFGEWAPGMAPICGLCGME 199

Query: 537  CQHGQYEKTMDGFFKCQKCSLDNGN-GEGKSGDGSKTNDHMNGNGDIGTRSWTDAETLLL 361
            C+ G  +   DGF  C KC  +N N GE     G K     N +      +WTDAETLLL
Sbjct: 200  CRDGNAQILKDGFKVCSKCYANNDNKGEANIHPGDKKERIDNHSSS----AWTDAETLLL 255

Query: 360  LEAVMKHGDDWNLIAQHVRTKNKIDCIARLVQLPFGEHILGTINGKCEIRNSSSQAANIR 181
            LE V+KHGDDW+LIAQHVRTKNK +CIARL+QLPFGEH+LGT+NGK + R    Q  + +
Sbjct: 256  LEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTVNGKLDNRLHKIQTTDGK 315

Query: 180  TIHHGTIENSQEIMSTEDKPDIQNDEEKVVEESCAAPPLKKRRKQSIIDATDSLMQTVA 4
                   E+S +   T D   I  +E+   ++S    P K RR  S ID T SLM+ +A
Sbjct: 316  VNKSTVKESSSQPTETVDDMQIDGNEDG-ADKSVEEHPTKHRRLFSSIDTTVSLMEQLA 373


>ref|NP_001053100.1| Os04g0480300 [Oryza sativa Japonica Group]
            gi|113564671|dbj|BAF15014.1| Os04g0480300 [Oryza sativa
            Japonica Group] gi|215734840|dbj|BAG95562.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 560

 Score =  317 bits (811), Expect = 5e-84
 Identities = 178/359 (49%), Positives = 222/359 (61%), Gaps = 8/359 (2%)
 Frame = -2

Query: 1056 RELYTIPASSSWFQWDEIHETERRSIPEFFDGS------SVSKNPRVYKEYRDFIISKYR 895
            RELYTIPASS WFQWDEIHETERR++PEFF G+      + S+NPR+Y+EYRD+IIS+YR
Sbjct: 21   RELYTIPASSGWFQWDEIHETERRALPEFFGGAGGSGFGTASRNPRIYREYRDYIISRYR 80

Query: 894  EEPSRRLTFTEVRKSLVGDVGALHRVFLFLDRWGLINFGAPAVEARDDGRTAVTVSSVVE 715
            E+ SRRLTFTEVRK+LVGDV  L ++F FLD  GLINF A         +   T +  V 
Sbjct: 81   EDTSRRLTFTEVRKALVGDVTLLRKLFAFLDSSGLINFSASPSRPEAQQQQRQTEAEAVV 140

Query: 714  EGVPAGLRIVPASAVAGGAQGSTAGG-ESGFRLPPLTSYTDAFADWXXXXXXXXXXXGNH 538
            E  P GL++ P    +  A+    GG E+GFRLPPLTSY+D F +W           G  
Sbjct: 141  EA-PVGLQVTPRPPPSYFAEEKGGGGNENGFRLPPLTSYSDVFGEWAPGMAPICGLCGME 199

Query: 537  CQHGQYEKTMDGFFKCQKCSLDNGN-GEGKSGDGSKTNDHMNGNGDIGTRSWTDAETLLL 361
            C+ G  +   DGF  C KC  +N N GE     G K     N +      +WTDAETLLL
Sbjct: 200  CRDGNAQILKDGFKVCSKCYANNDNKGEANIHPGDKKERIDNHSSS----AWTDAETLLL 255

Query: 360  LEAVMKHGDDWNLIAQHVRTKNKIDCIARLVQLPFGEHILGTINGKCEIRNSSSQAANIR 181
            LE V+KHGDDW+LIAQHVRTKNK +CIARL+QLPFGEH+LGT+NGK + R    Q  + +
Sbjct: 256  LEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTVNGKLDNRLHKIQTTDGK 315

Query: 180  TIHHGTIENSQEIMSTEDKPDIQNDEEKVVEESCAAPPLKKRRKQSIIDATDSLMQTVA 4
                   E+S +   T D   I  +E+   ++S    P K RR  S ID T SLM+ +A
Sbjct: 316  VNKSTVKESSSQPTETVDDMQIDGNEDG-ADKSVEEHPTKHRRLFSSIDITVSLMEQLA 373


>emb|CAE05892.1| OSJNBa0044K18.33 [Oryza sativa Japonica Group]
          Length = 891

 Score =  317 bits (811), Expect = 5e-84
 Identities = 178/359 (49%), Positives = 222/359 (61%), Gaps = 8/359 (2%)
 Frame = -2

Query: 1056 RELYTIPASSSWFQWDEIHETERRSIPEFFDGS------SVSKNPRVYKEYRDFIISKYR 895
            RELYTIPASS WFQWDEIHETERR++PEFF G+      + S+NPR+Y+EYRD+IIS+YR
Sbjct: 21   RELYTIPASSGWFQWDEIHETERRALPEFFGGAGGSGFGTASRNPRIYREYRDYIISRYR 80

Query: 894  EEPSRRLTFTEVRKSLVGDVGALHRVFLFLDRWGLINFGAPAVEARDDGRTAVTVSSVVE 715
            E+ SRRLTFTEVRK+LVGDV  L ++F FLD  GLINF A         +   T +  V 
Sbjct: 81   EDTSRRLTFTEVRKALVGDVTLLRKLFAFLDSSGLINFSASPSRPEAQQQQRQTEAEAVV 140

Query: 714  EGVPAGLRIVPASAVAGGAQGSTAGG-ESGFRLPPLTSYTDAFADWXXXXXXXXXXXGNH 538
            E  P GL++ P    +  A+    GG E+GFRLPPLTSY+D F +W           G  
Sbjct: 141  EA-PVGLQVTPRPPPSYFAEEKGGGGNENGFRLPPLTSYSDVFGEWAPGMAPICGLCGME 199

Query: 537  CQHGQYEKTMDGFFKCQKCSLDNGN-GEGKSGDGSKTNDHMNGNGDIGTRSWTDAETLLL 361
            C+ G  +   DGF  C KC  +N N GE     G K     N +      +WTDAETLLL
Sbjct: 200  CRDGNAQILKDGFKVCSKCYANNDNKGEANIHPGDKKERIDNHSSS----AWTDAETLLL 255

Query: 360  LEAVMKHGDDWNLIAQHVRTKNKIDCIARLVQLPFGEHILGTINGKCEIRNSSSQAANIR 181
            LE V+KHGDDW+LIAQHVRTKNK +CIARL+QLPFGEH+LGT+NGK + R    Q  + +
Sbjct: 256  LEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTVNGKLDNRLHKIQTTDGK 315

Query: 180  TIHHGTIENSQEIMSTEDKPDIQNDEEKVVEESCAAPPLKKRRKQSIIDATDSLMQTVA 4
                   E+S +   T D   I  +E+   ++S    P K RR  S ID T SLM+ +A
Sbjct: 316  VNKSTVKESSSQPTETVDDMQIDGNEDG-ADKSVEEHPTKHRRLFSSIDITVSLMEQLA 373


>ref|XP_003579976.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Brachypodium
            distachyon]
          Length = 558

 Score =  310 bits (794), Expect = 5e-82
 Identities = 175/367 (47%), Positives = 228/367 (62%), Gaps = 16/367 (4%)
 Frame = -2

Query: 1056 RELYTIPASSSWFQWDEIHETERRSIPEFFDG------SSVSKNPRVYKEYRDFIISKYR 895
            RELYTIPASSSWF+WD+IHETER ++PEFF G       + S+NPR+Y+EYRD+II+KYR
Sbjct: 21   RELYTIPASSSWFRWDDIHETERSALPEFFGGPGGNSYGTASRNPRIYREYRDYIINKYR 80

Query: 894  EEPSRRLTFTEVRKSLVGDVGALHRVFLFLDRWGLINFGA--PAVEARDDGRTAVTVSSV 721
            E+P+RRLTFTEVRK+LVGD   L ++F FLD  GLINF A  P   A+  G  AV  +  
Sbjct: 81   EDPARRLTFTEVRKALVGDATLLRKLFGFLDSSGLINFSATSPRPVAQQPGLDAVLEA-- 138

Query: 720  VEEGVPAGLRIVPASAVAGGAQGSTAGG--ESGFRLPPLTSYTDAFADWXXXXXXXXXXX 547
                 P GL++ P   V+   +    GG  E+ FRLPPL+SY D F +W           
Sbjct: 139  -----PVGLQVTPRPQVSYSVEERFGGGTGENVFRLPPLSSYVDVFGEWAPGKGPICAFC 193

Query: 546  GNHCQHGQYEKTMDGFFKCQKCSLDNGNGEGKS---GDGSKTNDHMNGNGDIGTRSWTDA 376
            G  C+ G+ E   DGF  C  C   N + E  +   GD  ++ D+        + +WTDA
Sbjct: 194  GVECKDGKVETLEDGFKVCSTCCKTNSDNEEANKCAGDKKESADNH------ASSAWTDA 247

Query: 375  ETLLLLEAVMKHGDDWNLIAQHVRTKNKIDCIARLVQLPFGEHILGTINGKCEIRNSSSQ 196
            ETLLLLE V+KHGDDW+LI QHVRTKNK++CIARL+QLPFGEH+LG INGK + R  +SQ
Sbjct: 248  ETLLLLEGVLKHGDDWDLITQHVRTKNKLECIARLIQLPFGEHMLGAINGKSDSRFQTSQ 307

Query: 195  AANIRTIHH---GTIENSQEIMSTEDKPDIQNDEEKVVEESCAAPPLKKRRKQSIIDATD 25
              + +T H+    T   S E++        Q+  +K+VEE     P K++R  S ID T 
Sbjct: 308  TTDGKTNHYIVKDTSSQSNEMVDGMQIDGEQDGADKLVEEQ----PSKRQRLSSSIDVTG 363

Query: 24   SLMQTVA 4
            SLM+ +A
Sbjct: 364  SLMEQLA 370


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