BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022581
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588263.1| NADH-ubiquinone oxidoreductase chain [Medica...   238   e-100
ref|YP_588353.1| ribosomal protein S12 [Zea mays subsp. mays] gi...   254   2e-65
sp|Q96033.1|RT12_HELAN RecName: Full=Ribosomal protein S12, mito...   252   7e-65
ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Mille...   251   1e-64
ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgar...   251   1e-64

>ref|XP_003588263.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477311|gb|AES58514.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 362

 Score =  238 bits (606), Expect(2) = e-100
 Identities = 117/132 (88%), Positives = 120/132 (90%)
 Frame = -2

Query: 488 GGRT*ERGMPTFNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKI 309
           GGRT ER MPT NQLIRHGREEKRRTDRTRA DQCPQKQGV  RV  RTPKKPNSA RKI
Sbjct: 230 GGRTKERAMPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRPRVFKRTPKKPNSAQRKI 289

Query: 308 AKVRLSNRHDIFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRRR 129
           AKVRLSNRHDIFA+IPGEGHN QEHS VL+RGGRVKDLPGVK HCIRGVKDLLGIPDRRR
Sbjct: 290 AKVRLSNRHDIFAHIPGEGHNSQEHSTVLIRGGRVKDLPGVKSHCIRGVKDLLGIPDRRR 349

Query: 128 GRSKYGAERPKS 93
           GRSKYGAE+PKS
Sbjct: 350 GRSKYGAEKPKS 361



 Score =  154 bits (390), Expect(2) = e-100
 Identities = 81/115 (70%), Positives = 83/115 (72%)
 Frame = -3

Query: 871 LVMLEFSPXXXXXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDARSRFDI 692
           +VM EF+P                       SNSSTYPEKLSAYECGFDPFGDARSRFDI
Sbjct: 115 VVMSEFAPICIYLVISLLVSLILLGLPFPFASNSSTYPEKLSAYECGFDPFGDARSRFDI 174

Query: 691 RFYLVSILFIIFDLEVTFFFPWAVSSNKIDLFGFWSMMAFLLILTIGFLYEWKRG 527
           RFYLVSILFII D EVTF FPWAV  NKID FG WSMMAFLLILTIG LYEWKRG
Sbjct: 175 RFYLVSILFIIPDPEVTFSFPWAVPPNKIDPFGSWSMMAFLLILTIGSLYEWKRG 229


>ref|YP_588353.1| ribosomal protein S12 [Zea mays subsp. mays]
           gi|38605685|sp|P60098.1|RT12_WHEAT RecName:
           Full=Ribosomal protein S12, mitochondrial
           gi|38605686|sp|P60099.1|RT12_MAIZE RecName:
           Full=Ribosomal protein S12, mitochondrial
           gi|40795073|gb|AAR91117.1| ribosomal protein S12
           (mitochondrion) [Zea mays]
          Length = 125

 Score =  254 bits (648), Expect = 2e-65
 Identities = 123/125 (98%), Positives = 124/125 (99%)
 Frame = -2

Query: 464 MPTFNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 285
           MPT NQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR
Sbjct: 1   MPTKNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60

Query: 284 HDIFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE 105
           HDIFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRR+GRSKYGAE
Sbjct: 61  HDIFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRRKGRSKYGAE 120

Query: 104 RPKSK 90
           RPKSK
Sbjct: 121 RPKSK 125


>sp|Q96033.1|RT12_HELAN RecName: Full=Ribosomal protein S12, mitochondrial
           gi|1518351|emb|CAA89857.1| ribosomal protein S12
           [Helianthus annuus]
          Length = 125

 Score =  252 bits (644), Expect = 7e-65
 Identities = 120/125 (96%), Positives = 124/125 (99%)
 Frame = -2

Query: 464 MPTFNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 285
           MPT NQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR
Sbjct: 1   MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60

Query: 284 HDIFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE 105
           HDIFAYIPGEGHNLQEHSIVL+RGGRVKDLPGVKFHCIRGVKDLLGIPDRR+GRSKYGAE
Sbjct: 61  HDIFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRKGRSKYGAE 120

Query: 104 RPKSK 90
           +PKS+
Sbjct: 121 KPKSR 125


>ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Millettia pinnata]
           gi|372450318|ref|YP_005090500.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
           gi|316996005|dbj|BAD83444.2| ribosomal protein S12
           (mitochondrion) [Nicotiana tabacum]
           gi|357197325|gb|AET62922.1| ribosomal protein S12
           (mitochondrion) [Millettia pinnata]
           gi|357197364|gb|AET62960.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
          Length = 125

 Score =  251 bits (642), Expect = 1e-64
 Identities = 120/124 (96%), Positives = 123/124 (99%)
 Frame = -2

Query: 464 MPTFNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 285
           MPT NQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR
Sbjct: 1   MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60

Query: 284 HDIFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE 105
           HDIFAYIPGEGHNLQEHS+VL+RGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE
Sbjct: 61  HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE 120

Query: 104 RPKS 93
           +PKS
Sbjct: 121 KPKS 124


>ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435095|ref|YP_004222313.1| ribosomal protein S12
           [Beta vulgaris subsp. maritima]
           gi|346683187|ref|YP_004842119.1| ribosomal protein S12
           [Beta macrocarpa] gi|87248036|gb|ABD36073.1| ribosomal
           protein S12 [Beta vulgaris subsp. vulgaris]
           gi|148491434|dbj|BAA99468.2| ribosomal protein S12 [Beta
           vulgaris subsp. vulgaris] gi|317905649|emb|CBJ14048.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|319439828|emb|CBJ17539.1| ribosomal protein S12 [Beta
           vulgaris subsp. maritima] gi|320148728|emb|CBJ23366.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|345500105|emb|CBX24923.1| ribosomal protein S12 [Beta
           macrocarpa] gi|384939150|emb|CBL51997.1| ribosomal
           protein S12 (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 125

 Score =  251 bits (642), Expect = 1e-64
 Identities = 120/124 (96%), Positives = 123/124 (99%)
 Frame = -2

Query: 464 MPTFNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 285
           MPT NQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR
Sbjct: 1   MPTINQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60

Query: 284 HDIFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE 105
           HDIFAYIPGEGHNLQEHS+VL+RGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE
Sbjct: 61  HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAE 120

Query: 104 RPKS 93
           +PKS
Sbjct: 121 KPKS 124