BLASTX nr result

ID: Dioscorea21_contig00022572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022572
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525972.1| nucleic acid binding protein, putative [Rici...   120   4e-25
emb|CBI16864.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247...   116   4e-24
ref|XP_002305958.1| predicted protein [Populus trichocarpa] gi|2...   115   9e-24
ref|XP_002329267.1| predicted protein [Populus trichocarpa] gi|2...   109   7e-22

>ref|XP_002525972.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534704|gb|EEF36396.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 693

 Score =  120 bits (300), Expect = 4e-25
 Identities = 67/145 (46%), Positives = 94/145 (64%), Gaps = 6/145 (4%)
 Frame = +3

Query: 315 SPIVNVEVESQQKDSALSQSSELTTSVTMLEKEDPQQDQENGHAIIQNV------IAGAK 476
           SP++ V +E  +   A++ S  L++    L  ++   D +N  ++IQN       ++G K
Sbjct: 194 SPVMQVNIEVAE---AVAVSGNLSSFGFRLNAQNSCLDTQN-ESLIQNHMMKGGHVSGVK 249

Query: 477 RARITYDDQQPSVHVVYKSLTRESKKKLMQLMQHWSEWEAQRQSSSDVSPEEAFESGEET 656
           RARI Y++QQPSVHV Y SLTR SK+KL +L+Q WSEW  QR SSS     E  ESGEET
Sbjct: 250 RARIAYNEQQPSVHVTYNSLTRASKRKLEELLQQWSEWHVQRGSSSQ-DLNEVLESGEET 308

Query: 657 YFPALSLRSGRSSTVSFWLDNKRRK 731
           YFPAL + + +SS VSFW++N+ +K
Sbjct: 309 YFPALCVGTEKSSAVSFWIENQTKK 333


>emb|CBI16864.3| unnamed protein product [Vitis vinifera]
          Length = 1165

 Score =  117 bits (293), Expect = 2e-24
 Identities = 82/231 (35%), Positives = 121/231 (52%), Gaps = 24/231 (10%)
 Frame = +3

Query: 111  QLMMDSNNFTD-----PDASGTSNGRGEENVPELLNTVPDENNLTESTSQTIIPIG---- 263
            +L++DS+  T+     P  SG+  G  E+N  EL N+ P+      S+S + +       
Sbjct: 584  KLLLDSDMGTEELINPPAPSGSVCG-SEDN--ELHNSNPEPGEADSSSSNSEVKEDKLNI 640

Query: 264  DSXXXXXXXXXXXXGQYSPIVNVEVESQQKDSALSQSSELTTSVT---MLEKEDPQQDQE 434
            +S             + +P V ++ +   K      S E+T ++    ++         E
Sbjct: 641  ESLMQNKVDFEKVDSRLTPGVVLDKDLVDKQLTSQGSVEVTETIVVTKLINSSSSGVPTE 700

Query: 435  NG------------HAIIQNVIAGAKRARITYDDQQPSVHVVYKSLTRESKKKLMQLMQH 578
            NG            H I    I+G KRAR+T D+QQPSVHV+Y SLTR+SK+KL +L+Q 
Sbjct: 701  NGCLTAPDEGPIGNHMIDGTSISGVKRARLTIDEQQPSVHVIYNSLTRDSKRKLEELLQQ 760

Query: 579  WSEWEAQRQSSSDVSPEEAFESGEETYFPALSLRSGRSSTVSFWLDNKRRK 731
            WSEW A+  SSS   P+   +SGE+TYFPAL +   +SS VSFW+DN+ RK
Sbjct: 761  WSEWHAKYVSSSH-DPKGQLDSGEKTYFPALHVGLNKSSAVSFWVDNQTRK 810


>ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247996 [Vitis vinifera]
          Length = 575

 Score =  116 bits (291), Expect = 4e-24
 Identities = 57/105 (54%), Positives = 74/105 (70%)
 Frame = +3

Query: 417 PQQDQENGHAIIQNVIAGAKRARITYDDQQPSVHVVYKSLTRESKKKLMQLMQHWSEWEA 596
           P +     H I    I+G KRAR+T D+QQPSVHV+Y SLTR+SK+KL +L+Q WSEW A
Sbjct: 117 PDEGPIGNHMIDGTSISGVKRARLTIDEQQPSVHVIYNSLTRDSKRKLEELLQQWSEWHA 176

Query: 597 QRQSSSDVSPEEAFESGEETYFPALSLRSGRSSTVSFWLDNKRRK 731
           +  SSS   P+   +SGE+TYFPAL +   +SS VSFW+DN+ RK
Sbjct: 177 KYVSSSH-DPKGQLDSGEKTYFPALHVGLNKSSAVSFWVDNQTRK 220


>ref|XP_002305958.1| predicted protein [Populus trichocarpa] gi|222848922|gb|EEE86469.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  115 bits (288), Expect = 9e-24
 Identities = 54/98 (55%), Positives = 76/98 (77%)
 Frame = +3

Query: 438 GHAIIQNVIAGAKRARITYDDQQPSVHVVYKSLTRESKKKLMQLMQHWSEWEAQRQSSSD 617
           G++ ++  ++G KR RITY+++QPSVHV+Y SLTR SKKKL +L+Q WSEW AQ+ SSS 
Sbjct: 111 GYSALKANVSGVKRKRITYNEEQPSVHVMYNSLTRASKKKLEELLQQWSEWHAQQNSSSH 170

Query: 618 VSPEEAFESGEETYFPALSLRSGRSSTVSFWLDNKRRK 731
            S +E  +SGE+TYFPAL +   +SS V+FW++N+ RK
Sbjct: 171 DS-DEMLQSGEDTYFPALRIGMVKSSAVTFWIENQTRK 207


>ref|XP_002329267.1| predicted protein [Populus trichocarpa] gi|222870721|gb|EEF07852.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  109 bits (272), Expect = 7e-22
 Identities = 51/89 (57%), Positives = 66/89 (74%)
 Frame = +3

Query: 465 AGAKRARITYDDQQPSVHVVYKSLTRESKKKLMQLMQHWSEWEAQRQSSSDVSPEEAFES 644
           +G KR R+ YD+QQPSVHV+Y SLTR  K+KL +L+Q WSEW AQ+ SS D    E  +S
Sbjct: 1   SGVKRKRMAYDEQQPSVHVMYNSLTRSGKQKLEELLQQWSEWHAQQNSSHD--SNEMLQS 58

Query: 645 GEETYFPALSLRSGRSSTVSFWLDNKRRK 731
           GE+TYFPAL +   +SS VSFW++N+ RK
Sbjct: 59  GEDTYFPALRVGMEKSSAVSFWIENQARK 87


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