BLASTX nr result

ID: Dioscorea21_contig00022540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022540
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|XP_002521428.1| beta-galactosidase, putative [Ricinus commun...   188   1e-45
ref|XP_003635211.1| PREDICTED: beta-galactosidase 6-like [Vitis ...   186   4e-45
ref|XP_003540181.1| PREDICTED: beta-galactosidase 8-like isoform...   148   1e-33
ref|XP_003540180.1| PREDICTED: beta-galactosidase 8-like isoform...   148   1e-33

>ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|222860304|gb|EEE97851.1|
            predicted protein [Populus trichocarpa]
          Length = 849

 Score =  194 bits (492), Expect = 2e-47
 Identities = 84/142 (59%), Positives = 116/142 (81%)
 Frame = -3

Query: 730  WVNPGQNLLVLHEEVGGDPSKITVVTKTGQEICAQVSELDPPPVGSWKPSADTTSKHVTP 551
            WV+PG+NLLVLHEE+GGDPS+I+++T+TGQ+IC+ VSE DPPP  SWKP+ +  S+  +P
Sbjct: 711  WVHPGENLLVLHEELGGDPSQISLLTRTGQDICSIVSEDDPPPADSWKPNLEFMSQ--SP 768

Query: 550  SIRLSCERGWRIVSVSFASFGTPKGQCGKFSHGTCNAEGVLLIVKKACLGHESCSVAVSS 371
             +RL+CE GW I +++FASFGTP+G+CG F+ G C+A+ +L IV+KAC+GHE CS+ +S+
Sbjct: 769  EVRLTCEHGWHIAAINFASFGTPEGKCGTFTPGNCHAD-MLTIVQKACIGHERCSIPISA 827

Query: 370  LKFGDPCPGITKSLAVEAVCSE 305
             K GDPCPG+ K   VEA+CSE
Sbjct: 828  AKLGDPCPGVVKRFVVEALCSE 849


>ref|XP_002521428.1| beta-galactosidase, putative [Ricinus communis]
            gi|223539327|gb|EEF40918.1| beta-galactosidase, putative
            [Ricinus communis]
          Length = 841

 Score =  188 bits (477), Expect = 1e-45
 Identities = 86/142 (60%), Positives = 114/142 (80%)
 Frame = -3

Query: 730  WVNPGQNLLVLHEEVGGDPSKITVVTKTGQEICAQVSELDPPPVGSWKPSADTTSKHVTP 551
            WV+PG+NLLVLHEE+GGDPSKI+V+T+TG EIC+ VSE DPPP  SWK S++  S++  P
Sbjct: 703  WVHPGENLLVLHEELGGDPSKISVLTRTGHEICSIVSEDDPPPADSWKSSSEFKSQN--P 760

Query: 550  SIRLSCERGWRIVSVSFASFGTPKGQCGKFSHGTCNAEGVLLIVKKACLGHESCSVAVSS 371
             +RL+CE+GW I S++FASFGTP G CG F+ G+C+A+ +L IV+KAC+G E CS+++S+
Sbjct: 761  EVRLTCEQGWHIKSINFASFGTPAGICGTFNPGSCHAD-MLDIVQKACIGQEGCSISISA 819

Query: 370  LKFGDPCPGITKSLAVEAVCSE 305
               GDPCPG+ K  AVEA CSE
Sbjct: 820  ANLGDPCPGVLKRFAVEARCSE 841


>ref|XP_003635211.1| PREDICTED: beta-galactosidase 6-like [Vitis vinifera]
           gi|296080974|emb|CBI18606.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  186 bits (472), Expect = 4e-45
 Identities = 81/141 (57%), Positives = 113/141 (80%)
 Frame = -3

Query: 730 WVNPGQNLLVLHEEVGGDPSKITVVTKTGQEICAQVSELDPPPVGSWKPSADTTSKHVTP 551
           WV+ G+NLLVLHEE+GGDPSKI+++T+TGQE+CA VSE DPPP  SW+P+ +  S+  + 
Sbjct: 60  WVHSGKNLLVLHEELGGDPSKISLLTRTGQEVCAHVSEADPPPADSWQPNLEFMSQ--SS 117

Query: 550 SIRLSCERGWRIVSVSFASFGTPKGQCGKFSHGTCNAEGVLLIVKKACLGHESCSVAVSS 371
            +RL+CE+GW I  ++FASFGTP+G CG F+ G C+A  VL +V++AC+G E C++ VS+
Sbjct: 118 QVRLTCEQGWHISMINFASFGTPRGHCGTFNPGNCHA-NVLSVVQQACIGQEGCAIPVST 176

Query: 370 LKFGDPCPGITKSLAVEAVCS 308
            + GDPCPG+ KSLA+EA+CS
Sbjct: 177 ARLGDPCPGVLKSLAIEALCS 197


>ref|XP_003540181.1| PREDICTED: beta-galactosidase 8-like isoform 2 [Glycine max]
          Length = 848

 Score =  148 bits (374), Expect = 1e-33
 Identities = 72/142 (50%), Positives = 95/142 (66%), Gaps = 1/142 (0%)
 Frame = -3

Query: 730  WVNPGQNLLVLHEEVGGDPSKITVVTKTGQEICAQVSELDPPPVGSWKPSADTTSKHVTP 551
            W+ P  N+LVL EE GGDP++I+ VTK  + +CA VS+  PPPV  W    ++  K V P
Sbjct: 708  WLKPSGNILVLFEERGGDPTQISFVTKQTESLCAHVSDSHPPPVDLWNSETESGRK-VGP 766

Query: 550  SIRLSCERGWRIVS-VSFASFGTPKGQCGKFSHGTCNAEGVLLIVKKACLGHESCSVAVS 374
             + L+C    +++S + FAS+GTP G CG F HG C++   L IV+KAC+G  SCSV VS
Sbjct: 767  VLSLTCPHDNQVISSIKFASYGTPLGTCGNFYHGRCSSNKALSIVQKACIGSSSCSVGVS 826

Query: 373  SLKFGDPCPGITKSLAVEAVCS 308
            S  FGDPC G+ KSLAVEA C+
Sbjct: 827  SDTFGDPCRGMAKSLAVEATCA 848


>ref|XP_003540180.1| PREDICTED: beta-galactosidase 8-like isoform 1 [Glycine max]
          Length = 840

 Score =  148 bits (374), Expect = 1e-33
 Identities = 72/142 (50%), Positives = 95/142 (66%), Gaps = 1/142 (0%)
 Frame = -3

Query: 730  WVNPGQNLLVLHEEVGGDPSKITVVTKTGQEICAQVSELDPPPVGSWKPSADTTSKHVTP 551
            W+ P  N+LVL EE GGDP++I+ VTK  + +CA VS+  PPPV  W    ++  K V P
Sbjct: 700  WLKPSGNILVLFEERGGDPTQISFVTKQTESLCAHVSDSHPPPVDLWNSETESGRK-VGP 758

Query: 550  SIRLSCERGWRIVS-VSFASFGTPKGQCGKFSHGTCNAEGVLLIVKKACLGHESCSVAVS 374
             + L+C    +++S + FAS+GTP G CG F HG C++   L IV+KAC+G  SCSV VS
Sbjct: 759  VLSLTCPHDNQVISSIKFASYGTPLGTCGNFYHGRCSSNKALSIVQKACIGSSSCSVGVS 818

Query: 373  SLKFGDPCPGITKSLAVEAVCS 308
            S  FGDPC G+ KSLAVEA C+
Sbjct: 819  SDTFGDPCRGMAKSLAVEATCA 840


Top