BLASTX nr result

ID: Dioscorea21_contig00022518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022518
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ88705.1| predicted protein [Hordeum vulgare subsp. vulgare]    150   8e-35
tpg|DAA43421.1| TPA: LOW QUALITY PROTEIN: putative AMP-dependent...   149   2e-34
tpg|DAA43419.1| TPA: putative AMP-dependent synthetase and ligas...   149   2e-34
gb|ACF80143.2| unknown [Zea mays] gi|414864865|tpg|DAA43422.1| T...   149   2e-34
gb|ACG28731.1| 4-coumarate--CoA ligase 2 [Zea mays]                   149   2e-34

>dbj|BAJ88705.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 574

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/128 (55%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   NSVVIMRKYEMERMLRSIERFKVTHLYLVPPVMIALAKRGRITEYDVSSLRCLAAGAAPV 182
           N+VV+M  + M+ ++R++++ +VTH++ VPPVMIALAK GR+ +YD+SSL+ + +GAAP+
Sbjct: 289 NAVVVMSGFAMDSVMRAVQQHRVTHVFCVPPVMIALAKHGRVGKYDLSSLKFIGSGAAPL 348

Query: 183 GKDVMAEVAKVLPNAEIIQGYGLTEACGIVSLGY-SFGKAQQFGSAGYLIPGVEGKVVSV 359
           G+DVM  VAK  P+AEI+QGYG+TE CGI+SL Y   G+A+QFGS G L+ GVE KV+ V
Sbjct: 349 GRDVMEVVAKNFPDAEIVQGYGMTETCGIISLEYPEKGQARQFGSTGTLVVGVEAKVIDV 408

Query: 360 DTLQLLPP 383
           +T + LPP
Sbjct: 409 ETQKHLPP 416


>tpg|DAA43421.1| TPA: LOW QUALITY PROTEIN: putative AMP-dependent synthetase and
           ligase superfamily protein [Zea mays]
          Length = 420

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/128 (57%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   NSVVIMRKYEMERMLRSIERFKVTHLYLVPPVMIALAKRGRITEYDVSSLRCLAAGAAPV 182
           NSVV+M +++M+ ++ +++R +VTHL+ VPPVMIALAK G + +YD+SSLR + +GAAP+
Sbjct: 270 NSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMIALAKLGSVGKYDLSSLRFIGSGAAPL 329

Query: 183 GKDVMAEVAKVLPNAEIIQGYGLTEACGIVSLGY-SFGKAQQFGSAGYLIPGVEGKVVSV 359
           GKDVM  VAK  P A I QGYG+TE CGI+SL Y   G+ +QFGS G L+ GVE K+V V
Sbjct: 330 GKDVMEGVAKNFPEAVIAQGYGMTETCGIISLEYPEKGQIRQFGSTGALVSGVEAKIVDV 389

Query: 360 DTLQLLPP 383
           +TL  LPP
Sbjct: 390 ETLICLPP 397


>tpg|DAA43419.1| TPA: putative AMP-dependent synthetase and ligase superfamily
           protein isoform 1 [Zea mays]
           gi|414864863|tpg|DAA43420.1| TPA: putative AMP-dependent
           synthetase and ligase superfamily protein isoform 2 [Zea
           mays]
          Length = 555

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/128 (57%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   NSVVIMRKYEMERMLRSIERFKVTHLYLVPPVMIALAKRGRITEYDVSSLRCLAAGAAPV 182
           NSVV+M +++M+ ++ +++R +VTHL+ VPPVMIALAK G + +YD+SSLR + +GAAP+
Sbjct: 270 NSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMIALAKLGSVGKYDLSSLRFIGSGAAPL 329

Query: 183 GKDVMAEVAKVLPNAEIIQGYGLTEACGIVSLGY-SFGKAQQFGSAGYLIPGVEGKVVSV 359
           GKDVM  VAK  P A I QGYG+TE CGI+SL Y   G+ +QFGS G L+ GVE K+V V
Sbjct: 330 GKDVMEGVAKNFPEAVIAQGYGMTETCGIISLEYPEKGQIRQFGSTGALVSGVEAKIVDV 389

Query: 360 DTLQLLPP 383
           +TL  LPP
Sbjct: 390 ETLICLPP 397


>gb|ACF80143.2| unknown [Zea mays] gi|414864865|tpg|DAA43422.1| TPA: putative
           AMP-dependent synthetase and ligase superfamily protein
           [Zea mays] gi|414864866|tpg|DAA43423.1| TPA: putative
           AMP-dependent synthetase and ligase superfamily protein
           [Zea mays]
          Length = 408

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/128 (57%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   NSVVIMRKYEMERMLRSIERFKVTHLYLVPPVMIALAKRGRITEYDVSSLRCLAAGAAPV 182
           NSVV+M +++M+ ++ +++R +VTHL+ VPPVMIALAK G + +YD+SSLR + +GAAP+
Sbjct: 123 NSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMIALAKLGSVGKYDLSSLRFIGSGAAPL 182

Query: 183 GKDVMAEVAKVLPNAEIIQGYGLTEACGIVSLGY-SFGKAQQFGSAGYLIPGVEGKVVSV 359
           GKDVM  VAK  P A I QGYG+TE CGI+SL Y   G+ +QFGS G L+ GVE K+V V
Sbjct: 183 GKDVMEGVAKNFPEAVIAQGYGMTETCGIISLEYPEKGQIRQFGSTGALVSGVEAKIVDV 242

Query: 360 DTLQLLPP 383
           +TL  LPP
Sbjct: 243 ETLICLPP 250


>gb|ACG28731.1| 4-coumarate--CoA ligase 2 [Zea mays]
          Length = 520

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/128 (57%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   NSVVIMRKYEMERMLRSIERFKVTHLYLVPPVMIALAKRGRITEYDVSSLRCLAAGAAPV 182
           NSVV+M +++M+ ++ +++R +VTHL+ VPPVMIALAK G + +YD+SSLR + +GAAP+
Sbjct: 235 NSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMIALAKLGSVGKYDLSSLRFIGSGAAPL 294

Query: 183 GKDVMAEVAKVLPNAEIIQGYGLTEACGIVSLGY-SFGKAQQFGSAGYLIPGVEGKVVSV 359
           GKDVM  VAK  P A I QGYG+TE CGI+SL Y   G+ +QFGS G L+ GVE K+V V
Sbjct: 295 GKDVMEGVAKNFPEAVIAQGYGMTETCGIISLEYPEKGQIRQFGSTGALVSGVEAKIVDV 354

Query: 360 DTLQLLPP 383
           +TL  LPP
Sbjct: 355 ETLICLPP 362


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