BLASTX nr result
ID: Dioscorea21_contig00022508
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00022508
(732 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800... 269 4e-70
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 265 9e-69
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 264 2e-68
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 264 2e-68
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 263 3e-68
>ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max]
Length = 1746
Score = 269 bits (688), Expect = 4e-70
Identities = 131/240 (54%), Positives = 169/240 (70%), Gaps = 3/240 (1%)
Frame = -1
Query: 732 IPLTITSDRDSKFMSHFWRTLWRKLGTQLQFSTTAHPQTDGQTEVTNRSLGNLLRCFVGK 553
+P +I SDRD+KF+SHFWRTLW K+GT+L FSTT HPQTDGQTEV NR+LG LLR + K
Sbjct: 1252 LPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKK 1311
Query: 552 NVRQWDLLLPQIEFAYNHSFHQSIKCSPFEAVYGYNLSGPLDLTPLPTPHSFS-SEASER 376
N++ W+ LP +EFAYN + H + CSPFE VYG+N PLDL P+P F +A +
Sbjct: 1312 NLKSWEACLPHVEFAYNRAVHSTTNCSPFEIVYGFNPLTPLDLLPMPNIAMFKHKDAQAK 1371
Query: 375 AVQIKKLHTQIREHIVRQNEKYCKQANKHRKYVEFKSGDFVWVHLRRERFPPGKYNKLRA 196
A +KKLH Q++ I ++N Y +QANK RK V + GD+VWVHLR+ERFP + +KL+
Sbjct: 1372 AEYVKKLHEQVKVQIEKKNASYARQANKSRKKVVLEPGDWVWVHLRKERFPKHRKSKLQP 1431
Query: 195 RAAGPFQVVKRIGENAYEIDLPSEYEVSKTFNVSDLSPYHGT--HENLDSRASLLQPREF 22
R GPFQV+++I +NAY+IDLPSEY VS TFNVSDLS + H LD + L+ F
Sbjct: 1432 RGDGPFQVLEKINDNAYKIDLPSEYNVSATFNVSDLSLFDVELYHTELDDFKAELESCNF 1491
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 265 bits (676), Expect = 9e-69
Identities = 126/238 (52%), Positives = 166/238 (69%)
Frame = -1
Query: 732 IPLTITSDRDSKFMSHFWRTLWRKLGTQLQFSTTAHPQTDGQTEVTNRSLGNLLRCFVGK 553
+P TI SDRD+KF+SHFWRTLW KLGT+L FSTT HPQTDGQTEV NR+L +LR + K
Sbjct: 1324 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKK 1383
Query: 552 NVRQWDLLLPQIEFAYNHSFHQSIKCSPFEAVYGYNLSGPLDLTPLPTPHSFSSEASERA 373
N++ W+ LP IEFAYN S H + K PF+ VYG P+DL PLP+ + +A +RA
Sbjct: 1384 NIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRA 1443
Query: 372 VQIKKLHTQIREHIVRQNEKYCKQANKHRKYVEFKSGDFVWVHLRRERFPPGKYNKLRAR 193
+ KLH +E+I R N KY +K R+ + F+ GD VW+HLR+ERFP + +KL R
Sbjct: 1444 ELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPR 1503
Query: 192 AAGPFQVVKRIGENAYEIDLPSEYEVSKTFNVSDLSPYHGTHENLDSRASLLQPREFD 19
A GPF+V+ +I ENAY+IDLP+++ VS TFNV+DL PY G + L+SR + +Q E D
Sbjct: 1504 ADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDD 1561
Score = 132 bits (333), Expect = 6e-29
Identities = 81/221 (36%), Positives = 121/221 (54%), Gaps = 6/221 (2%)
Frame = -1
Query: 732 IPLTITSDRDSKFMSHFWRTLWRKLGTQLQFSTTAHPQTDGQTEVTNRSLGNLLRCFVGK 553
+P I SDR+S+F SHFW+ L +LGT+L FST HPQTDGQTE N+ L ++L V
Sbjct: 2146 VPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLD 2205
Query: 552 NVRQWDLLLPQIEFAYNHSFHQSIKCSPFEAVYGYNLSGPLDLTPLPTPHSFSSE-ASER 376
+ WD LP EF+YN+S+ SI+ +P+EA+YG PL + F ++ E
Sbjct: 2206 FGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQVGESQVFGTDILREA 2265
Query: 375 AVQIKKLHTQIREHIVRQNEKYCKQANKHRKYVEFKSGDFVWVHLRR----ERFPPGKYN 208
+++ + ++ RQ A+ R+ +EF DFV++ + RF
Sbjct: 2266 EAKVRTIWDNLKVAQSRQK----SYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQ--TKG 2319
Query: 207 KLRARAAGPFQVVKRIGENAYEIDLPSEY-EVSKTFNVSDL 88
KL R GPF+++ R GE AY+++LP+ V F+VS L
Sbjct: 2320 KLAPRFVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQL 2360
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 264 bits (674), Expect = 2e-68
Identities = 122/238 (51%), Positives = 168/238 (70%)
Frame = -1
Query: 732 IPLTITSDRDSKFMSHFWRTLWRKLGTQLQFSTTAHPQTDGQTEVTNRSLGNLLRCFVGK 553
+P TI SDRD+KF+S+FW+TLW KLGT+L FSTT HPQTDGQTEV NR+L LLR + K
Sbjct: 1327 MPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKK 1386
Query: 552 NVRQWDLLLPQIEFAYNHSFHQSIKCSPFEAVYGYNLSGPLDLTPLPTPHSFSSEASERA 373
N+++W+ LP +EFAYN + H + PFE VYG+ P+DL PLP EAS+RA
Sbjct: 1387 NLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRA 1446
Query: 372 VQIKKLHTQIREHIVRQNEKYCKQANKHRKYVEFKSGDFVWVHLRRERFPPGKYNKLRAR 193
+KK+H + +E I ++++ Y ANK+RK V F+ GD VWVHLR++RFP + +KL R
Sbjct: 1447 TYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPR 1506
Query: 192 AAGPFQVVKRIGENAYEIDLPSEYEVSKTFNVSDLSPYHGTHENLDSRASLLQPREFD 19
GPF+V+ +I +NAY+I+LP +Y VS TFNV+DL+P+ G ++ SR++ Q E D
Sbjct: 1507 GDGPFRVLSKINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDD 1564
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 264 bits (674), Expect = 2e-68
Identities = 122/238 (51%), Positives = 168/238 (70%)
Frame = -1
Query: 732 IPLTITSDRDSKFMSHFWRTLWRKLGTQLQFSTTAHPQTDGQTEVTNRSLGNLLRCFVGK 553
+P TI SDRD+KF+S+FW+TLW KLGT+L FSTT HPQTDGQTEV NR+L LLR + K
Sbjct: 295 MPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKK 354
Query: 552 NVRQWDLLLPQIEFAYNHSFHQSIKCSPFEAVYGYNLSGPLDLTPLPTPHSFSSEASERA 373
N+++W+ LP +EFAYN + H + PFE VYG+ P+DL PLP EAS+RA
Sbjct: 355 NLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRA 414
Query: 372 VQIKKLHTQIREHIVRQNEKYCKQANKHRKYVEFKSGDFVWVHLRRERFPPGKYNKLRAR 193
+KK+H + +E I ++++ Y ANK+RK V F+ GD VWVHLR++RFP + +KL R
Sbjct: 415 TYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPR 474
Query: 192 AAGPFQVVKRIGENAYEIDLPSEYEVSKTFNVSDLSPYHGTHENLDSRASLLQPREFD 19
GPF+V+ +I +NAY+I+LP +Y VS TFNV+DL+P+ G ++ SR++ Q E D
Sbjct: 475 GDGPFRVLSKINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDD 532
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 263 bits (672), Expect = 3e-68
Identities = 129/239 (53%), Positives = 169/239 (70%)
Frame = -1
Query: 732 IPLTITSDRDSKFMSHFWRTLWRKLGTQLQFSTTAHPQTDGQTEVTNRSLGNLLRCFVGK 553
IP TI SDRD+KF+SHFWR LW KLGT+L FST+ HPQTDGQTEV NR+LGN+LR +
Sbjct: 785 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKG 844
Query: 552 NVRQWDLLLPQIEFAYNHSFHQSIKCSPFEAVYGYNLSGPLDLTPLPTPHSFSSEASERA 373
+ W+ LP +EFAYN +FH S +PFE VYG+N PLDL PLPT + + ++A
Sbjct: 845 KLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKA 904
Query: 372 VQIKKLHTQIREHIVRQNEKYCKQANKHRKYVEFKSGDFVWVHLRRERFPPGKYNKLRAR 193
+KK+H Q R I ++N++ + NK RKYV FK GD VWVH+R+ERFP + KL R
Sbjct: 905 DMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKLDPR 964
Query: 192 AAGPFQVVKRIGENAYEIDLPSEYEVSKTFNVSDLSPYHGTHENLDSRASLLQPREFDA 16
+GP++V++RIG+NAY++DLP E++VS TFNVSDLS Y +LDSR + LQ D+
Sbjct: 965 GSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDA---DLDSRTNSLQEEGNDS 1020