BLASTX nr result

ID: Dioscorea21_contig00022446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022446
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558639.1| PREDICTED: ubiquitin-like-conjugating enzyme...   123   2e-26
ref|XP_002448117.1| hypothetical protein SORBIDRAFT_06g021450 [S...   120   1e-25
gb|EEE53276.1| hypothetical protein OsJ_36223 [Oryza sativa Japo...   119   2e-25
ref|XP_002320561.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ABA98685.2| Autophagocytosis associated protein, C-terminal d...   118   6e-25

>ref|XP_003558639.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like
           [Brachypodium distachyon]
          Length = 214

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/93 (63%), Positives = 71/93 (76%)
 Frame = -1

Query: 387 QPLNLDEIENDLPPSSSKILRESKWTYMTLGEHPYLRRPWYTLHPCATSDWMKLLLGGTS 208
           Q L +DEI+ DLP  S  +L ESKWT++T  EHP+L RPW+TLHPC TSDWMKLLLG + 
Sbjct: 123 QLLTIDEIKKDLPAHSLNVLSESKWTFITREEHPHLSRPWFTLHPCGTSDWMKLLLGKSG 182

Query: 207 MKDLDISSYLLSWLSVVGQAVGLRIPLELQQRS 109
            KDL +  YL +WLSVVGQAVGL+IPL+L   S
Sbjct: 183 EKDLCL-QYLSTWLSVVGQAVGLKIPLKLHCNS 214


>ref|XP_002448117.1| hypothetical protein SORBIDRAFT_06g021450 [Sorghum bicolor]
           gi|241939300|gb|EES12445.1| hypothetical protein
           SORBIDRAFT_06g021450 [Sorghum bicolor]
          Length = 216

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/94 (62%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = -1

Query: 387 QPLNLDEIENDLPPSSSKILRESKWTYMTLGEHPYLRRPWYTLHPCATSDWMKLLLGGTS 208
           Q L LDE++  LP  S K+L ESKWT++T  EHP+L +PW TLHPCATSDWMKLLL  T 
Sbjct: 123 QLLTLDEVKEGLPSHSQKVLSESKWTFITQEEHPHLSKPWLTLHPCATSDWMKLLLEETK 182

Query: 207 MKDLDIS-SYLLSWLSVVGQAVGLRIPLELQQRS 109
             D + S  YL +WLSVVGQAVGL+IPLEL   S
Sbjct: 183 ATDKERSLQYLPAWLSVVGQAVGLKIPLELHSNS 216


>gb|EEE53276.1| hypothetical protein OsJ_36223 [Oryza sativa Japonica Group]
          Length = 223

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/97 (60%), Positives = 70/97 (72%)
 Frame = -1

Query: 387 QPLNLDEIENDLPPSSSKILRESKWTYMTLGEHPYLRRPWYTLHPCATSDWMKLLLGGTS 208
           Q L LDEI+ DLP  S K+L ESKWT++T  EHP+  RPW+TLHPC TSD MKLLL G  
Sbjct: 127 QLLTLDEIKEDLPSHSLKLLGESKWTFITREEHPHFSRPWFTLHPCGTSDCMKLLLEGVE 186

Query: 207 MKDLDISSYLLSWLSVVGQAVGLRIPLELQQRSISTR 97
            KD  +  YL +WLSVVGQAVGL+IPLEL    + T+
Sbjct: 187 NKDQHV-QYLPAWLSVVGQAVGLKIPLELYASGLKTQ 222


>ref|XP_002320561.1| predicted protein [Populus trichocarpa] gi|222861334|gb|EEE98876.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 3/96 (3%)
 Frame = -1

Query: 384 PLNLDEIENDLPPSSSKILRESKWTYMTLGEHPYLRRPWYTLHPCATSDWMKLLLGG--- 214
           PL L+EIE DLP  SSK+L E+KWT++T  EHP+L RPWY LHPC TS+WMKLL  G   
Sbjct: 139 PLLLNEIEKDLPACSSKVLLETKWTFITQEEHPFLNRPWYKLHPCGTSEWMKLLCLGDEV 198

Query: 213 TSMKDLDISSYLLSWLSVVGQAVGLRIPLELQQRSI 106
            +   L I  YL+SW SVVGQ VGL+ PLE+ ++S+
Sbjct: 199 AAKNGLAIELYLVSWFSVVGQVVGLKTPLEMVKKSV 234


>gb|ABA98685.2| Autophagocytosis associated protein, C-terminal domain containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 248

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/91 (63%), Positives = 68/91 (74%)
 Frame = -1

Query: 387 QPLNLDEIENDLPPSSSKILRESKWTYMTLGEHPYLRRPWYTLHPCATSDWMKLLLGGTS 208
           Q L LDEI+ DLP  S K+L ESKWT++T  EHP+  RPW+TLHPC TSD MKLLL G  
Sbjct: 126 QLLTLDEIKEDLPSHSLKLLGESKWTFITREEHPHFSRPWFTLHPCGTSDCMKLLLEGVE 185

Query: 207 MKDLDISSYLLSWLSVVGQAVGLRIPLELQQ 115
            KD  +  YL +WLSVVGQAVGL+IPLEL +
Sbjct: 186 NKDQHV-QYLPAWLSVVGQAVGLKIPLELYE 215


Top