BLASTX nr result

ID: Dioscorea21_contig00022442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022442
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265359.2| PREDICTED: cyclin-dependent kinase F-4-like ...   140   1e-31
ref|XP_003557171.1| PREDICTED: cyclin-dependent kinase F-4-like ...   139   3e-31
gb|AAO25540.1| GAMYB-binding protein [Hordeum vulgare subsp. vul...   133   2e-29
ref|XP_002436374.1| hypothetical protein SORBIDRAFT_10g001310 [S...   133   2e-29
ref|NP_001056617.1| Os06g0116100 [Oryza sativa Japonica Group] g...   132   3e-29

>ref|XP_002265359.2| PREDICTED: cyclin-dependent kinase F-4-like [Vitis vinifera]
           gi|296088459|emb|CBI37450.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/105 (64%), Positives = 85/105 (80%)
 Frame = +1

Query: 1   LHLADMMNYQFPQFACVHLSALIPSASEDALSLISSLCAWNPKKRPTAAEALQHPFFQTC 180
           L LA+ +NYQFPQF+ +HLS LIPSASEDA+SLI+SLC+W+P KRPTA EALQHPFFQ+C
Sbjct: 227 LKLANAINYQFPQFSSIHLSVLIPSASEDAISLITSLCSWDPCKRPTALEALQHPFFQSC 286

Query: 181 FNIPQSLRPKATGIPKTPPSVGPRGALEHKSSRRFSTGTLSNTNP 315
           F +P SLRP+ T + +TPPS   +GAL+ KS RR+S  T SN+ P
Sbjct: 287 FYVPPSLRPR-TAVTRTPPSGETKGALDQKSGRRYSRAT-SNSKP 329


>ref|XP_003557171.1| PREDICTED: cyclin-dependent kinase F-4-like [Brachypodium
           distachyon]
          Length = 475

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/105 (60%), Positives = 81/105 (77%)
 Frame = +1

Query: 1   LHLADMMNYQFPQFACVHLSALIPSASEDALSLISSLCAWNPKKRPTAAEALQHPFFQTC 180
           L LA  +N+QFPQ   +HLS ++PSASEDA++LIS LC+W+P++RPTA E LQHPFFQ C
Sbjct: 227 LQLAASINFQFPQLESIHLSEVVPSASEDAVNLISWLCSWDPRRRPTAVEVLQHPFFQPC 286

Query: 181 FNIPQSLRPKATGIPKTPPSVGPRGALEHKSSRRFSTGTLSNTNP 315
           F IP SLR ++TG   TPPS G RGAL+ K++RR+  GTLSN  P
Sbjct: 287 FYIPPSLRFRSTGYATTPPSAGARGALDLKNTRRYPAGTLSNEKP 331


>gb|AAO25540.1| GAMYB-binding protein [Hordeum vulgare subsp. vulgare]
          Length = 483

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = +1

Query: 1   LHLADMMNYQFPQFACVHLSALIPSASEDALSLISSLCAWNPKKRPTAAEALQHPFFQTC 180
           L LA  +++QFPQ   ++LS ++P+ASEDAL+LIS LC+W+P+KRPTA E LQHPFFQ C
Sbjct: 227 LQLAASIHFQFPQSGSINLSEVVPTASEDALNLISWLCSWDPRKRPTAVEVLQHPFFQPC 286

Query: 181 FNIPQSLRPKATGIPKTPPSVGPRGALEHKSSRRFSTGTLSNTNP 315
           F +P SLR ++TG    PPSVG +GA++ K++RR+  GTLSN  P
Sbjct: 287 FYVPPSLRYRSTGYATPPPSVGAKGAMDQKNARRYPVGTLSNGRP 331


>ref|XP_002436374.1| hypothetical protein SORBIDRAFT_10g001310 [Sorghum bicolor]
           gi|241914597|gb|EER87741.1| hypothetical protein
           SORBIDRAFT_10g001310 [Sorghum bicolor]
          Length = 473

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/105 (58%), Positives = 78/105 (74%)
 Frame = +1

Query: 1   LHLADMMNYQFPQFACVHLSALIPSASEDALSLISSLCAWNPKKRPTAAEALQHPFFQTC 180
           L LA  + +QFPQ   VHLS ++P ASEDA+SLIS LC+W+P++RPTA E LQHPFFQ C
Sbjct: 227 LQLAASIGFQFPQCESVHLSEVVPLASEDAISLISWLCSWDPRRRPTAVEVLQHPFFQQC 286

Query: 181 FNIPQSLRPKATGIPKTPPSVGPRGALEHKSSRRFSTGTLSNTNP 315
           F +P SLR K+TG   TPPS G +GA++ K+ RR+S GT+ N  P
Sbjct: 287 FYVPPSLRFKSTGYASTPPSAGAKGAVDQKNIRRYSMGTVPNARP 331


>ref|NP_001056617.1| Os06g0116100 [Oryza sativa Japonica Group]
           gi|55296195|dbj|BAD67913.1| putative GAMYB-binding
           protein [Oryza sativa Japonica Group]
           gi|113594657|dbj|BAF18531.1| Os06g0116100 [Oryza sativa
           Japonica Group] gi|194396107|gb|ACF60471.1| myb-binding
           protein [Oryza sativa Japonica Group]
           gi|215697479|dbj|BAG91473.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222634854|gb|EEE64986.1| hypothetical protein
           OsJ_19906 [Oryza sativa Japonica Group]
          Length = 484

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   LHLADMMNYQFPQFACVHLSALIPSASEDALSLISSLCAWNPKKRPTAAEALQHPFFQTC 180
           L LA  + +QFPQ   +HLS ++PSASEDA+SLIS LC+W+P++RPTA E LQHPFFQ C
Sbjct: 227 LQLAASIRFQFPQSGSIHLSEVVPSASEDAISLISWLCSWDPQRRPTAVEVLQHPFFQPC 286

Query: 181 FNIPQSLRPKAT-GIPKTPPSVGPRGALEHKSSRRFSTGTLSNTNP 315
           F IP SLR ++T G   TPPSVG +GA++ K++RR+S G LSN  P
Sbjct: 287 FYIPPSLRFRSTNGYAATPPSVGAKGAVDQKNARRYSVGPLSNGRP 332


Top