BLASTX nr result

ID: Dioscorea21_contig00022428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022428
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300362.1| multidrug resistance protein ABC transporter...   126   2e-27
ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3...   122   2e-26
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   120   9e-26
ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   117   1e-24
ref|XP_004164311.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   116   2e-24

>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1488

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/120 (50%), Positives = 86/120 (71%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 LDDIPKLASHDSACHVYSVFSNKLQLDC----RIGSFKLVKALFLSVWREVLLSILFALC 183
           L+D+P+L S DS    +SVF NKL+ D     R+ +FKL+KAL LS W+E+LL+ L A+ 
Sbjct: 249 LEDVPQLHSVDSVVGAFSVFKNKLESDSGAASRVTAFKLLKALLLSAWKEILLTALLAII 308

Query: 182 FTCASFVGPYLLDAFVRYLEARQEAIVKGQVLVFVFLFAKIVECLSQRHWFFQTQRFGMK 3
           +T AS+VGPYL+D+FV+ L+ R E   +G +L   F  AK+VECLSQRHWFF+ Q+ G++
Sbjct: 309 YTSASYVGPYLIDSFVQCLDGRGEYKNQGYILASTFFVAKVVECLSQRHWFFRLQQIGIR 368


>ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1490

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 6/122 (4%)
 Frame = -2

Query: 350 LDDIPKLASHDSACHVYSVFSNKLQLDC------RIGSFKLVKALFLSVWREVLLSILFA 189
           L+D+P+L + DS    +  F +KL+ DC       I + KLVK L  S W+E+L +   A
Sbjct: 253 LEDVPQLDTKDSVVGAFPSFRDKLEADCDANAINSITTLKLVKNLAKSAWKEILFTAFLA 312

Query: 188 LCFTCASFVGPYLLDAFVRYLEARQEAIVKGQVLVFVFLFAKIVECLSQRHWFFQTQRFG 9
           L  T AS+VGPYL+D FV+YL+ R++   +G VLVFVF FAKIVECLSQRHWFF+ Q+ G
Sbjct: 313 LLNTLASYVGPYLIDVFVQYLDGRRQYENQGYVLVFVFFFAKIVECLSQRHWFFRLQQIG 372

Query: 8   MK 3
           ++
Sbjct: 373 IR 374


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355519065|gb|AET00689.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1521

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/120 (47%), Positives = 84/120 (70%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 LDDIPKLASHDSACHVYSVFSNKLQLDC----RIGSFKLVKALFLSVWREVLLSILFALC 183
           L+D+P+L S DS    + +F  KL+ DC    R+ + KLVK+L +S W+E+L +   AL 
Sbjct: 265 LEDVPQLDSGDSVVGAFPIFREKLEADCGAVNRVTTLKLVKSLIISGWKEILFTAFLALL 324

Query: 182 FTCASFVGPYLLDAFVRYLEARQEAIVKGQVLVFVFLFAKIVECLSQRHWFFQTQRFGMK 3
            T AS+VGPYL+D+FV+YL+ ++    +G VLV  F FAK+VECL+QRHWFF+ Q+ G++
Sbjct: 325 NTFASYVGPYLIDSFVQYLDGKRLYENQGYVLVSAFFFAKLVECLTQRHWFFRLQQLGLR 384


>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223527170|gb|EEF29340.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/121 (48%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
 Frame = -2

Query: 350 LDDIPKLASHDSACHVYSVFSNKLQLDCR-----IGSFKLVKALFLSVWREVLLSILFAL 186
           L+D+P+L S DS    + VF NKL+L        + +FKLVKALF S W+E+L + L AL
Sbjct: 77  LEDVPQLHSGDSVVGAFPVFRNKLELGSGHAGGGVTTFKLVKALFFSAWKEILWTALLAL 136

Query: 185 CFTCASFVGPYLLDAFVRYLEARQEAIVKGQVLVFVFLFAKIVECLSQRHWFFQTQRFGM 6
            +T AS+VGPYL+DAFV+ L  +     +G +L   FL  K+VECLSQRHWFF+ Q+ G+
Sbjct: 137 LYTVASYVGPYLIDAFVQCLNGQGAFKNQGYLLASAFLVGKLVECLSQRHWFFRLQQIGI 196

Query: 5   K 3
           +
Sbjct: 197 R 197


>ref|XP_004164311.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           3-like [Cucumis sativus]
          Length = 1504

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/120 (43%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 LDDIPKLASHDSACHVYSVFSNKLQLDC----RIGSFKLVKALFLSVWREVLLSILFALC 183
           L+DIP+LAS D+    + +  NKL+ +C    R+ +  L K L  + W+E+LL+ +FA  
Sbjct: 267 LEDIPQLASRDAVSGTFQILRNKLESECGTINRVTTLSLAKCLLYTAWKEILLTAVFAFI 326

Query: 182 FTCASFVGPYLLDAFVRYLEARQEAIVKGQVLVFVFLFAKIVECLSQRHWFFQTQRFGMK 3
           +T A++VGPYL+D FV+YL   ++   +G VL  VF  AK+VECL+ RHWFF+ Q+ G++
Sbjct: 327 YTLATYVGPYLIDTFVQYLNGHRDFENEGYVLACVFFLAKLVECLAMRHWFFRVQQVGIR 386


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