BLASTX nr result

ID: Dioscorea21_contig00022423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022423
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW82232.1| putative ubiquitin-conjugating enzyme family [Zea...   121   5e-26
ref|NP_001140410.1| uncharacterized protein LOC100272466 [Zea ma...   121   5e-26
ref|NP_001055755.1| Os05g0460200 [Oryza sativa Japonica Group] g...   121   5e-26
ref|NP_001105605.1| ubiquitin-conjugating enzyme protein E2 [Zea...   121   7e-26
ref|XP_003568302.1| PREDICTED: ubiquitin-conjugating enzyme E2 7...   120   1e-25

>gb|AFW82232.1| putative ubiquitin-conjugating enzyme family [Zea mays]
          Length = 126

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/72 (80%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   SQASXXXXXXXXXXMKNPVDGFSAGLVDDTNVFEWIVTIIGPPDTLYDGGYFNAIMTFPA 182
           SQAS           KNPVDGFSAGLVDD+NVFEW VTIIGPPDTLYDGGYFNAIMTFP 
Sbjct: 6   SQASLLLQKQLKDLAKNPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQ 65

Query: 183 NYPNSPPSVRFT 218
           NYPNSPPSVRFT
Sbjct: 66  NYPNSPPSVRFT 77


>ref|NP_001140410.1| uncharacterized protein LOC100272466 [Zea mays]
           gi|194699382|gb|ACF83775.1| unknown [Zea mays]
           gi|337263377|gb|AEI69331.1| ubiquitin-conjugating enzyme
           E2 [Zea mays] gi|413949582|gb|AFW82231.1| putative
           ubiquitin-conjugating enzyme family [Zea mays]
          Length = 169

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/72 (80%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   SQASXXXXXXXXXXMKNPVDGFSAGLVDDTNVFEWIVTIIGPPDTLYDGGYFNAIMTFPA 182
           SQAS           KNPVDGFSAGLVDD+NVFEW VTIIGPPDTLYDGGYFNAIMTFP 
Sbjct: 6   SQASLLLQKQLKDLAKNPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQ 65

Query: 183 NYPNSPPSVRFT 218
           NYPNSPPSVRFT
Sbjct: 66  NYPNSPPSVRFT 77


>ref|NP_001055755.1| Os05g0460200 [Oryza sativa Japonica Group]
           gi|47900319|gb|AAT39166.1| putative
           ubiquitin-conjugating enzyme E2 [Oryza sativa Japonica
           Group] gi|113579306|dbj|BAF17669.1| Os05g0460200 [Oryza
           sativa Japonica Group] gi|125552611|gb|EAY98320.1|
           hypothetical protein OsI_20228 [Oryza sativa Indica
           Group] gi|215704345|dbj|BAG93779.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215767219|dbj|BAG99447.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767276|dbj|BAG99504.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222631853|gb|EEE63985.1| hypothetical protein
           OsJ_18812 [Oryza sativa Japonica Group]
          Length = 169

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/72 (80%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   SQASXXXXXXXXXXMKNPVDGFSAGLVDDTNVFEWIVTIIGPPDTLYDGGYFNAIMTFPA 182
           SQAS           KNPVDGFSAGLVDD+NVFEW VTIIGPPDTLYDGGYFNAIMTFP 
Sbjct: 6   SQASLLLQKQLKDLAKNPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQ 65

Query: 183 NYPNSPPSVRFT 218
           NYPNSPPSVRFT
Sbjct: 66  NYPNSPPSVRFT 77


>ref|NP_001105605.1| ubiquitin-conjugating enzyme protein E2 [Zea mays]
           gi|2641619|gb|AAC12662.1| ubiquitin-conjugating enzyme
           protein E2 [Zea mays] gi|194697250|gb|ACF82709.1|
           unknown [Zea mays] gi|195658631|gb|ACG48783.1|
           ubiquitin-conjugating enzyme E2 7 [Zea mays]
           gi|413945622|gb|AFW78271.1| putative
           ubiquitin-conjugating enzyme family [Zea mays]
          Length = 169

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/72 (79%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   SQASXXXXXXXXXXMKNPVDGFSAGLVDDTNVFEWIVTIIGPPDTLYDGGYFNAIMTFPA 182
           SQAS           KNPVDGFSAGLVDD+N+FEW VTIIGPPDTLYDGGYFNAIMTFP 
Sbjct: 6   SQASLLLQKQLKDLAKNPVDGFSAGLVDDSNIFEWQVTIIGPPDTLYDGGYFNAIMTFPQ 65

Query: 183 NYPNSPPSVRFT 218
           NYPNSPPSVRFT
Sbjct: 66  NYPNSPPSVRFT 77


>ref|XP_003568302.1| PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Brachypodium
           distachyon]
          Length = 169

 Score =  120 bits (300), Expect = 1e-25
 Identities = 57/72 (79%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   SQASXXXXXXXXXXMKNPVDGFSAGLVDDTNVFEWIVTIIGPPDTLYDGGYFNAIMTFPA 182
           SQAS           KNPVDGFSAGLVDD+NVFEW VTIIGPP+TLYDGGYFNAIMTFP 
Sbjct: 6   SQASLLLQKQLRDLSKNPVDGFSAGLVDDSNVFEWQVTIIGPPETLYDGGYFNAIMTFPQ 65

Query: 183 NYPNSPPSVRFT 218
           NYPNSPPSVRFT
Sbjct: 66  NYPNSPPSVRFT 77


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