BLASTX nr result

ID: Dioscorea21_contig00022397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022397
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vit...    81   7e-23
ref|XP_002511110.1| DNA binding protein, putative [Ricinus commu...    80   3e-22
gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulip...    80   4e-22
gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]...    80   6e-22
gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]           80   6e-22

>ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
           gi|297734492|emb|CBI15739.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score = 81.3 bits (199), Expect(2) = 7e-23
 Identities = 40/42 (95%), Positives = 40/42 (95%)
 Frame = -3

Query: 128 HSLAERVRREKISERMKLLQGLVPGCDKVIGKALMLDEIINY 3
           HSLAERVRREKISERMKLLQ LVPGCDKV GKALMLDEIINY
Sbjct: 182 HSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINY 223



 Score = 50.8 bits (120), Expect(2) = 7e-23
 Identities = 25/41 (60%), Positives = 28/41 (68%)
 Frame = -1

Query: 340 EEANYKEGNHQKKAKANDQEGFVHVRARRGQATDSHSLAER 218
           EE    +   QKKA      G++HVRARRGQATDSHSLAER
Sbjct: 147 EEQLKADKKDQKKASEEPPTGYIHVRARRGQATDSHSLAER 187


>ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
           gi|223550225|gb|EEF51712.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 422

 Score = 79.7 bits (195), Expect(2) = 3e-22
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -3

Query: 128 HSLAERVRREKISERMKLLQGLVPGCDKVIGKALMLDEIINY 3
           HSLAERVRREKISERMK+LQ LVPGCDKV GKALMLDEIINY
Sbjct: 183 HSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINY 224



 Score = 50.1 bits (118), Expect(2) = 3e-22
 Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
 Frame = -1

Query: 358 CFNSLPEEANYKEGNHQKKAKANDQE---GFVHVRARRGQATDSHSLAER 218
           C N + E+   K     +K K  DQE   G++HVRARRGQATDSHSLAER
Sbjct: 140 CNNEVKEDKKPKAEKKDQK-KVPDQEPPTGYIHVRARRGQATDSHSLAER 188


>gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
          Length = 321

 Score = 80.1 bits (196), Expect(2) = 4e-22
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -3

Query: 128 HSLAERVRREKISERMKLLQGLVPGCDKVIGKALMLDEIINY 3
           HSLAERVRREKISERMKLLQ LVPGCDKV GKA+MLDEIINY
Sbjct: 146 HSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINY 187



 Score = 49.7 bits (117), Expect(2) = 4e-22
 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 17/65 (26%)
 Frame = -1

Query: 361 SCFNSLPEEANYKEGNH---QKKAKANDQE--------------GFVHVRARRGQATDSH 233
           SC  S+  +   +E      QKK KAN+ +              G++HVRARRGQATDSH
Sbjct: 87  SCMTSVQSKGTKRETKSRKSQKKPKANESDEMKERTQEEEEAPVGYIHVRARRGQATDSH 146

Query: 232 SLAER 218
           SLAER
Sbjct: 147 SLAER 151


>gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
           gi|158147060|gb|ABW22631.1| bHLH transcription factor
           Upa20 [Capsicum annuum] gi|158147061|gb|ABW22632.1| bHLH
           transcription factor Upa20 [Capsicum annuum]
          Length = 340

 Score = 80.5 bits (197), Expect(2) = 6e-22
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -3

Query: 128 HSLAERVRREKISERMKLLQGLVPGCDKVIGKALMLDEIINY 3
           HSLAERVRREKISERMK+LQ LVPGCDKV GKALMLDEIINY
Sbjct: 175 HSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINY 216



 Score = 48.5 bits (114), Expect(2) = 6e-22
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -1

Query: 310 QKKAKANDQEGFVHVRARRGQATDSHSLAER 218
           +KKA      G++HVRARRGQATDSHSLAER
Sbjct: 150 EKKANEEAPTGYIHVRARRGQATDSHSLAER 180


>gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
          Length = 330

 Score = 80.5 bits (197), Expect(2) = 6e-22
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -3

Query: 128 HSLAERVRREKISERMKLLQGLVPGCDKVIGKALMLDEIINY 3
           HSLAERVRREKISERMK+LQ LVPGCDKV GKALMLDEIINY
Sbjct: 164 HSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINY 205



 Score = 48.5 bits (114), Expect(2) = 6e-22
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -1

Query: 310 QKKAKANDQEGFVHVRARRGQATDSHSLAER 218
           +KKA      G++HVRARRGQATDSHSLAER
Sbjct: 139 EKKANEEAPTGYIHVRARRGQATDSHSLAER 169


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