BLASTX nr result
ID: Dioscorea21_contig00022396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00022396 (519 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325704.1| BED finger-nbs-lrr resistance protein [Popul... 71 2e-13 emb|CBI20133.3| unnamed protein product [Vitis vinifera] 75 7e-12 ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca... 74 2e-11 ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul... 74 2e-11 ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Popul... 72 6e-11 >ref|XP_002325704.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222862579|gb|EEF00086.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 533 Score = 71.2 bits (173), Expect(2) = 2e-13 Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Frame = +3 Query: 6 ERVTF-SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKL 182 ER+ F +D+FF H+H LKVLDLS TRI LPDS+S+L +L AL+L C L +PSL KL Sbjct: 341 ERLQFIADSFFTHLHGLKVLDLSRTRIMELPDSVSELASLTALLLEKCKNLRHVPSLEKL 400 Query: 183 HKLRQXXXXXXXXXXELP 236 L++ E+P Sbjct: 401 RALKRLDLSGTTALEEIP 418 Score = 28.9 bits (63), Expect(2) = 2e-13 Identities = 17/44 (38%), Positives = 28/44 (63%) Frame = +1 Query: 343 PHGLENLIKLRHLDISGWVSDWDGDEEWGSFPSGVLLKMSCLEI 474 P G++ L LR+L ++G G++E FPSG+L K+S L++ Sbjct: 418 PQGMQCLSNLRYLRMNGC-----GEKE---FPSGILPKLSHLQV 453 >emb|CBI20133.3| unnamed protein product [Vitis vinifera] Length = 656 Score = 74.7 bits (182), Expect = 7e-12 Identities = 38/62 (61%), Positives = 47/62 (75%) Frame = +3 Query: 12 VTFSDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKL 191 ++F + FF HM NLKVLDLS TRI LPDS+S+LVNL AL L C+ L +PSLAKL +L Sbjct: 288 ISFPNAFFVHMSNLKVLDLSNTRILFLPDSISNLVNLRALFLCRCYTLFHVPSLAKLKEL 347 Query: 192 RQ 197 R+ Sbjct: 348 RE 349 >ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 829 Score = 73.6 bits (179), Expect = 2e-11 Identities = 37/59 (62%), Positives = 43/59 (72%) Frame = +3 Query: 21 SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKLRQ 197 +D+FFKH+ LKVLDLS T I+ LP S SDLVNL AL L CH L +PSLAKL LR+ Sbjct: 478 ADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCHNLRYIPSLAKLRGLRK 536 >ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 1075 Score = 73.6 bits (179), Expect = 2e-11 Identities = 37/59 (62%), Positives = 43/59 (72%) Frame = +3 Query: 21 SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKLRQ 197 +D+FFKH+ LKVLDLS T I+ LP S SDLVNL AL L CH L +PSLAKL LR+ Sbjct: 623 ADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCHNLRYIPSLAKLRGLRK 681 >ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222869827|gb|EEF06958.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 954 Score = 71.6 bits (174), Expect = 6e-11 Identities = 36/59 (61%), Positives = 43/59 (72%) Frame = +3 Query: 21 SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKLRQ 197 +D+FFKH+ LKVLDLS T I+ LP S SDLVNL AL L C L +PSLAKL +LR+ Sbjct: 510 ADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCENLRYIPSLAKLRELRK 568