BLASTX nr result

ID: Dioscorea21_contig00022396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022396
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325704.1| BED finger-nbs-lrr resistance protein [Popul...    71   2e-13
emb|CBI20133.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca...    74   2e-11
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    74   2e-11
ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Popul...    72   6e-11

>ref|XP_002325704.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862579|gb|EEF00086.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 533

 Score = 71.2 bits (173), Expect(2) = 2e-13
 Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +3

Query: 6   ERVTF-SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKL 182
           ER+ F +D+FF H+H LKVLDLS TRI  LPDS+S+L +L AL+L  C  L  +PSL KL
Sbjct: 341 ERLQFIADSFFTHLHGLKVLDLSRTRIMELPDSVSELASLTALLLEKCKNLRHVPSLEKL 400

Query: 183 HKLRQXXXXXXXXXXELP 236
             L++          E+P
Sbjct: 401 RALKRLDLSGTTALEEIP 418



 Score = 28.9 bits (63), Expect(2) = 2e-13
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +1

Query: 343 PHGLENLIKLRHLDISGWVSDWDGDEEWGSFPSGVLLKMSCLEI 474
           P G++ L  LR+L ++G      G++E   FPSG+L K+S L++
Sbjct: 418 PQGMQCLSNLRYLRMNGC-----GEKE---FPSGILPKLSHLQV 453


>emb|CBI20133.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/62 (61%), Positives = 47/62 (75%)
 Frame = +3

Query: 12  VTFSDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKL 191
           ++F + FF HM NLKVLDLS TRI  LPDS+S+LVNL AL L  C+ L  +PSLAKL +L
Sbjct: 288 ISFPNAFFVHMSNLKVLDLSNTRILFLPDSISNLVNLRALFLCRCYTLFHVPSLAKLKEL 347

Query: 192 RQ 197
           R+
Sbjct: 348 RE 349


>ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 829

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/59 (62%), Positives = 43/59 (72%)
 Frame = +3

Query: 21  SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKLRQ 197
           +D+FFKH+  LKVLDLS T I+ LP S SDLVNL AL L  CH L  +PSLAKL  LR+
Sbjct: 478 ADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCHNLRYIPSLAKLRGLRK 536


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/59 (62%), Positives = 43/59 (72%)
 Frame = +3

Query: 21  SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKLRQ 197
           +D+FFKH+  LKVLDLS T I+ LP S SDLVNL AL L  CH L  +PSLAKL  LR+
Sbjct: 623 ADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCHNLRYIPSLAKLRGLRK 681


>ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869827|gb|EEF06958.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 954

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = +3

Query: 21  SDTFFKHMHNLKVLDLSETRIKSLPDSLSDLVNLHALILIDCHELECLPSLAKLHKLRQ 197
           +D+FFKH+  LKVLDLS T I+ LP S SDLVNL AL L  C  L  +PSLAKL +LR+
Sbjct: 510 ADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCENLRYIPSLAKLRELRK 568


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