BLASTX nr result

ID: Dioscorea21_contig00022385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022385
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus ...   150   8e-35
ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_003518436.1| PREDICTED: U-box domain-containing protein 1...   147   9e-34
ref|XP_003616674.1| U-box domain-containing protein [Medicago tr...   143   1e-32

>ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532277|gb|EEF34080.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 695

 Score =  150 bits (380), Expect = 8e-35
 Identities = 67/90 (74%), Positives = 80/90 (88%)
 Frame = +1

Query: 4   NRSVSTPSSFNSMVFNVPDEFRCPITLDLMRDPVIVASGHTYDRSSIARWINSGHHTCPK 183
           NR+    SS +S + NVPDEFRCPI+LDLM+DPVIVASGHTYDR+SIA+WIN G+HTCPK
Sbjct: 272 NRNFDVSSSSHSEILNVPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINEGYHTCPK 331

Query: 184 SGQRLIHMALIPNYALRSLITQWGKENNVP 273
           SGQRLIHMALIPNYAL+SL+ QW ++NN+P
Sbjct: 332 SGQRLIHMALIPNYALKSLVHQWCQDNNIP 361


>ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|222865237|gb|EEF02368.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  150 bits (379), Expect = 1e-34
 Identities = 67/91 (73%), Positives = 81/91 (89%)
 Frame = +1

Query: 1   LNRSVSTPSSFNSMVFNVPDEFRCPITLDLMRDPVIVASGHTYDRSSIARWINSGHHTCP 180
           +NR+    SS  S++ N+PDEFRCPI+LDLM+DPVIVASGHTYDR+SIA+WINSGH TCP
Sbjct: 265 MNRNQDVSSSSQSILSNIPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHQTCP 324

Query: 181 KSGQRLIHMALIPNYALRSLITQWGKENNVP 273
           KSGQRLIHMALIPNYAL+S++ QW ++NNVP
Sbjct: 325 KSGQRLIHMALIPNYALKSMVHQWCQDNNVP 355


>ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|222851063|gb|EEE88610.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  148 bits (374), Expect = 4e-34
 Identities = 66/91 (72%), Positives = 81/91 (89%)
 Frame = +1

Query: 1   LNRSVSTPSSFNSMVFNVPDEFRCPITLDLMRDPVIVASGHTYDRSSIARWINSGHHTCP 180
           +NR+    SS  S++ N+PDEFRCPI+LDLM+DPVIVASGHTYDR+SIA+WINSGHHTCP
Sbjct: 265 MNRNQDVSSSSQSILPNIPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHHTCP 324

Query: 181 KSGQRLIHMALIPNYALRSLITQWGKENNVP 273
           KSG+RLIH +LIPNYAL+SL+ QW ++NNVP
Sbjct: 325 KSGKRLIHTSLIPNYALKSLVHQWCQDNNVP 355


>ref|XP_003518436.1| PREDICTED: U-box domain-containing protein 13-like [Glycine max]
          Length = 682

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/90 (75%), Positives = 77/90 (85%)
 Frame = +1

Query: 4   NRSVSTPSSFNSMVFNVPDEFRCPITLDLMRDPVIVASGHTYDRSSIARWINSGHHTCPK 183
           N+   + SS  SM  NVPDEFRCPI+LDLMRDPVIV+SGH+YDR SIA+WINSGHHTCPK
Sbjct: 266 NKVYDSSSSSQSMTPNVPDEFRCPISLDLMRDPVIVSSGHSYDRISIAQWINSGHHTCPK 325

Query: 184 SGQRLIHMALIPNYALRSLITQWGKENNVP 273
           SGQRLIH ALIPNYAL+SL+ QW  +NNVP
Sbjct: 326 SGQRLIHTALIPNYALKSLVQQWCHDNNVP 355


>ref|XP_003616674.1| U-box domain-containing protein [Medicago truncatula]
           gi|355518009|gb|AES99632.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 736

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/87 (78%), Positives = 75/87 (86%), Gaps = 2/87 (2%)
 Frame = +1

Query: 16  STPSSFNS--MVFNVPDEFRCPITLDLMRDPVIVASGHTYDRSSIARWINSGHHTCPKSG 189
           S+ SSF+   M  N+PDEFRCPI+LDLMRDPVIV+SGHTYDR SIA WINSGHHTCPKSG
Sbjct: 279 SSSSSFSQSMMTVNIPDEFRCPISLDLMRDPVIVSSGHTYDRISIAEWINSGHHTCPKSG 338

Query: 190 QRLIHMALIPNYALRSLITQWGKENNV 270
           QRLIH ALIPNYAL+SL+ QW  ENNV
Sbjct: 339 QRLIHTALIPNYALKSLVHQWCYENNV 365


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