BLASTX nr result

ID: Dioscorea21_contig00022330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022330
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564338.1| carbamoyl phosphate synthetase B [Arabidopsis t...    97   1e-18
ref|XP_003547045.1| PREDICTED: carbamoyl-phosphate synthase larg...    97   1e-18
ref|XP_003542003.1| PREDICTED: carbamoyl-phosphate synthase larg...    97   1e-18
ref|XP_002890837.1| hypothetical protein ARALYDRAFT_473200 [Arab...    97   1e-18
ref|XP_003597156.1| Carbamoyl-phosphate synthase large chain [Me...    97   2e-18

>ref|NP_564338.1| carbamoyl phosphate synthetase B [Arabidopsis thaliana]
           gi|9972356|gb|AAG10606.1|AC008030_6 carbamoyl phosphate
           synthetase large chain (carB) [Arabidopsis thaliana]
           gi|14194125|gb|AAK56257.1|AF367268_1 At1g29900/F1N18_6
           [Arabidopsis thaliana] gi|1477480|gb|AAB67843.1|
           carbamoyl phosphate synthetase large chain [Arabidopsis
           thaliana] gi|22137066|gb|AAM91378.1| At1g29900/F1N18_6
           [Arabidopsis thaliana] gi|332193027|gb|AEE31148.1|
           carbamoyl phosphate synthetase B [Arabidopsis thaliana]
          Length = 1187

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/48 (91%), Positives = 48/48 (100%)
 Frame = +3

Query: 321 TDIKKIMILGAGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNPA 464
           TD+KKIMILGAGPIVIGQACEFDYSGTQACKALR+EGYEV+L+NSNPA
Sbjct: 96  TDLKKIMILGAGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPA 143


>ref|XP_003547045.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Glycine
           max]
          Length = 1161

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/48 (93%), Positives = 48/48 (100%)
 Frame = +3

Query: 321 TDIKKIMILGAGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNPA 464
           TDIKKI+ILGAGPIVIGQACEFDYSGTQACKALR+EGYEVVL+NSNPA
Sbjct: 74  TDIKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLINSNPA 121



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +3

Query: 321 TDIKKIMILGAGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNP 461
           T  KK++ILG GP  IGQ  EFDY    A  AL+D GYE ++VNSNP
Sbjct: 625 TTRKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMVNSNP 671


>ref|XP_003542003.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Glycine
           max]
          Length = 1164

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/48 (93%), Positives = 48/48 (100%)
 Frame = +3

Query: 321 TDIKKIMILGAGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNPA 464
           TDIKKI+ILGAGPIVIGQACEFDYSGTQACKALR+EGYEVVL+NSNPA
Sbjct: 77  TDIKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLINSNPA 124



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +3

Query: 321 TDIKKIMILGAGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNP 461
           T  KK++ILG GP  IGQ  EFDY    A  AL+D GYE ++VNSNP
Sbjct: 628 TTRKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMVNSNP 674


>ref|XP_002890837.1| hypothetical protein ARALYDRAFT_473200 [Arabidopsis lyrata subsp.
           lyrata] gi|297336679|gb|EFH67096.1| hypothetical protein
           ARALYDRAFT_473200 [Arabidopsis lyrata subsp. lyrata]
          Length = 1183

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/48 (91%), Positives = 48/48 (100%)
 Frame = +3

Query: 321 TDIKKIMILGAGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNPA 464
           TD+KKIMILGAGPIVIGQACEFDYSGTQACKALR+EGYEV+L+NSNPA
Sbjct: 92  TDLKKIMILGAGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPA 139


>ref|XP_003597156.1| Carbamoyl-phosphate synthase large chain [Medicago truncatula]
           gi|355486204|gb|AES67407.1| Carbamoyl-phosphate synthase
           large chain [Medicago truncatula]
          Length = 1166

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/48 (91%), Positives = 48/48 (100%)
 Frame = +3

Query: 321 TDIKKIMILGAGPIVIGQACEFDYSGTQACKALRDEGYEVVLVNSNPA 464
           TDIKKI+ILGAGPIVIGQACEFDYSGTQACKALR+EGYEV+L+NSNPA
Sbjct: 80  TDIKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPA 127


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