BLASTX nr result

ID: Dioscorea21_contig00022296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022296
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC74233.1| hypothetical protein OsI_09426 [Oryza sativa Indi...    61   1e-07
dbj|BAJ91360.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
ref|NP_001048504.1| Os02g0815600 [Oryza sativa Japonica Group] g...    59   3e-07
ref|XP_003570387.1| PREDICTED: diphthamide biosynthesis protein ...    59   5e-07
ref|NP_001151030.1| diphthamide biosynthesis protein 1 [Zea mays...    58   7e-07

>gb|EEC74233.1| hypothetical protein OsI_09426 [Oryza sativa Indica Group]
          Length = 220

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -3

Query: 471 CGSVSCGYDCDEAPDYPMDYYAQDGGEWNSAYSKKKASNGAMRRHDGVALGSRIQ 307
           CG  + G D D   +YPMDYY+QDGG+WNS Y KKK S G   R   V +GS++Q
Sbjct: 161 CGCSNGGCDKDFGGEYPMDYYSQDGGDWNSCYMKKKPSTG--ERKLRVRIGSKVQ 213


>dbj|BAJ91360.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 473

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/57 (50%), Positives = 35/57 (61%)
 Frame = -3

Query: 477 GGCGSVSCGYDCDEAPDYPMDYYAQDGGEWNSAYSKKKASNGAMRRHDGVALGSRIQ 307
           G C +  CG D D   +YPMDYY+QDGG+WN  Y KKK S G   R   V +GS +Q
Sbjct: 415 GDCSNGDCGGD-DFGGEYPMDYYSQDGGDWNGCYMKKKPSTG--ERKPRVRIGSNVQ 468


>ref|NP_001048504.1| Os02g0815600 [Oryza sativa Japonica Group]
           gi|47847884|dbj|BAD21677.1| diphthamide synthesis
           DPH2-like [Oryza sativa Japonica Group]
           gi|47848173|dbj|BAD22000.1| diphthamide synthesis
           DPH2-like [Oryza sativa Japonica Group]
           gi|113538035|dbj|BAF10418.1| Os02g0815600 [Oryza sativa
           Japonica Group] gi|215704455|dbj|BAG93889.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765293|dbj|BAG86990.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 474

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/56 (51%), Positives = 36/56 (64%)
 Frame = -3

Query: 474 GCGSVSCGYDCDEAPDYPMDYYAQDGGEWNSAYSKKKASNGAMRRHDGVALGSRIQ 307
           GC +  C  D D   +YPMDYY+QDGG+WNS Y KKK S G   R   V +GS++Q
Sbjct: 415 GCSNGGCA-DKDFGGEYPMDYYSQDGGDWNSCYMKKKPSTG--ERKLRVRIGSKVQ 467


>ref|XP_003570387.1| PREDICTED: diphthamide biosynthesis protein 1-like [Brachypodium
           distachyon]
          Length = 469

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = -3

Query: 477 GGCGSVSCGY-DC---DEAPDYPMDYYAQDGGEWNSAYSKKKASNGAMRRHDGVALGSRI 310
           G CG   C   DC   D   DYPMDYY+QDGG+WN  Y KKK S G   R   V +G+ +
Sbjct: 407 GTCGDCDCSNGDCGGSDFGGDYPMDYYSQDGGDWNGCYMKKKPSTG--ERKPRVRIGNSV 464

Query: 309 Q 307
           Q
Sbjct: 465 Q 465


>ref|NP_001151030.1| diphthamide biosynthesis protein 1 [Zea mays]
           gi|195643774|gb|ACG41355.1| diphthamide biosynthesis
           protein 1 [Zea mays] gi|413939462|gb|AFW74013.1|
           diphthamide biosynthesis protein 1 [Zea mays]
          Length = 482

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/71 (46%), Positives = 37/71 (52%), Gaps = 15/71 (21%)
 Frame = -3

Query: 474 GCGSVSCGYDC---------------DEAPDYPMDYYAQDGGEWNSAYSKKKASNGAMRR 340
           GCGS  CG  C               D   DYPMDYY+QDGG+WNS Y KKK S G   R
Sbjct: 400 GCGS-ECGVGCCSGSGTRGNCNCSDGDYGGDYPMDYYSQDGGDWNSCYMKKKPSTG--ER 456

Query: 339 HDGVALGSRIQ 307
              V +G+ IQ
Sbjct: 457 KLRVRIGNEIQ 467


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