BLASTX nr result

ID: Dioscorea21_contig00022285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022285
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...   115   4e-24
ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein S...   115   4e-24
ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S...   115   4e-24
emb|CAN59901.1| hypothetical protein VITISV_002889 [Vitis vinifera]   115   4e-24
ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [R...   115   5e-24

>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = -1

Query: 169 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTARDGK 2
           MSRSLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLENITYTA+DGK
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGK 56


>ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = -1

Query: 169 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTARDGK 2
           MSRSLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLENITYTA+DGK
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGK 56


>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
           gi|297744494|emb|CBI37756.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = -1

Query: 169 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTARDGK 2
           MSRSLGIPVKLLHEAAGH+VTVELKSGELYRGSMIECEDNWNCQLENIT+TA+DGK
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGK 56


>emb|CAN59901.1| hypothetical protein VITISV_002889 [Vitis vinifera]
          Length = 116

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = -1

Query: 169 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTARDGK 2
           MSRSLGIPVKLLHEAAGH+VTVELKSGELYRGSMIECEDNWNCQLENIT+TA+DGK
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGK 56


>ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
           gi|223551374|gb|EEF52860.1| small nuclear
           ribonucleoprotein, putative [Ricinus communis]
          Length = 131

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = -1

Query: 169 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTARDGK 2
           MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSM+ECEDNWNCQLE+ITYTA+DGK
Sbjct: 1   MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGK 56


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