BLASTX nr result

ID: Dioscorea21_contig00022272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022272
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   145   3e-33
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   141   6e-32
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              141   6e-32
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]   141   6e-32
ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   139   2e-31

>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/129 (55%), Positives = 90/129 (69%)
 Frame = +3

Query: 3    SLSCSLIGKIHAIIKKLTEHPSFTSLLSQYSTLGYSEGKHLTSLVINDLYYHLQGELEGR 182
            SLS SL+ KI  I  KLT HP+F+ LLSQYS  GYSEGK L  L++NDLYYHLQGELEGR
Sbjct: 1202 SLSVSLLQKIRGIFTKLTIHPAFSELLSQYSQRGYSEGKELKKLILNDLYYHLQGELEGR 1261

Query: 183  EMKPGPFKELSKFLLEMEIFECKDHKIEHDMPTSRTVFLFDITYLRAEFQIELWDYSDWR 362
            +M  GPFKELS++L+E        H+   D   ++ ++LFD+  LRA+  +  WD SDWR
Sbjct: 1262 KMGIGPFKELSQYLVESSFLASYQHQFNEDF-FAKNMYLFDLKQLRADLNLGAWDCSDWR 1320

Query: 363  ASKEIAERM 389
             SK+IAE M
Sbjct: 1321 TSKDIAETM 1329


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/130 (50%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3    SLSCSLIGKIHAIIKKLTEHPSFTSLLSQYSTLGYSEGKHLTSLVINDLYYHLQGELEGR 182
            SLS SL+ K+H++ KKL   P+F+ LLSQYS  GYSEGK L  L+++DLYYHLQGEL+GR
Sbjct: 1202 SLSVSLLEKLHSMNKKLGNQPAFSELLSQYSQRGYSEGKELNILILSDLYYHLQGELKGR 1261

Query: 183  EMKPGPFKELSKFLLEMEIFECKDHKIEHDM-PTSRTVFLFDITYLRAEFQIELWDYSDW 359
            ++ PGPFKEL+++LL+ +  +   H+ + D+   ++ V LFD ++L+A+  + +WD+S W
Sbjct: 1262 KIDPGPFKELAQYLLDSQFLQNYRHEYDGDLFAPAKDVHLFDTSHLQADLGLAMWDHSQW 1321

Query: 360  RASKEIAERM 389
            +A+KEIAE M
Sbjct: 1322 KATKEIAETM 1331


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/130 (50%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3    SLSCSLIGKIHAIIKKLTEHPSFTSLLSQYSTLGYSEGKHLTSLVINDLYYHLQGELEGR 182
            SLS SL+ K+H++ KKL   P+F+ LLSQYS  GYSEGK L  L+++DLYYHLQGEL+GR
Sbjct: 1225 SLSVSLLEKLHSMNKKLGNQPAFSELLSQYSQRGYSEGKELNILILSDLYYHLQGELKGR 1284

Query: 183  EMKPGPFKELSKFLLEMEIFECKDHKIEHDM-PTSRTVFLFDITYLRAEFQIELWDYSDW 359
            ++ PGPFKEL+++LL+ +  +   H+ + D+   ++ V LFD ++L+A+  + +WD+S W
Sbjct: 1285 KIDPGPFKELAQYLLDSQFLQNYRHEYDGDLFAPAKDVHLFDTSHLQADLGLAMWDHSQW 1344

Query: 360  RASKEIAERM 389
            +A+KEIAE M
Sbjct: 1345 KATKEIAETM 1354


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/130 (50%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   SLSCSLIGKIHAIIKKLTEHPSFTSLLSQYSTLGYSEGKHLTSLVINDLYYHLQGELEGR 182
           SLS SL+ K+H++ KKL   P+F+ LLSQYS  GYSEGK L  L+++DLYYHLQGEL+GR
Sbjct: 606 SLSVSLLEKLHSMNKKLGNQPAFSELLSQYSQRGYSEGKELNILILSDLYYHLQGELKGR 665

Query: 183 EMKPGPFKELSKFLLEMEIFECKDHKIEHDM-PTSRTVFLFDITYLRAEFQIELWDYSDW 359
           ++ PGPFKEL+++LL+ +  +   H+ + D+   ++ V LFD ++L+A+  + +WD+S W
Sbjct: 666 KIDPGPFKELAQYLLDSQFLQNYRHEYDGDLFAPAKDVHLFDTSHLQADLGLAMWDHSQW 725

Query: 360 RASKEIAERM 389
           +A+KEIAE M
Sbjct: 726 KATKEIAETM 735


>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/133 (50%), Positives = 94/133 (70%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3    SLSCSLIGKIHAIIKKLTEHPSFTSLLSQYSTLGYSEGKHLTSLVINDLYYHLQGELEGR 182
            S+S  L+ KIH I+ KL+ HP+F+ L+SQYS  GYSEGK L  L+++DL+YHLQGELEGR
Sbjct: 1193 SISVLLLQKIHEILTKLSIHPAFSELVSQYSQRGYSEGKELKKLILSDLFYHLQGELEGR 1252

Query: 183  EMKPGPFKELSKFLLEMEIFECKDHKIEHDMPT----SRTVFLFDITYLRAEFQIELWDY 350
            ++  GPFKELS++L+E        H    D  T    ++ V+LFD+ +LR + +++LWD 
Sbjct: 1253 KIDIGPFKELSQYLVESNFLGTYQHLFNEDSFTKNMFTKNVYLFDLAHLREDLRLDLWDC 1312

Query: 351  SDWRASKEIAERM 389
            S+W+ SKEIAE M
Sbjct: 1313 SNWKTSKEIAETM 1325


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