BLASTX nr result
ID: Dioscorea21_contig00022211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00022211
(856 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [S... 190 3e-46
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 189 7e-46
emb|CBI28420.3| unnamed protein product [Vitis vinifera] 189 9e-46
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera] 187 3e-45
ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containi... 186 8e-45
>ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
gi|241932439|gb|EES05584.1| hypothetical protein
SORBIDRAFT_04g028970 [Sorghum bicolor]
Length = 485
Score = 190 bits (483), Expect = 3e-46
Identities = 97/197 (49%), Positives = 140/197 (71%), Gaps = 4/197 (2%)
Frame = -2
Query: 579 LKACSQM-SALHEGMQIHSMVLKINYLST--DVYVQSCLVDVYVKCGRIDVARQVLDGMP 409
L AC+++ +A+ E QIH++++K T DV V + L+ Y + GR+ AR+V DGMP
Sbjct: 63 LAACARLPAAVAEAEQIHALLVKSGVPRTVSDVQVSTSLIRAYARLGRVCDARKVFDGMP 122
Query: 408 ERTVVAGNSIVDGYVKSGDMDSAYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLE 229
+RTVV N ++D V+ GD+D+A+ F+EMP+R++VSWN++I G +N EA+ LF+E
Sbjct: 123 DRTVVTWNVLLDALVRDGDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDLFVE 182
Query: 228 LQLS-GLQPDEHTMSIMISAVSDIGLLAAGKMAHGYIMRRGLSLNGAVGVALTNMYTKCG 52
+ ++ GL PDE TM +SAV DIGLL GK AHGY++RR SL+GA+GVAL +MYT+CG
Sbjct: 183 MTVAYGLAPDEATMVGFVSAVRDIGLLGIGKSAHGYVLRREFSLDGALGVALISMYTRCG 242
Query: 51 SIGAASNVFRSIPAKNV 1
S+GAA + F S+ KNV
Sbjct: 243 SMGAAHSCFLSVTTKNV 259
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 189 bits (480), Expect = 7e-46
Identities = 95/238 (39%), Positives = 145/238 (60%)
Frame = -2
Query: 714 PSTFTYNSLIRTYIQDHLPHHAFFLFNHMLSQCVCLPDKFTFPLVLKACSQMSALHEGMQ 535
P+TF +N++IR Y P A L++HML V + +TFP +LKACS MSAL E Q
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVP-HNAYTFPFLLKACSSMSALEETQQ 139
Query: 534 IHSMVLKINYLSTDVYVQSCLVDVYVKCGRIDVARQVLDGMPERTVVAGNSIVDGYVKSG 355
IH+ ++K+ + +++Y + L++VY K G I AR + D + +R V+ NS++DGY K G
Sbjct: 140 IHAHIIKMGF-GSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCG 198
Query: 354 DMDSAYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLELQLSGLQPDEHTMSIMIS 175
+++ AY F MPER+I+SW S+I GCV P EA+ LF +Q +G++ D + +
Sbjct: 199 EIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQ 258
Query: 174 AVSDIGLLAAGKMAHGYIMRRGLSLNGAVGVALTNMYTKCGSIGAASNVFRSIPAKNV 1
A +D+G+L GK H YI + + ++ +G L +MY KCG + A VFR + K V
Sbjct: 259 ACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316
Score = 64.3 bits (155), Expect = 3e-08
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Frame = -2
Query: 702 TYNSLIRTYIQDHLPHHAFFLFNHMLSQCVCLPDKFTFPLVLKACSQMSALHEGMQIHSM 523
++ S+I + P A LF+ M + + L D L+AC+ + L +G IH+
Sbjct: 217 SWTSMISGCVGAGKPKEALNLFHRMQTAGIKL-DNVALVSTLQACADLGVLDQGKWIHA- 274
Query: 522 VLKINYLSTDVYVQSCLVDVYVKCGRIDVARQVLDGMPERTVVAGNSIVDGYVKSGDMDS 343
Y+K I++ + G ++D Y K GD++
Sbjct: 275 --------------------YIKKHEIEI-----------DPILGCVLIDMYAKCGDLEE 303
Query: 342 AYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLELQLSGLQPDEHTMSIMISAVSD 163
A F +M E+ + W ++I G + EA+ F+++Q +G++P++ T + +++A S
Sbjct: 304 AIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH 363
Query: 162 IGLLAAGKMAHGYIMR-RGLSLNGAVGVALTNMYTKCGSIGAASNVFRSIPAK 7
GL+ K+ + R G + + ++ + G + A + ++P K
Sbjct: 364 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVK 416
>emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 189 bits (479), Expect = 9e-46
Identities = 98/251 (39%), Positives = 148/251 (58%), Gaps = 11/251 (4%)
Frame = -2
Query: 720 QPPSTFTYNSLIRTYIQDHLPHHAFFLFNHMLSQCVCLPDKFTFPLVLKACSQMSALHEG 541
Q S +N++I+ Y+++ H LF+ ++ + LPD FT P V+K C+++ + EG
Sbjct: 77 QRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEY--LPDNFTLPCVIKGCARLGVVQEG 134
Query: 540 MQIHSMVLKINYLSTDVYVQSCLVDVYVKCGRIDVARQVLDGMPERTVVAGNSIVDG--- 370
QIH + LKI + +DV+VQ LV++Y KCG ID AR+V DGM ++ VV NS++DG
Sbjct: 135 KQIHGLALKIGF-GSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLV 193
Query: 369 --------YVKSGDMDSAYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLELQLSG 214
Y+KSGD DSA F +MP D+V+WN +I G N +A+ +F + G
Sbjct: 194 SWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 253
Query: 213 LQPDEHTMSIMISAVSDIGLLAAGKMAHGYIMRRGLSLNGAVGVALTNMYTKCGSIGAAS 34
+P T+ ++SAVS + +L G+ H Y+ + G L+G +G +L MY KCG I +A
Sbjct: 254 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESAL 313
Query: 33 NVFRSIPAKNV 1
VFR+I K V
Sbjct: 314 TVFRAIQKKKV 324
Score = 69.3 bits (168), Expect = 1e-09
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = -2
Query: 363 KSGDMDSAYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLELQLSGLQPDEHTMSI 184
K D+ A F + R ++ WN++I V+N ++ I LF EL L PD T+
Sbjct: 62 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPC 120
Query: 183 MISAVSDIGLLAAGKMAHGYIMRRGLSLNGAVGVALTNMYTKCGSIGAASNVFRSIPAKN 4
+I + +G++ GK HG ++ G + V +L NMY+KCG I A VF + K+
Sbjct: 121 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 180
Query: 3 V 1
V
Sbjct: 181 V 181
>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 187 bits (474), Expect = 3e-45
Identities = 94/238 (39%), Positives = 144/238 (60%)
Frame = -2
Query: 714 PSTFTYNSLIRTYIQDHLPHHAFFLFNHMLSQCVCLPDKFTFPLVLKACSQMSALHEGMQ 535
P+TF +N++IR Y P A L++HML V + +TFP +LKACS MSA E Q
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVP-HNAYTFPFLLKACSSMSASEETQQ 139
Query: 534 IHSMVLKINYLSTDVYVQSCLVDVYVKCGRIDVARQVLDGMPERTVVAGNSIVDGYVKSG 355
IH+ ++K+ + +++Y + L++VY K G I AR + D + +R V+ NS++DGY K G
Sbjct: 140 IHAHIIKMGF-GSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCG 198
Query: 354 DMDSAYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLELQLSGLQPDEHTMSIMIS 175
+++ AY F MPER+I+SW S+I GCV P EA+ LF +Q +G++ D + +
Sbjct: 199 EIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQ 258
Query: 174 AVSDIGLLAAGKMAHGYIMRRGLSLNGAVGVALTNMYTKCGSIGAASNVFRSIPAKNV 1
A +D+G+L GK H YI + + ++ +G L +MY KCG + A VFR + K V
Sbjct: 259 ACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316
Score = 64.3 bits (155), Expect = 3e-08
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Frame = -2
Query: 702 TYNSLIRTYIQDHLPHHAFFLFNHMLSQCVCLPDKFTFPLVLKACSQMSALHEGMQIHSM 523
++ S+I + P A LF+ M + + L D L+AC+ + L +G IH+
Sbjct: 217 SWTSMISGCVGAGKPKEALNLFHRMQTAGIKL-DNVALVSTLQACADLGVLDQGKWIHA- 274
Query: 522 VLKINYLSTDVYVQSCLVDVYVKCGRIDVARQVLDGMPERTVVAGNSIVDGYVKSGDMDS 343
Y+K I++ + G ++D Y K GD++
Sbjct: 275 --------------------YIKKHEIEI-----------DPILGCVLIDMYAKCGDLEE 303
Query: 342 AYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLELQLSGLQPDEHTMSIMISAVSD 163
A F +M E+ + W ++I G + EA+ F+++Q +G++P++ T + +++A S
Sbjct: 304 AIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH 363
Query: 162 IGLLAAGKMAHGYIMR-RGLSLNGAVGVALTNMYTKCGSIGAASNVFRSIPAK 7
GL+ K+ + R G + + ++ + G + A + ++P K
Sbjct: 364 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVK 416
>ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 186 bits (471), Expect = 8e-45
Identities = 89/230 (38%), Positives = 146/230 (63%)
Frame = -2
Query: 714 PSTFTYNSLIRTYIQDHLPHHAFFLFNHMLSQCVCLPDKFTFPLVLKACSQMSALHEGMQ 535
P+TF +N++IR Y P AF + MLS V + +TFP +L+AC + A+ E +Q
Sbjct: 51 PNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVP-HNSYTFPFLLRACRNLLAMGEALQ 109
Query: 534 IHSMVLKINYLSTDVYVQSCLVDVYVKCGRIDVARQVLDGMPERTVVAGNSIVDGYVKSG 355
+H +V+K+ + +DV+ + L+ VY CG I ARQ+ D +PER V+ N ++DGY+KSG
Sbjct: 110 VHGLVIKLGF-GSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSG 168
Query: 354 DMDSAYRSFIEMPERDIVSWNSLIGGCVQNSLPNEAIALFLELQLSGLQPDEHTMSIMIS 175
D+ +AY F++MP +++VSW SLI G V+ EA++L E+Q +G + D ++ +++
Sbjct: 169 DVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLT 228
Query: 174 AVSDIGLLAAGKMAHGYIMRRGLSLNGAVGVALTNMYTKCGSIGAASNVF 25
A +++G L G+ H Y++ G+ ++ +G AL NMY KCG + A +VF
Sbjct: 229 ACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVF 278