BLASTX nr result

ID: Dioscorea21_contig00022207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022207
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   142   2e-32
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   142   2e-32
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   142   2e-32
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...   131   6e-29
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29

>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  142 bits (359), Expect = 2e-32
 Identities = 82/127 (64%), Positives = 85/127 (66%)
 Frame = -3

Query: 388 MSFSQHGPRGICILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 209
           MSFSQHGPR +CILSANGAISNVTLRQAATSGGTVTYEGRFEI             GQRS
Sbjct: 191 MSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLLSESGGQRS 250

Query: 208 RTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADRRKEPKSTNFSDPASAPGK 29
           RTGGLSVS                   ASPVQVVVGSFIAD +KEPK T  SDP  APGK
Sbjct: 251 RTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGKKEPKHTAPSDPTLAPGK 310

Query: 28  IAPIGMA 8
           +A  G A
Sbjct: 311 LAAGGAA 317


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
           gi|297745600|emb|CBI40765.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  142 bits (359), Expect = 2e-32
 Identities = 81/128 (63%), Positives = 86/128 (67%)
 Frame = -3

Query: 388 MSFSQHGPRGICILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 209
           MSFSQHGPR +CILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRS
Sbjct: 180 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRS 239

Query: 208 RTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADRRKEPKSTNFSDPASAPGK 29
           RTGGLSVS                   ASPVQVVVGSFIAD RKE KS +  +P+SAP K
Sbjct: 240 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPK 299

Query: 28  IAPIGMAG 5
           IAP+G  G
Sbjct: 300 IAPVGGGG 307


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  142 bits (359), Expect = 2e-32
 Identities = 81/128 (63%), Positives = 86/128 (67%)
 Frame = -3

Query: 388 MSFSQHGPRGICILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 209
           MSFSQHGPR +CILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRS
Sbjct: 180 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRS 239

Query: 208 RTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADRRKEPKSTNFSDPASAPGK 29
           RTGGLSVS                   ASPVQVVVGSFIAD RKE KS +  +P+SAP K
Sbjct: 240 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPK 299

Query: 28  IAPIGMAG 5
           IAP+G  G
Sbjct: 300 IAPVGGGG 307


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
           gi|223551427|gb|EEF52913.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 374

 Score =  131 bits (329), Expect = 6e-29
 Identities = 76/130 (58%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = -3

Query: 388 MSFSQHGPRGICILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 209
           MSFSQHGPR +CILSANGAISNVTLRQ ATSGG+VTYEGRFEI             GQRS
Sbjct: 204 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRS 263

Query: 208 RTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADRRKEPKSTNFSDPASAPGK 29
           RTGGLSVS                   ASPVQVVV SFI+D RKE KS N  +P SA  +
Sbjct: 264 RTGGLSVSLSGPDGRVLGGGVAGLLLAASPVQVVVASFISDDRKELKSPNHLEPLSAMNR 323

Query: 28  IAPI-GMAGP 2
           + P+ G  GP
Sbjct: 324 LTPVMGTTGP 333


>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  131 bits (329), Expect = 6e-29
 Identities = 73/125 (58%), Positives = 82/125 (65%)
 Frame = -3

Query: 388 MSFSQHGPRGICILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 209
           MSFSQHGPR +CILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRS
Sbjct: 102 MSFSQHGPRAVCILSANGAISNVTLRQQATSGGTVTYEGRFEILALSGSYLPSENGGQRS 161

Query: 208 RTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADRRKEPKSTNFSDPASAPGK 29
           R+GGLSV                    A+PVQVVVGSFIAD RKE K+ N ++P+SA  +
Sbjct: 162 RSGGLSVCLSGPDGRVLGGTVAGLLVAAAPVQVVVGSFIADGRKESKTANHTEPSSATSR 221

Query: 28  IAPIG 14
           + P G
Sbjct: 222 LPPRG 226


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