BLASTX nr result

ID: Dioscorea21_contig00022193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022193
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-bin...    70   2e-10
gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]         67   1e-09
emb|CBI27664.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...    67   2e-09
emb|CAN84019.1| hypothetical protein VITISV_037586 [Vitis vinifera]    66   3e-09

>ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-binding protein SPL10
           [Vitis vinifera]
          Length = 506

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +1

Query: 76  VMDWNARTPPPWDWESLALFSGKISELPKGEQESQWRID---GIGNGSVYSFGVGACSGS 246
           VM+WN RTP  WDWE+L  F+ K  E P   Q S   I+   G+ NGSVYS G G  SGS
Sbjct: 6   VMEWNLRTPSEWDWETLTAFNTKAFEFPGRVQLSNHDIEVDGGVDNGSVYSSGGGGFSGS 65

Query: 247 EFFNGCSPKSSFSAS 291
           +  +G S +SS S S
Sbjct: 66  DLGHGSSSRSSISVS 80


>gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]
          Length = 500

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
 Frame = +1

Query: 79  MDWNARTPPPWDWESLALFSGKISELPKGEQESQWRID---GIGNGSVYSFGVGACSGSE 249
           M+WN RTP  WDWE+L  F+ +  E P   Q S   I+   G+ NGSVYS G G  SGS+
Sbjct: 1   MEWNLRTPSEWDWETLTAFNTRAFEFPGRVQLSNHDIEVDGGVDNGSVYSSGGGGFSGSD 60

Query: 250 FFNGCSPKSSFSAS 291
             +G S +SS S S
Sbjct: 61  LGHGSSSRSSISVS 74


>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
 Frame = +1

Query: 76  VMDWNARTPPPWDWESLALFSGKISELPKGEQESQWRID---GIGNGSVYSFGVGA---C 237
           +M+WNA+ P  WDWE+L +F+ K +E+PK + +S W I+   GI  GS YS G GA    
Sbjct: 6   MMEWNAKAPVQWDWENLDIFNAKSTEIPK-KLQSDWEIEGEGGIDTGSFYSSGCGAGSGG 64

Query: 238 SGSEFFNGCSPKSSFSAS 291
           SGS+  +  S KSS SAS
Sbjct: 65  SGSDLGHAYSSKSSKSAS 82


>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
           vinifera]
          Length = 477

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
 Frame = +1

Query: 76  VMDWNARTPPPWDWESLALFSGKISELPKGEQESQWRID---GIGNGSVYSFGVGA---C 237
           +M+WNA+ P  WDWE+L +F+ K +E+PK + +S W I+   GI  GS YS G GA    
Sbjct: 6   MMEWNAKAPVQWDWENLDIFNAKSTEIPK-KLQSDWEIEGEGGIDTGSFYSSGCGAGSGG 64

Query: 238 SGSEFFNGCSPKSSFSAS 291
           SGS+  +  S KSS SAS
Sbjct: 65  SGSDLGHAYSSKSSKSAS 82


>emb|CAN84019.1| hypothetical protein VITISV_037586 [Vitis vinifera]
          Length = 636

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +1

Query: 79  MDWNARTPPPWDWESLALFSGKISELPKGEQESQWRID---GIGNGSVYSFGVGACSGSE 249
           + WN RTP  WDWE+L  F+ K  E P   Q S   I+   G+ NGSVYS G G  SGS+
Sbjct: 123 LKWNLRTPSEWDWETLTAFNTKAFEFPGRVQLSNHDIEVDGGVDNGSVYSSGGGGFSGSD 182

Query: 250 FFNGCSPKSSFSAS 291
             +G S +SS S S
Sbjct: 183 LGHGSSSRSSISVS 196


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