BLASTX nr result

ID: Dioscorea21_contig00022178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022178
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177390.1| putative leucine-rich repeat transmembrane prot...    44   6e-08
emb|CBI35843.3| unnamed protein product [Vitis vinifera]               43   7e-08
emb|CAN83804.1| hypothetical protein VITISV_015737 [Vitis vinifera]    43   7e-08
ref|XP_003632778.1| PREDICTED: probable inactive leucine-rich re...    43   7e-08
ref|XP_002331202.1| predicted protein [Populus trichocarpa] gi|2...    42   7e-08

>ref|NP_177390.1| putative leucine-rich repeat transmembrane protein kinase
           [Arabidopsis thaliana]
           gi|12325265|gb|AAG52572.1|AC016529_3 putative
           receptor-like protein kinase; 33719-31696 [Arabidopsis
           thaliana] gi|224589481|gb|ACN59274.1| leucine-rich
           repeat receptor-like protein kinase [Arabidopsis
           thaliana] gi|332197206|gb|AEE35327.1| putative
           leucine-rich repeat transmembrane protein kinase
           [Arabidopsis thaliana]
          Length = 644

 Score = 43.5 bits (101), Expect(2) = 6e-08
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
 Frame = +2

Query: 11  VAGLRLEHLGFLGKLNPIPLKQFPGLRAISLARNSLSD-------VVALCALCLQANNFS 169
           V GL++E +G  GK++  PLK  P LR IS+  NS S        + AL +L +  N FS
Sbjct: 67  VFGLQIEQMGLSGKVDVAPLKDLPSLRTISIMNNSFSGDIPEFNRLTALKSLYISGNRFS 126

Query: 170 HTI 178
             I
Sbjct: 127 GNI 129



 Score = 38.1 bits (87), Expect(2) = 6e-08
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 183 NHLSKMTRLRKINLPRNHFSGAIPI-LISQAKSLVILYLEGNQLSGSI 323
           ++   M  L+K  L  NHFSG IPI L +   +L+ L LE NQ  GSI
Sbjct: 132 DYFETMVSLKKAWLSNNHFSGLIPISLATTLPNLIELRLENNQFIGSI 179


>emb|CBI35843.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score = 42.7 bits (99), Expect(2) = 7e-08
 Identities = 20/48 (41%), Positives = 31/48 (64%)
 Frame = +3

Query: 180 PNHLSKMTRLRKINLPRNHFSGAIPILISQAKSLVILYLEGNQLSGSI 323
           P++  +M  L+K+ L  N F+GAIP+ I     L+ L+LE NQ +G+I
Sbjct: 132 PDYFVRMASLKKLWLSDNKFTGAIPLSIQLLSHLIELHLENNQFTGTI 179



 Score = 38.5 bits (88), Expect(2) = 7e-08
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
 Frame = +2

Query: 2   NGFVAGLRLEHLGFLGKLNPIPLKQFPGLRAISLARNSLSDVV-------ALCALCLQAN 160
           NG V GL L  +G  GK++   L    GLR IS+  NS S  +       AL A+ +  N
Sbjct: 65  NGIVTGLHLVGMGLSGKIDVEALIAITGLRTISIVNNSFSGSIPEFNRLGALKAIFISGN 124

Query: 161 NFSHTI 178
            FS  I
Sbjct: 125 QFSGEI 130


>emb|CAN83804.1| hypothetical protein VITISV_015737 [Vitis vinifera]
          Length = 686

 Score = 42.7 bits (99), Expect(2) = 7e-08
 Identities = 20/48 (41%), Positives = 31/48 (64%)
 Frame = +3

Query: 180 PNHLSKMTRLRKINLPRNHFSGAIPILISQAKSLVILYLEGNQLSGSI 323
           P++  +M  L+K+ L  N F+GAIP+ I     L+ L+LE NQ +G+I
Sbjct: 132 PDYFVRMASLKKLWLSDNKFTGAIPLSIQLLSHLIELHLENNQFTGTI 179



 Score = 38.5 bits (88), Expect(2) = 7e-08
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
 Frame = +2

Query: 2   NGFVAGLRLEHLGFLGKLNPIPLKQFPGLRAISLARNSLSDVV-------ALCALCLQAN 160
           NG V GL L  +G  GK++   L    GLR IS+  NS S  +       AL A+ +  N
Sbjct: 65  NGIVTGLHLVGMGLSGKIDVEALIAITGLRTISIVNNSFSGSIPEFNRSGALKAIFISGN 124

Query: 161 NFSHTI 178
            FS  I
Sbjct: 125 QFSGEI 130


>ref|XP_003632778.1| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At5g20690-like [Vitis vinifera]
          Length = 664

 Score = 42.7 bits (99), Expect(2) = 7e-08
 Identities = 20/48 (41%), Positives = 31/48 (64%)
 Frame = +3

Query: 180 PNHLSKMTRLRKINLPRNHFSGAIPILISQAKSLVILYLEGNQLSGSI 323
           P++  +M  L+K+ L  N F+GAIP+ I     L+ L+LE NQ +G+I
Sbjct: 110 PDYFVRMASLKKLWLSDNKFTGAIPLSIQLLSHLIELHLENNQFTGTI 157



 Score = 38.5 bits (88), Expect(2) = 7e-08
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
 Frame = +2

Query: 2   NGFVAGLRLEHLGFLGKLNPIPLKQFPGLRAISLARNSLSDVV-------ALCALCLQAN 160
           NG V GL L  +G  GK++   L    GLR IS+  NS S  +       AL A+ +  N
Sbjct: 43  NGIVTGLHLVGMGLSGKIDVEALIAITGLRTISIVNNSFSGSIPEFNRLGALKAIFISGN 102

Query: 161 NFSHTI 178
            FS  I
Sbjct: 103 QFSGEI 108


>ref|XP_002331202.1| predicted protein [Populus trichocarpa] gi|222873323|gb|EEF10454.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score = 42.4 bits (98), Expect(2) = 7e-08
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
 Frame = +2

Query: 2   NGFVAGLRLEHLGFLGKLNPIPLKQFPGLRAISLARNSLSDVVA-------LCALCLQAN 160
           NG V GL+LE++G  G ++   L    GLR++S ARNS +  +        L A+ L+ N
Sbjct: 57  NGIVTGLQLENMGLSGTIDVDALATIQGLRSLSFARNSFTGAIPELNRLGNLKAIYLRGN 116

Query: 161 NFSHTI 178
            FS  I
Sbjct: 117 QFSGEI 122



 Score = 38.9 bits (89), Expect(2) = 7e-08
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 192 SKMTRLRKINLPRNHFSGAIPILISQAKSLVILYLEGNQLSGSI 323
           SKM  L+K+ L  N F+G IP  +++   L  L+LE NQ SG+I
Sbjct: 128 SKMKSLKKVWLSDNKFTGGIPPSLAELPRLSELHLENNQFSGTI 171


Top