BLASTX nr result

ID: Dioscorea21_contig00022164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022164
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513717.1| expressed protein, putative [Ricinus communi...    73   3e-11
gb|EAY76601.1| hypothetical protein OsI_04550 [Oryza sativa Indi...    70   1e-10
gb|EEE55720.1| hypothetical protein OsJ_04192 [Oryza sativa Japo...    69   4e-10
ref|NP_001044899.2| Os01g0865600 [Oryza sativa Japonica Group] g...    69   4e-10
ref|XP_002298267.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_002513717.1| expressed protein, putative [Ricinus communis]
           gi|223547168|gb|EEF48664.1| expressed protein, putative
           [Ricinus communis]
          Length = 933

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
 Frame = -1

Query: 331 AGIQTIAIIPVLPFGVVQLGSTQMVIENIGFINHVRCLFAQLGSVSGTFTSD-------- 176
           AG+QTIA+IPV P GVVQLGS+  ++EN+GF+N+V+ L  QLG V G   SD        
Sbjct: 130 AGMQTIAVIPVCPHGVVQLGSSSTIMENLGFVNNVKSLILQLGCVPGALLSDNFGVKEAT 189

Query: 175 ------VTQKAFSKNSILQASPAVPDFTCLSGEFGAQAVSSLPAISGRVFHQP 35
                 V+       S+  +   V +   L+  +  Q+VSSLP+   +  H P
Sbjct: 190 ERIRVPVSLGTTDSISLHLSGNKVLNSFSLANNYNQQSVSSLPSRIAQASHSP 242


>gb|EAY76601.1| hypothetical protein OsI_04550 [Oryza sativa Indica Group]
          Length = 895

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
 Frame = -1

Query: 331 AGIQTIAIIPVLPFGVVQLGSTQMVIENIGFINHVRCLFAQLGSVSGTFTSDVTQKAFSK 152
           AGIQTIA+IPVLP GV+QLGST+MV+E   FI+HVR LF QLGS     T+ V   +F +
Sbjct: 155 AGIQTIAVIPVLPRGVIQLGSTKMVMEEAAFIDHVRSLFQQLGS----STAVVPCGSFVQ 210

Query: 151 NSILQA----SPAVPDFTCLSGEFGAQAVSSLPAISGRVFHQPDQRST 20
           +SI++     S  VP  + L    G     +   I+ +  HQ    ST
Sbjct: 211 DSIMRTPFHKSLGVPTSSHLEDLAGGGNTYNDDMINHQFRHQKSPAST 258


>gb|EEE55720.1| hypothetical protein OsJ_04192 [Oryza sativa Japonica Group]
          Length = 904

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
 Frame = -1

Query: 331 AGIQTIAIIPVLPFGVVQLGSTQMVIENIGFINHVRCLFAQLGSVS-----GTFTSD 176
           AGIQTIA+IPVLP GV+QLGST+MV+E   FI+HVR LF QLGS +     G+F  D
Sbjct: 155 AGIQTIAVIPVLPRGVIQLGSTKMVMEEAAFIDHVRSLFQQLGSSTAVVPCGSFVQD 211


>ref|NP_001044899.2| Os01g0865600 [Oryza sativa Japonica Group]
           gi|56785189|dbj|BAD81907.1| bHLH transcription
           factor-like protein [Oryza sativa Japonica Group]
           gi|215695529|dbj|BAG90720.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255673901|dbj|BAF06813.2| Os01g0865600 [Oryza sativa
           Japonica Group]
          Length = 904

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
 Frame = -1

Query: 331 AGIQTIAIIPVLPFGVVQLGSTQMVIENIGFINHVRCLFAQLGSVS-----GTFTSD 176
           AGIQTIA+IPVLP GV+QLGST+MV+E   FI+HVR LF QLGS +     G+F  D
Sbjct: 155 AGIQTIAVIPVLPRGVIQLGSTKMVMEEAAFIDHVRSLFQQLGSSTAVVPCGSFVQD 211


>ref|XP_002298267.1| predicted protein [Populus trichocarpa] gi|222845525|gb|EEE83072.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
 Frame = -1

Query: 331 AGIQTIAIIPVLPFGVVQLGSTQMVIENIGFINHVRCLFAQLGSVSGTFTSDVTQKAFSK 152
           AG+QTIA+IPV P GV+QLGS+  ++ENIGF+N+V+ L  QLG V G   SD   +    
Sbjct: 113 AGMQTIAVIPVCPHGVLQLGSSVAILENIGFVNNVKSLILQLGCVPGALLSDNHMEKEPT 172

Query: 151 NSI---LQASPAVPDFTCLSGEFGAQAVSSLPAIS 56
             I   +    A+P   C SG +  +  SS P+++
Sbjct: 173 ERIGMPISCGMALP--VCFSGNY--KVPSSTPSLA 203


Top