BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022153
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   213   9e-58
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   211   2e-57
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   197   3e-48
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...   178   2e-46
ref|XP_002521565.1| pentatricopeptide repeat-containing protein,...   173   3e-46

>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  213 bits (541), Expect(2) = 9e-58
 Identities = 112/208 (53%), Positives = 144/208 (69%)
 Frame = +3

Query: 198 VLCLAENQMAGLLPHPANQVSLLDKSSCKKEIKQIHAHMIKTGLILDTFPASRLLATICQ 377
           +LC   +Q++    + A  + LL + S  +E++QIH  M+KTGLILD  PAS+LLA  C 
Sbjct: 4   ILCTPTSQLSSE-SNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLA-FCA 61

Query: 378 SFDIECLNYAHQVLERTENANTLMWNTMIRAYSCSDNPDEAILIYVQMLHNVVPWNTYTF 557
           S +   L YA  V +R    NT MWNTMIR YS S  P+EA+L+Y  ML++ VP N YTF
Sbjct: 62  SPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTF 121

Query: 558 PFLLKACAEVLPDMEETKQIHCQIIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGIS 737
           PFLLKAC+  +  +EET+QIH  IIK G  SE+Y  NSLL++Y+KSGD  SAR +FD + 
Sbjct: 122 PFLLKACSS-MSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVD 180

Query: 738 CRDAVSWNSMIDGYTKSGQIEMARELFD 821
            RD VSWNSMIDGYTK G+IEMA E+F+
Sbjct: 181 QRDTVSWNSMIDGYTKCGEIEMAYEIFN 208



 Score = 38.1 bits (87), Expect(2) = 9e-58
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = +2

Query: 827 WTAIINGLALHGRATEALDLFKEMEGAGLKPNNITFTSLL 946
           WT++I+G    G+  EAL+LF  M+ AG+K +N+   S L
Sbjct: 218 WTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 35/244 (14%)
 Frame = +3

Query: 192 QQVLCLAENQMAGLLPHPANQVSLLDKS----SCKKEIKQIHAHMIKTGLILDTFPASRL 359
           ++ L L  + +   +PH A     L K+    S  +E +QIHAH+IK G   + +  + L
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSL 159

Query: 360 LATICQSFDIECLNYAHQVLERTENANTLMWNTMIRAYS-CSD----------------- 485
           L    +S DI+    A  + ++ +  +T+ WN+MI  Y+ C +                 
Sbjct: 160 LNVYSKSGDIKS---ARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNII 216

Query: 486 -------------NPDEAILIYVQMLHNVVPWNTYTFPFLLKACAEVLPDMEETKQIHCQ 626
                         P EA+ ++ +M    +  +       L+ACA+ L  +++ K IH  
Sbjct: 217 SWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD-LGVLDQGKWIHAY 275

Query: 627 IIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGISCRDAVSWNSMIDGYTKSGQIEMA 806
           I K+ +  +      L+ +YAK GD   A +VF  +  +    W +MI GY   G+   A
Sbjct: 276 IKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREA 335

Query: 807 RELF 818
            E F
Sbjct: 336 LEWF 339



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 24/42 (57%), Positives = 34/42 (80%)
 Frame = +2

Query: 821 SVWTAIINGLALHGRATEALDLFKEMEGAGLKPNNITFTSLL 946
           SVWTA+I+G A+HGR  EAL+ F +M+ AG++PN +TFT +L
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGIL 358


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  211 bits (538), Expect(2) = 2e-57
 Identities = 112/208 (53%), Positives = 143/208 (68%)
 Frame = +3

Query: 198 VLCLAENQMAGLLPHPANQVSLLDKSSCKKEIKQIHAHMIKTGLILDTFPASRLLATICQ 377
           +LC   +Q++    + A  + LL + S  +E++QIH  M+KTGLILD  PAS+LLA  C 
Sbjct: 4   ILCTPTSQLSSE-SNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLA-FCA 61

Query: 378 SFDIECLNYAHQVLERTENANTLMWNTMIRAYSCSDNPDEAILIYVQMLHNVVPWNTYTF 557
           S +   L YA  V +R    NT MWNTMIR YS S  P+EA+L+Y  ML++ VP N YTF
Sbjct: 62  SPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTF 121

Query: 558 PFLLKACAEVLPDMEETKQIHCQIIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGIS 737
           PFLLKAC+ +    EET+QIH  IIK G  SE+Y  NSLL++Y+KSGD  SAR +FD + 
Sbjct: 122 PFLLKACSSMSAS-EETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVD 180

Query: 738 CRDAVSWNSMIDGYTKSGQIEMARELFD 821
            RD VSWNSMIDGYTK G+IEMA E+F+
Sbjct: 181 QRDTVSWNSMIDGYTKCGEIEMAYEIFN 208



 Score = 38.1 bits (87), Expect(2) = 2e-57
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = +2

Query: 827 WTAIINGLALHGRATEALDLFKEMEGAGLKPNNITFTSLL 946
           WT++I+G    G+  EAL+LF  M+ AG+K +N+   S L
Sbjct: 218 WTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 35/244 (14%)
 Frame = +3

Query: 192 QQVLCLAENQMAGLLPHPANQVSLLDKS----SCKKEIKQIHAHMIKTGLILDTFPASRL 359
           ++ L L  + +   +PH A     L K+    S  +E +QIHAH+IK G   + +  + L
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSL 159

Query: 360 LATICQSFDIECLNYAHQVLERTENANTLMWNTMIRAYS-CSD----------------- 485
           L    +S DI+    A  + ++ +  +T+ WN+MI  Y+ C +                 
Sbjct: 160 LNVYSKSGDIKS---ARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNII 216

Query: 486 -------------NPDEAILIYVQMLHNVVPWNTYTFPFLLKACAEVLPDMEETKQIHCQ 626
                         P EA+ ++ +M    +  +       L+ACA+ L  +++ K IH  
Sbjct: 217 SWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD-LGVLDQGKWIHAY 275

Query: 627 IIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGISCRDAVSWNSMIDGYTKSGQIEMA 806
           I K+ +  +      L+ +YAK GD   A +VF  +  +    W +MI GY   G+   A
Sbjct: 276 IKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREA 335

Query: 807 RELF 818
            E F
Sbjct: 336 LEWF 339



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 24/42 (57%), Positives = 34/42 (80%)
 Frame = +2

Query: 821 SVWTAIINGLALHGRATEALDLFKEMEGAGLKPNNITFTSLL 946
           SVWTA+I+G A+HGR  EAL+ F +M+ AG++PN +TFT +L
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGIL 358


>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  197 bits (501), Expect = 3e-48
 Identities = 108/218 (49%), Positives = 138/218 (63%), Gaps = 6/218 (2%)
 Frame = +3

Query: 255 VSLLDKSSCKKEIKQIHAHMIKTGLILDTFPASRLLATICQSFDIECLNYAHQVLERTEN 434
           +SLL++ S   E+KQIH  ++K G I      SRLL T   S +   L YA  V +R  +
Sbjct: 15  MSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYA-SMEFSNLTYARMVFDRISS 73

Query: 435 ANTLMWNTMIRAYSCSDNPDEAILIYVQMLHNVVPWNTYTFPFLLKACAEVLPDMEETKQ 614
            NT+MWNTMIRAYS S++P+EA+L+Y QMLH+ +P N YTFPFLLKAC+  L  + ET Q
Sbjct: 74  PNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACS-ALSALAETHQ 132

Query: 615 IHCQIIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGISCRDAVSWNSMIDGYTKSGQ 794
           IH QIIK G  SEVYA NSLL +YA SG   SA  +FD +  RD VSWN+MIDGY K G 
Sbjct: 133 IHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGN 192

Query: 795 IEMARELF------DLFGQPSSMVSHSMAGQQKLLICL 890
           +EMA ++F      ++    S +V     G  K  +CL
Sbjct: 193 VEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCL 230



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 60/244 (24%), Positives = 96/244 (39%), Gaps = 35/244 (14%)
 Frame = +3

Query: 192 QQVLCLAENQMAGLLPHPANQVSLLDKS----SCKKEIKQIHAHMIKTGLILDTFPASRL 359
           ++ L L    +   +PH A     L K+    S   E  QIH  +IK G   + +  + L
Sbjct: 93  EEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSL 152

Query: 360 LATICQSFDIECLNYAHQVLERTENANTLMWNTMIRAYSCSDNPDEAILIYVQMLH-NVV 536
           L     S  I+    AH + +   + + + WNTMI  Y    N + A  I+  M   NV+
Sbjct: 153 LRVYAISGSIKS---AHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVI 209

Query: 537 PWNTYTFPFL------------------------------LKACAEVLPDMEETKQIHCQ 626
            W +    F+                              L ACA  L  +E+ K IH  
Sbjct: 210 SWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAG-LGALEQGKWIHTY 268

Query: 627 IIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGISCRDAVSWNSMIDGYTKSGQIEMA 806
           I KN +  +     +L+ +Y K G+   A  VF  +  +   +W ++I G+   G+   A
Sbjct: 269 IGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEA 328

Query: 807 RELF 818
            + F
Sbjct: 329 LDWF 332


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score =  178 bits (452), Expect(2) = 2e-46
 Identities = 94/196 (47%), Positives = 128/196 (65%)
 Frame = +3

Query: 231 LLPHPANQVSLLDKSSCKKEIKQIHAHMIKTGLILDTFPASRLLATICQSFDIECLNYAH 410
           L P+     +LL++ S  KE+ QIH  ++K G I +    S LL +  +  ++  L Y  
Sbjct: 6   LPPNTEQTQALLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYAR-IELVNLAYTR 64

Query: 411 QVLERTENANTLMWNTMIRAYSCSDNPDEAILIYVQMLHNVVPWNTYTFPFLLKACAEVL 590
            V +   + NT++WNTM+RAYS S++P+ A+L+Y QMLHN VP N+YTFPFLLKAC+  L
Sbjct: 65  VVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACS-AL 123

Query: 591 PDMEETKQIHCQIIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGISCRDAVSWNSMI 770
              EET+QIH  IIK G   EVYA NSLL +YA SG+  SA  +F+ +  RD VSWN MI
Sbjct: 124 SAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMI 183

Query: 771 DGYTKSGQIEMARELF 818
           DGY K G ++MA ++F
Sbjct: 184 DGYIKFGNLDMAYKIF 199



 Score = 34.3 bits (77), Expect(2) = 2e-46
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 827 WTAIINGLALHGRATEALDLFKEMEGAGLKPNNITFTSLL 946
           WT +I G    G   EAL L ++M  AG+KP++IT +  L
Sbjct: 210 WTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSL 249



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = +2

Query: 827 WTAIINGLALHGRATEALDLFKEMEGAGLKPNNITFTSLL 946
           WTAII GLA+HG+  EALD F +M+ AG+ PN+ITFT++L
Sbjct: 311 WTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAIL 350


>ref|XP_002521565.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539243|gb|EEF40836.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 338

 Score =  173 bits (438), Expect(2) = 3e-46
 Identities = 97/189 (51%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
 Frame = +3

Query: 255 VSLLDKSSCKKEIKQIHAHMIKTGLILDTFPASRLLATICQSFDIECLNYAHQVLER-TE 431
           +SLL+K S   E+KQIHA M KTG +L+T   S L A    S +   L YA  V +  + 
Sbjct: 14  LSLLEKCSSMMELKQIHAQMFKTGSVLETITISELQA-FAASPNSGNLTYAKIVFDSLSS 72

Query: 432 NANTLMWNTMIRAYSCSDNPDEAILIYVQMLHNVVPWNTYTFPFLLKACAEVLPDMEETK 611
             NT +WN M+R Y+ S+ P+EA+++Y QML + VP N YTFPFLLKAC+  L  +E+ +
Sbjct: 73  RPNTYIWNAMLRGYADSNKPEEALILYHQMLCHSVPHNGYTFPFLLKACSS-LSAIEKAQ 131

Query: 612 QIHCQIIKNGLASEVYAANSLLHIYAKSGDSFSARQVFDGISCRDAVSWNSMIDGYTKSG 791
           Q+H QIIK G  S+VY  NSLLH YA SG   SAR +FD I   D VSWNS+IDGY K G
Sbjct: 132 QVHAQIIKLGFGSDVYTTNSLLHAYAASGFIESARIIFDRIPHPDTVSWNSIIDGYVKCG 191

Query: 792 QIEMARELF 818
           + E A ELF
Sbjct: 192 ETETAYELF 200



 Score = 39.3 bits (90), Expect(2) = 3e-46
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 827 WTAIINGLALHGRATEALDLFKEMEGAGLKPNNITFTSLL 946
           +T +I+G    G   EALDLF+EM+ AG+KP+ I  T++L
Sbjct: 211 FTVMISGHVQAGLDKEALDLFQEMQIAGIKPDKIVLTNVL 250