BLASTX nr result

ID: Dioscorea21_contig00022134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022134
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294335.1| photosystem II protein K [Dioscorea elephant...   129   2e-28
ref|YP_007475858.1| photosystem II protein K [Calamus caryotoide...   115   3e-24
ref|YP_007475772.1| photosystem II protein K [Pseudophoenix vini...   113   1e-23
gb|AEX95376.1| photosystem II protein K (chloroplast) [Triteleia...   113   1e-23
gb|AGE93439.1| photosystem II protein K [Xiphidium caeruleum]         113   2e-23

>ref|YP_001294335.1| photosystem II protein K [Dioscorea elephantipes]
           gi|148668029|gb|ABR01413.1| photosystem II protein K
           [Dioscorea elephantipes]
          Length = 63

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +1

Query: 13  MLNIFSLMCICLNSVFYSSMSGFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV 192
           MLNIFSLMCICLNSVFYSSMSGFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV
Sbjct: 1   MLNIFSLMCICLNSVFYSSMSGFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV 60

Query: 193 SFR 201
           SFR
Sbjct: 61  SFR 63


>ref|YP_007475858.1| photosystem II protein K [Calamus caryotoides]
           gi|449326340|gb|AGE92923.1| photosystem II protein K
           [Calamus caryotoides]
          Length = 61

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/63 (92%), Positives = 59/63 (93%)
 Frame = +1

Query: 13  MLNIFSLMCICLNSVFYSSMSGFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV 192
           MLNIFSL+CICLNSVFYSS   FFFAKLPEAYA FNPIVDVMPVIPVLFFLLAFVWQAAV
Sbjct: 1   MLNIFSLICICLNSVFYSS--SFFFAKLPEAYAFFNPIVDVMPVIPVLFFLLAFVWQAAV 58

Query: 193 SFR 201
           SFR
Sbjct: 59  SFR 61


>ref|YP_007475772.1| photosystem II protein K [Pseudophoenix vinifera]
           gi|456061753|ref|YP_007475944.1| photosystem II protein
           K [Bismarckia nobilis] gi|374962250|gb|AFA26784.1|
           photosystem II protein K, partial [Ravenea
           hildebrandtii] gi|449326253|gb|AGE92837.1| photosystem
           II protein K [Pseudophoenix vinifera]
           gi|449326427|gb|AGE93009.1| photosystem II protein K
           [Bismarckia nobilis]
          Length = 61

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/63 (90%), Positives = 58/63 (92%)
 Frame = +1

Query: 13  MLNIFSLMCICLNSVFYSSMSGFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV 192
           MLNIFSL+CICLNSVFYSS   FFFAKLPEAYA  NPIVDVMPVIPVLFFLLAFVWQAAV
Sbjct: 1   MLNIFSLICICLNSVFYSS--SFFFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAV 58

Query: 193 SFR 201
           SFR
Sbjct: 59  SFR 61


>gb|AEX95376.1| photosystem II protein K (chloroplast) [Triteleia hyacinthina]
          Length = 61

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/63 (90%), Positives = 58/63 (92%)
 Frame = +1

Query: 13  MLNIFSLMCICLNSVFYSSMSGFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV 192
           MLNIFSL+CICLNS  YSS   FFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV
Sbjct: 1   MLNIFSLICICLNSTLYSS--SFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV 58

Query: 193 SFR 201
           SFR
Sbjct: 59  SFR 61


>gb|AGE93439.1| photosystem II protein K [Xiphidium caeruleum]
          Length = 61

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/63 (88%), Positives = 59/63 (93%)
 Frame = +1

Query: 13  MLNIFSLMCICLNSVFYSSMSGFFFAKLPEAYALFNPIVDVMPVIPVLFFLLAFVWQAAV 192
           MLNIFSL+CICLNSV YS+   FFFAKLPEAYA+FNPIVDVMPVIPVLFFLLAFVWQAAV
Sbjct: 1   MLNIFSLICICLNSVLYSN--SFFFAKLPEAYAIFNPIVDVMPVIPVLFFLLAFVWQAAV 58

Query: 193 SFR 201
           SFR
Sbjct: 59  SFR 61


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