BLASTX nr result

ID: Dioscorea21_contig00022121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022121
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group] g...    73   3e-11
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi...    73   3e-11
ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [S...    70   1e-10
gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]         69   4e-10
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10

>ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
           gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza
           sativa Japonica Group] gi|125582364|gb|EAZ23295.1|
           hypothetical protein OsJ_06992 [Oryza sativa Japonica
           Group] gi|215696993|dbj|BAG90987.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/71 (47%), Positives = 52/71 (73%)
 Frame = +1

Query: 16  NNSLLPVKLFRYLYATGEEELLDEFVMASILKFCASRMDLETGKMIHSCILKQGMKTNPF 195
           + S+LP+++ +Y  +   +  LD+F++AS LK CAS +DL  G+M+H+C+LK  +  +PF
Sbjct: 361 SRSMLPLRMLKYYLSV--QGKLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPF 418

Query: 196 VSSSLVDMYAK 228
           V SSLVDMYAK
Sbjct: 419 VISSLVDMYAK 429


>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/71 (47%), Positives = 52/71 (73%)
 Frame = +1

Query: 16  NNSLLPVKLFRYLYATGEEELLDEFVMASILKFCASRMDLETGKMIHSCILKQGMKTNPF 195
           + S+LP+++ +Y  +   +  LD+F++AS LK CAS +DL  G+M+H+C+LK  +  +PF
Sbjct: 361 SRSMLPLRMLKYYLSV--QGKLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPF 418

Query: 196 VSSSLVDMYAK 228
           V SSLVDMYAK
Sbjct: 419 VISSLVDMYAK 429


>ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
           gi|241933759|gb|EES06904.1| hypothetical protein
           SORBIDRAFT_04g021580 [Sorghum bicolor]
          Length = 798

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/68 (51%), Positives = 51/68 (75%)
 Frame = +1

Query: 25  LLPVKLFRYLYATGEEELLDEFVMASILKFCASRMDLETGKMIHSCILKQGMKTNPFVSS 204
           + P+++ +Y Y T + +L D+F++AS LK CAS +DL  G+M+H+CILK  M  + FV+S
Sbjct: 376 VFPLRMLKY-YLTVQGKL-DQFIVASSLKSCASGLDLVAGRMLHACILKSNMNPDSFVTS 433

Query: 205 SLVDMYAK 228
           SLVDMYAK
Sbjct: 434 SLVDMYAK 441


>gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]
          Length = 798

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/68 (50%), Positives = 52/68 (76%)
 Frame = +1

Query: 25  LLPVKLFRYLYATGEEELLDEFVMASILKFCASRMDLETGKMIHSCILKQGMKTNPFVSS 204
           ++P+++ +Y Y T + +L D+F++AS LK CAS +DL  G+M+H+CILK  M  + FV+S
Sbjct: 377 VIPLRMLKY-YLTIQGKL-DQFIVASSLKSCASGLDLLAGRMLHACILKSDMNPDSFVTS 434

Query: 205 SLVDMYAK 228
           SL+DMYAK
Sbjct: 435 SLLDMYAK 442


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   IECNDNNSL-----LPVKLFRYLYATGEEELLDEFVMASILKFCASRMDLETGKMIHSCI 165
           I C D+ SL     +P+KL  YL   G     DEF+M S+LK+C+    LE+GKM HS I
Sbjct: 310 IGCIDHESLYPRVEVPLKLLNYLEGGG----YDEFIMTSLLKWCSLESSLESGKMFHSLI 365

Query: 166 LKQGMKTNPFVSSSLVDMYAK 228
           +K  +K++ +V SSL+DMY+K
Sbjct: 366 IKLDLKSDSYVLSSLIDMYSK 386


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