BLASTX nr result
ID: Dioscorea21_contig00022111
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00022111 (483 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max] 161 4e-38 ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|... 161 6e-38 ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2... 159 2e-37 ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max] 159 3e-37 dbj|BAJ99316.1| predicted protein [Hordeum vulgare subsp. vulgare] 157 8e-37 >ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max] Length = 392 Score = 161 bits (408), Expect = 4e-38 Identities = 88/161 (54%), Positives = 107/161 (66%) Frame = +1 Query: 1 PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180 P +SLN LS DSWD DR LPFLTENTDFT KSTI+NELYGF++SSPG Sbjct: 45 PSVASLNLLS-DSWDFHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPG 103 Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360 PF +QS+E++AMARHC+ G+E R+S ER+IL+D+ Sbjct: 104 MLP-----------------------PFAIQSEETRAMARHCSTGIEPRISTERIILLDT 140 Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483 QPVFS SVL +MM+PDG STI VL+GE+L A+LAHELIGIQ Sbjct: 141 QPVFSASVLAEMMRPDGSSTISVLSGETLSAELAHELIGIQ 181 >ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|297737327|emb|CBI26528.3| unnamed protein product [Vitis vinifera] Length = 419 Score = 161 bits (407), Expect = 6e-38 Identities = 88/161 (54%), Positives = 106/161 (65%) Frame = +1 Query: 1 PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180 P SLN LS DSW+ DR LPFLT+NTDFT KSTI+NELYGF+ SSPG Sbjct: 63 PPIGSLNLLS-DSWEFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPG 121 Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360 PF +QS++ +AMARHCT+G+E R+SAERLIL+D+ Sbjct: 122 MLP-----------------------PFAIQSEDIRAMARHCTVGIEPRISAERLILLDT 158 Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483 QPVFSPSVL +MM+PDG STI VL GESL ++LAHEL+GIQ Sbjct: 159 QPVFSPSVLAEMMRPDGSSTISVLGGESLSSELAHELMGIQ 199 >ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1| predicted protein [Populus trichocarpa] Length = 408 Score = 159 bits (402), Expect = 2e-37 Identities = 88/161 (54%), Positives = 106/161 (65%) Frame = +1 Query: 1 PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180 P +SLN LS DSWD DR LPFLTENTDFT KSTILNELYGF+ +SPG Sbjct: 53 PSITSLNLLS-DSWDFHIDRFLPFLTENTDFTVVGIIGPPGVGKSTILNELYGFDGTSPG 111 Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360 PF VQS++++AMARHC++G+E R+SAERLIL+D+ Sbjct: 112 MLP-----------------------PFTVQSEDNRAMARHCSVGIEPRISAERLILLDT 148 Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483 QPVFSPSVL +MM+PDG STI VL+GE+L +LAHEL IQ Sbjct: 149 QPVFSPSVLAEMMRPDGSSTISVLSGENLSTELAHELTAIQ 189 >ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max] Length = 393 Score = 159 bits (401), Expect = 3e-37 Identities = 85/161 (52%), Positives = 107/161 (66%) Frame = +1 Query: 1 PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180 P +SLN LS DSWD DR LPFLTENTDFT KSTI+NE+YGF+++SPG Sbjct: 45 PSAASLNLLS-DSWDFRIDRFLPFLTENTDFTVIGVIGSPGVGKSTIMNEIYGFDSTSPG 103 Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360 PF +QS+E++AMARHC+ G+E R+S ER+IL+D+ Sbjct: 104 MLP-----------------------PFAIQSEETRAMARHCSTGIEPRISTERIILLDT 140 Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483 QPVFS SVL +MM+PDG STI VL+GE+L A+LAHEL+GIQ Sbjct: 141 QPVFSASVLSEMMRPDGSSTISVLSGETLSAELAHELLGIQ 181 >dbj|BAJ99316.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 410 Score = 157 bits (397), Expect = 8e-37 Identities = 78/161 (48%), Positives = 107/161 (66%) Frame = +1 Query: 1 PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180 P P SL+ +S D+W++ D++LP+LTEN DF KSTI+NELYG++ SSPG Sbjct: 62 PQPGSLSLVS-DAWEVHTDKILPYLTENNDFMVIGIIGPPGVGKSTIMNELYGYDGSSPG 120 Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360 PF Q++E KA+A+HCT G++ R+S ER+IL+D+ Sbjct: 121 MHP-----------------------PFATQTEEIKALAKHCTAGVDFRISHERVILLDT 157 Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483 QPV+SPS+L+DMM+PDG S++PVLNG+ LPADLAHEL+GIQ Sbjct: 158 QPVYSPSILIDMMRPDGSSSLPVLNGDPLPADLAHELMGIQ 198