BLASTX nr result

ID: Dioscorea21_contig00022111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022111
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        161   4e-38
ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   161   6e-38
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]        159   3e-37
dbj|BAJ99316.1| predicted protein [Hordeum vulgare subsp. vulgare]    157   8e-37

>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  161 bits (408), Expect = 4e-38
 Identities = 88/161 (54%), Positives = 107/161 (66%)
 Frame = +1

Query: 1   PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180
           P  +SLN LS DSWD   DR LPFLTENTDFT           KSTI+NELYGF++SSPG
Sbjct: 45  PSVASLNLLS-DSWDFHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPG 103

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360
                                     PF +QS+E++AMARHC+ G+E R+S ER+IL+D+
Sbjct: 104 MLP-----------------------PFAIQSEETRAMARHCSTGIEPRISTERIILLDT 140

Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483
           QPVFS SVL +MM+PDG STI VL+GE+L A+LAHELIGIQ
Sbjct: 141 QPVFSASVLAEMMRPDGSSTISVLSGETLSAELAHELIGIQ 181


>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  161 bits (407), Expect = 6e-38
 Identities = 88/161 (54%), Positives = 106/161 (65%)
 Frame = +1

Query: 1   PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180
           P   SLN LS DSW+   DR LPFLT+NTDFT           KSTI+NELYGF+ SSPG
Sbjct: 63  PPIGSLNLLS-DSWEFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPG 121

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360
                                     PF +QS++ +AMARHCT+G+E R+SAERLIL+D+
Sbjct: 122 MLP-----------------------PFAIQSEDIRAMARHCTVGIEPRISAERLILLDT 158

Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483
           QPVFSPSVL +MM+PDG STI VL GESL ++LAHEL+GIQ
Sbjct: 159 QPVFSPSVLAEMMRPDGSSTISVLGGESLSSELAHELMGIQ 199


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  159 bits (402), Expect = 2e-37
 Identities = 88/161 (54%), Positives = 106/161 (65%)
 Frame = +1

Query: 1   PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180
           P  +SLN LS DSWD   DR LPFLTENTDFT           KSTILNELYGF+ +SPG
Sbjct: 53  PSITSLNLLS-DSWDFHIDRFLPFLTENTDFTVVGIIGPPGVGKSTILNELYGFDGTSPG 111

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360
                                     PF VQS++++AMARHC++G+E R+SAERLIL+D+
Sbjct: 112 MLP-----------------------PFTVQSEDNRAMARHCSVGIEPRISAERLILLDT 148

Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483
           QPVFSPSVL +MM+PDG STI VL+GE+L  +LAHEL  IQ
Sbjct: 149 QPVFSPSVLAEMMRPDGSSTISVLSGENLSTELAHELTAIQ 189


>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 393

 Score =  159 bits (401), Expect = 3e-37
 Identities = 85/161 (52%), Positives = 107/161 (66%)
 Frame = +1

Query: 1   PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180
           P  +SLN LS DSWD   DR LPFLTENTDFT           KSTI+NE+YGF+++SPG
Sbjct: 45  PSAASLNLLS-DSWDFRIDRFLPFLTENTDFTVIGVIGSPGVGKSTIMNEIYGFDSTSPG 103

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360
                                     PF +QS+E++AMARHC+ G+E R+S ER+IL+D+
Sbjct: 104 MLP-----------------------PFAIQSEETRAMARHCSTGIEPRISTERIILLDT 140

Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483
           QPVFS SVL +MM+PDG STI VL+GE+L A+LAHEL+GIQ
Sbjct: 141 QPVFSASVLSEMMRPDGSSTISVLSGETLSAELAHELLGIQ 181


>dbj|BAJ99316.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 410

 Score =  157 bits (397), Expect = 8e-37
 Identities = 78/161 (48%), Positives = 107/161 (66%)
 Frame = +1

Query: 1   PYPSSLNFLSADSWDLLPDRVLPFLTENTDFTXXXXXXXXXXXKSTILNELYGFETSSPG 180
           P P SL+ +S D+W++  D++LP+LTEN DF            KSTI+NELYG++ SSPG
Sbjct: 62  PQPGSLSLVS-DAWEVHTDKILPYLTENNDFMVIGIIGPPGVGKSTIMNELYGYDGSSPG 120

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPFVVQSDESKAMARHCTMGMELRVSAERLILIDS 360
                                     PF  Q++E KA+A+HCT G++ R+S ER+IL+D+
Sbjct: 121 MHP-----------------------PFATQTEEIKALAKHCTAGVDFRISHERVILLDT 157

Query: 361 QPVFSPSVLVDMMKPDGLSTIPVLNGESLPADLAHELIGIQ 483
           QPV+SPS+L+DMM+PDG S++PVLNG+ LPADLAHEL+GIQ
Sbjct: 158 QPVYSPSILIDMMRPDGSSSLPVLNGDPLPADLAHELMGIQ 198


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