BLASTX nr result

ID: Dioscorea21_contig00022067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022067
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japo...    62   4e-08
ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group] g...    62   4e-08
ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795...    62   5e-08
ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799...    59   4e-07
ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846...    59   5e-07

>gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
          Length = 481

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = +3

Query: 114 GSSSVYGDPTWRSGSNDLDGDAPFGYGLGSAAPVVTAK 227
           G  S+YGD TWRSGS++LDG +PFGYGLG+AA  VTAK
Sbjct: 436 GGGSIYGDTTWRSGSSELDGTSPFGYGLGNAASDVTAK 473


>ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
           gi|108864610|gb|ABA94921.2| RNA-binding protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa
           Japonica Group] gi|215697828|dbj|BAG92021.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740693|dbj|BAG97349.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 467

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = +3

Query: 114 GSSSVYGDPTWRSGSNDLDGDAPFGYGLGSAAPVVTAK 227
           G  S+YGD TWRSGS++LDG +PFGYGLG+AA  VTAK
Sbjct: 422 GGGSIYGDTTWRSGSSELDGTSPFGYGLGNAASDVTAK 459


>ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
          Length = 479

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = +3

Query: 78  SNSLNGENTGIYGSSSVYGDPTWRSGSNDLDGDAPFGYGLGSAAPVVTAK 227
           +  ++G     Y +SSVYGDPTWRS +++ DG  PFGYGLG AA  V+AK
Sbjct: 408 NGGVDGAFADFYNNSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSAK 457


>ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
          Length = 475

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/50 (50%), Positives = 33/50 (66%)
 Frame = +3

Query: 78  SNSLNGENTGIYGSSSVYGDPTWRSGSNDLDGDAPFGYGLGSAAPVVTAK 227
           +  ++G     Y +SSVYGDPTWRS +++ DG  PFGYG G  A  V+AK
Sbjct: 404 NGGVDGAFADFYNNSSVYGDPTWRSSNSERDGSGPFGYGFGGVASDVSAK 453


>ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
           distachyon]
          Length = 463

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +3

Query: 93  GENTGIYGSSSVYGDPTWRSGSNDLDGDAPFGYGLGSAAPVVTAK 227
           G+++G  G  S+YGD TWRSGS +LDG +PFGYGLG+AA  VTAK
Sbjct: 413 GDSSGA-GGGSIYGDTTWRSGS-ELDGTSPFGYGLGNAASDVTAK 455


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