BLASTX nr result

ID: Dioscorea21_contig00022065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022065
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588656.1| Pentatricopeptide repeat-containing protein ...    86   2e-15
ref|XP_003588655.1| Pentatricopeptide repeat-containing protein ...    86   2e-15
ref|XP_003545545.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
emb|CBI20759.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14

>ref|XP_003588656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477704|gb|AES58907.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 627

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/63 (65%), Positives = 52/63 (82%)
 Frame = +1

Query: 40  KEEAQKANNNEFFPDVVTYTTLLKGLGSKKDLCTVQEIAIEMKSLPNLYIDRTAYTAIVD 219
           KE+AQ+  +++ FPD+VTYTTLLKGLG  KDL +V +I +EMKS   LYIDRTAYTAIVD
Sbjct: 237 KEKAQEFIHDDLFPDIVTYTTLLKGLGQAKDLVSVMQIVLEMKSCSQLYIDRTAYTAIVD 296

Query: 220 AMV 228
           A++
Sbjct: 297 ALL 299


>ref|XP_003588655.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477703|gb|AES58906.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 639

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/63 (65%), Positives = 52/63 (82%)
 Frame = +1

Query: 40  KEEAQKANNNEFFPDVVTYTTLLKGLGSKKDLCTVQEIAIEMKSLPNLYIDRTAYTAIVD 219
           KE+AQ+  +++ FPD+VTYTTLLKGLG  KDL +V +I +EMKS   LYIDRTAYTAIVD
Sbjct: 249 KEKAQEFIHDDLFPDIVTYTTLLKGLGQAKDLVSVMQIVLEMKSCSQLYIDRTAYTAIVD 308

Query: 220 AMV 228
           A++
Sbjct: 309 ALL 311


>ref|XP_003545545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g10690-like [Glycine max]
          Length = 590

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +1

Query: 40  KEEAQKANNNEFFPDVVTYTTLLKGLGSKKDLCTVQEIAIEMKSLPNLYIDRTAYTAIVD 219
           K +AQK +N++ FPD+VTYTT+LKG G  KDL TV +I +EMKS   LYIDRTAYTAI+D
Sbjct: 257 KGKAQKFSNHDLFPDIVTYTTMLKGFGQTKDLATVLKIVLEMKSHRELYIDRTAYTAIID 316

Query: 220 AMV 228
           A +
Sbjct: 317 AFL 319


>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +1

Query: 40  KEEAQKANNNEFFPDVVTYTTLLKGLGSKKDLCTVQEIAIEMKSLPNLYIDRTAYTAIVD 219
           KE AQK  + + FPD +TYTTLLKG G  KDL +VQ+I +EMKS  NL++DRTAYTAIVD
Sbjct: 279 KENAQKTIDVDLFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVD 338

Query: 220 AMV 228
           A++
Sbjct: 339 ALL 341


>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g10690-like [Vitis vinifera]
          Length = 609

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +1

Query: 40  KEEAQKANNNEFFPDVVTYTTLLKGLGSKKDLCTVQEIAIEMKSLPNLYIDRTAYTAIVD 219
           KE AQK  + + FPD +TYTTLLKG G  KDL +VQ+I +EMKS  NL++DRTAYTAIVD
Sbjct: 262 KENAQKTIDVDLFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVD 321

Query: 220 AMV 228
           A++
Sbjct: 322 ALL 324


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