BLASTX nr result

ID: Dioscorea21_contig00022062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022062
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   421   e-115
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6...   412   e-113
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...   411   e-112
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   407   e-111
ref|XP_003576935.1| PREDICTED: structural maintenance of chromos...   402   e-110

>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  421 bits (1083), Expect = e-115
 Identities = 211/319 (66%), Positives = 256/319 (80%)
 Frame = +1

Query: 19  RSGAGIISRIRLENFMCHGSLTIELGDWVNFITGQNGSGKSAILTALCVAFGCRAKGTQR 198
           RS AGII +IRLENFMCH SL IELG+W+NF+TGQNGSGKSAILTALCVAFG RAK TQR
Sbjct: 16  RSSAGIILKIRLENFMCHSSLQIELGEWLNFVTGQNGSGKSAILTALCVAFGSRAKETQR 75

Query: 199 ASSLKDFIKNGCNYAAIFVEIKNQGEEAFKHETYGDLIILERRITESTSATILKDYQGRK 378
           A++LK+FIK GC+YA I VEIKN+GE+AFK E YGD+II+ERRI+ STS+T+LKD+QG++
Sbjct: 76  ATTLKEFIKTGCSYAVIQVEIKNEGEDAFKPEIYGDVIIVERRISVSTSSTVLKDHQGKR 135

Query: 379 VATRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNXXXXXXXXXXATLLQNVNELL 558
           VA+R+++L ELVEHFNIDVENPCVIMSQDKSREFLHSGN          ATLLQ VN+LL
Sbjct: 136 VASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLL 195

Query: 559 LSIRVQLDAASAILDELVSLIRPIENELKDLQDKIKNMEHVEEIAHEVQNLKKKLAWSWV 738
           ++I  +LD+A+ +++EL   I PI  EL +LQ KI+NMEHVEEI+ +VQ LKKKLAWSWV
Sbjct: 196 VNIGTRLDSANTLVEELEKSIEPILKELNELQVKIRNMEHVEEISQQVQQLKKKLAWSWV 255

Query: 739 FDVDRQIQEQNVKLEKLKERVPTCQERIDKYXXXXXXXXXXXXXXXXXXXSMTEKTSEVR 918
           +DVDRQ+QEQ+ K+EKLK+R+PTCQ RID+                     M EKT+EVR
Sbjct: 256 YDVDRQLQEQSAKIEKLKDRIPTCQARIDRQLGKMEELRECLTKKKTQIACMMEKTTEVR 315

Query: 919 RGKEELQQKLSLATKESLE 975
           R KE+LQQ+LSLATKE LE
Sbjct: 316 RMKEDLQQRLSLATKERLE 334


>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
           communis] gi|223550086|gb|EEF51573.1| structural
           maintenance of chromosomes 6 smc6, putative [Ricinus
           communis]
          Length = 1058

 Score =  412 bits (1060), Expect = e-113
 Identities = 205/320 (64%), Positives = 251/320 (78%)
 Frame = +1

Query: 16  ARSGAGIISRIRLENFMCHGSLTIELGDWVNFITGQNGSGKSAILTALCVAFGCRAKGTQ 195
           +RSGAG ++RIRLENFMCH +L IEL  WVNFITGQNGSGKSAILTALC+AFG RAKGTQ
Sbjct: 15  SRSGAGTVTRIRLENFMCHSNLQIELCPWVNFITGQNGSGKSAILTALCIAFGSRAKGTQ 74

Query: 196 RASSLKDFIKNGCNYAAIFVEIKNQGEEAFKHETYGDLIILERRITESTSATILKDYQGR 375
           RAS+LKDFIK GC+YA + VE+KN+G+EAFK E YGD II+ERRI +STS+T+LKD+QG+
Sbjct: 75  RASTLKDFIKTGCSYAVVEVEVKNEGDEAFKPEIYGDAIIIERRINQSTSSTVLKDFQGK 134

Query: 376 KVATRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNXXXXXXXXXXATLLQNVNEL 555
           KVA+R++ELREL+EHFNIDVENPCVIMSQDKSREFLHSGN          ATLLQ VN+L
Sbjct: 135 KVASRKEELRELIEHFNIDVENPCVIMSQDKSREFLHSGNDRDKFKFFFKATLLQQVNDL 194

Query: 556 LLSIRVQLDAASAILDELVSLIRPIENELKDLQDKIKNMEHVEEIAHEVQNLKKKLAWSW 735
           L SI  QL + +A +DEL + I+PIE EL +LQ KIKNMEH+EEI+ +VQ LKKKLAWSW
Sbjct: 195 LQSIYEQLKSTNAFVDELEATIKPIEKELAELQVKIKNMEHIEEISQQVQQLKKKLAWSW 254

Query: 736 VFDVDRQIQEQNVKLEKLKERVPTCQERIDKYXXXXXXXXXXXXXXXXXXXSMTEKTSEV 915
           V+DVD+QI+ Q VK+ +LK+R+PTCQ RID+                    +M +  SEV
Sbjct: 255 VYDVDKQIEGQRVKIGQLKDRIPTCQARIDRNLVKVDSLRDLLAKKKAKIANMMQTASEV 314

Query: 916 RRGKEELQQKLSLATKESLE 975
           R  +++LQ  +SLATK+ LE
Sbjct: 315 REKQDQLQHLVSLATKQKLE 334


>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cucumis sativus]
          Length = 1052

 Score =  411 bits (1057), Expect = e-112
 Identities = 206/323 (63%), Positives = 252/323 (78%)
 Frame = +1

Query: 4   RGNPARSGAGIISRIRLENFMCHGSLTIELGDWVNFITGQNGSGKSAILTALCVAFGCRA 183
           R  P RSGAGI+  IRLENFMCH +L I+ G+W+NFITGQNGSGKSAILTALCVAFGCRA
Sbjct: 5   RALPHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTALCVAFGCRA 64

Query: 184 KGTQRASSLKDFIKNGCNYAAIFVEIKNQGEEAFKHETYGDLIILERRITESTSATILKD 363
           KGTQRA++LKDFIK GC++A I V ++N GE+AFKH  YGD+II+ERRI+ESTSA +LKD
Sbjct: 65  KGTQRAATLKDFIKTGCSHAVIHVVLQNNGEDAFKHGIYGDVIIIERRISESTSAIVLKD 124

Query: 364 YQGRKVATRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNXXXXXXXXXXATLLQN 543
            QG+KVA+RRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGN          ATLLQ 
Sbjct: 125 CQGKKVASRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQ 184

Query: 544 VNELLLSIRVQLDAASAILDELVSLIRPIENELKDLQDKIKNMEHVEEIAHEVQNLKKKL 723
           V++LL +I   L +A+A++D+L S IRP+E EL +L+ KIKNME VEEI+ +VQ LKKKL
Sbjct: 185 VDDLLKNIFDNLRSANALVDDLESTIRPVEKELNELRGKIKNMEQVEEISQQVQQLKKKL 244

Query: 724 AWSWVFDVDRQIQEQNVKLEKLKERVPTCQERIDKYXXXXXXXXXXXXXXXXXXXSMTEK 903
           AWSWV+DVD+Q+QEQ+ K+ KL++R+P C+ +ID                     SM E+
Sbjct: 245 AWSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLVEKLRDRYIEKKTQIASMMER 304

Query: 904 TSEVRRGKEELQQKLSLATKESL 972
           TSEVRR K+ELQ+ L+ AT+E L
Sbjct: 305 TSEVRRMKDELQETLTSATREKL 327


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  407 bits (1047), Expect = e-111
 Identities = 205/323 (63%), Positives = 250/323 (77%)
 Frame = +1

Query: 4   RGNPARSGAGIISRIRLENFMCHGSLTIELGDWVNFITGQNGSGKSAILTALCVAFGCRA 183
           R  P RSGAGI+  IRLENFMCH +L I+ G+W+NFITGQNGSGKSAILTALCVAFGCRA
Sbjct: 5   RALPHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTALCVAFGCRA 64

Query: 184 KGTQRASSLKDFIKNGCNYAAIFVEIKNQGEEAFKHETYGDLIILERRITESTSATILKD 363
           KGTQRA++LKDFIK GC++A I V ++N GE+AFKH  YGD+II+ERRI+ESTSA +LKD
Sbjct: 65  KGTQRAATLKDFIKTGCSHAVIHVVLQNNGEDAFKHGIYGDVIIIERRISESTSAIVLKD 124

Query: 364 YQGRKVATRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNXXXXXXXXXXATLLQN 543
            QG+KVA+RRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGN          ATLLQ 
Sbjct: 125 CQGKKVASRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQ 184

Query: 544 VNELLLSIRVQLDAASAILDELVSLIRPIENELKDLQDKIKNMEHVEEIAHEVQNLKKKL 723
           V++LL +I   L +A+A++D+L S IRP+E EL +L  K KNME VEEI+ +VQ LKKKL
Sbjct: 185 VDDLLKNIFDNLRSANALVDDLESTIRPVEKELNELXRKNKNMEQVEEISQQVQQLKKKL 244

Query: 724 AWSWVFDVDRQIQEQNVKLEKLKERVPTCQERIDKYXXXXXXXXXXXXXXXXXXXSMTEK 903
           AWSWV+DVD+Q+QEQ+ K+ KL++R+P C+ +ID                     SM E+
Sbjct: 245 AWSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLVEKLRDRYIEKKTQIASMMER 304

Query: 904 TSEVRRGKEELQQKLSLATKESL 972
           TSEVRR K+ELQ+ L+ AT+E L
Sbjct: 305 TSEVRRMKDELQETLTSATREKL 327


>ref|XP_003576935.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Brachypodium distachyon]
          Length = 1039

 Score =  402 bits (1032), Expect = e-110
 Identities = 201/316 (63%), Positives = 243/316 (76%)
 Frame = +1

Query: 28  AGIISRIRLENFMCHGSLTIELGDWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASS 207
           AG ISRIRLENFMCH SL IELGD VNFITGQNGSGKSAILTALC+AFGCRAK TQRA++
Sbjct: 2   AGTISRIRLENFMCHSSLHIELGDHVNFITGQNGSGKSAILTALCIAFGCRAKSTQRAAT 61

Query: 208 LKDFIKNGCNYAAIFVEIKNQGEEAFKHETYGDLIILERRITESTSATILKDYQGRKVAT 387
           LKDFIK GC+YAAI V+I NQGE+AFK E YG+LIILERRIT+S+S+TILKD  GRKVA 
Sbjct: 62  LKDFIKTGCSYAAIVVDINNQGEDAFKPEVYGNLIILERRITDSSSSTILKDQHGRKVAH 121

Query: 388 RRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNXXXXXXXXXXATLLQNVNELLLSI 567
           R+D+L E++EHFNIDVENPCVIMSQDKSREFLHSGN          ATLLQ VNELL +I
Sbjct: 122 RKDDLTEIIEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNELLETI 181

Query: 568 RVQLDAASAILDELVSLIRPIENELKDLQDKIKNMEHVEEIAHEVQNLKKKLAWSWVFDV 747
           + QL+ A +I++EL   I+P+  EL +L+ KIKNMEH+EEI+H++ NLKKKLAWSWV+DV
Sbjct: 182 KDQLNNADSIVEELEKSIKPVMRELDELRQKIKNMEHIEEISHDIDNLKKKLAWSWVYDV 241

Query: 748 DRQIQEQNVKLEKLKERVPTCQERIDKYXXXXXXXXXXXXXXXXXXXSMTEKTSEVRRGK 927
           D+QI EQ VKL+KLKER+P CQERID+                    S+ +KT EV   +
Sbjct: 242 DKQIGEQTVKLQKLKERIPACQERIDRNTVLLDELKKELIEKEENVRSLAKKTREVHMMR 301

Query: 928 EELQQKLSLATKESLE 975
           + +   ++   K+ +E
Sbjct: 302 KNMDDSITEVVKQKVE 317


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