BLASTX nr result

ID: Dioscorea21_contig00022060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022060
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317562.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002866054.1| hypothetical protein ARALYDRAFT_495546 [Arab...    55   8e-06

>ref|XP_002317562.1| predicted protein [Populus trichocarpa] gi|222860627|gb|EEE98174.1|
           predicted protein [Populus trichocarpa]
          Length = 983

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -2

Query: 226 SGASHRDDRPLLALSLSDFS-GSSQKSYGFGGSINGNKLGPLSFKTSSNQSGRILSFNGS 50
           SGA   D+RPLL++SLSD+S GS+ K++G G SI   KLG  S    SN   R  SF  +
Sbjct: 273 SGAGRNDERPLLSISLSDYSVGSTHKTFGLGNSIKEEKLGHQSLGNISNHEKRGSSFESN 332

Query: 49  LGETPAPGVVL 17
              + A  V L
Sbjct: 333 FYNSDAQNVSL 343


>ref|XP_002866054.1| hypothetical protein ARALYDRAFT_495546 [Arabidopsis lyrata subsp.
           lyrata] gi|297311889|gb|EFH42313.1| hypothetical protein
           ARALYDRAFT_495546 [Arabidopsis lyrata subsp. lyrata]
          Length = 902

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = -2

Query: 232 SSSGASHRDDRPLLALSLSDFSGSSQKSYGFGGSINGNKLGPLSFKTSSNQSGRILSFNG 53
           + SG    D+RPLL+LS SD+S  S  S  +GGS+ G+KLG  SF   SNQ G++ SF+G
Sbjct: 244 NGSGGRKNDERPLLSLSSSDYSVGS--SINYGGSVKGDKLGHQSFNIYSNQ-GKMSSFDG 300

Query: 52  S 50
           S
Sbjct: 301 S 301


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