BLASTX nr result

ID: Dioscorea21_contig00022038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022038
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275645.2| PREDICTED: two-component response regulator-...   139   3e-31
emb|CBI25329.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002311124.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002311123.1| pseudo response regulator [Populus trichocar...   137   1e-30
ref|XP_002316333.1| pseudo response regulator [Populus trichocar...   135   3e-30

>ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
           vinifera]
          Length = 747

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/104 (70%), Positives = 83/104 (79%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   SGIQTQKSAK-KCVGDSDNHTGSNDEDDNGSIGLNARDGSDNGSGTQNSWTKCAVEVDSP 179
           SGI+T+KSAK K V  SDN+TGSNDED NGSIGLN RDGSDNGSGTQ+SWTK AVEVDSP
Sbjct: 206 SGIRTKKSAKSKSVAGSDNNTGSNDED-NGSIGLNVRDGSDNGSGTQSSWTKMAVEVDSP 264

Query: 180 QPMSPSDQLADPHDSTCAQVIHPKPESFCNGWVPFPTTKDGRQQ 311
           +PM P DQ ADP DSTCAQV    PE+F N  VP  ++KD ++Q
Sbjct: 265 KPMQPWDQSADPPDSTCAQVTQSWPEAFGNYQVPMTSSKDYQEQ 308


>emb|CBI25329.3| unnamed protein product [Vitis vinifera]
          Length = 769

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/104 (70%), Positives = 83/104 (79%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   SGIQTQKSAK-KCVGDSDNHTGSNDEDDNGSIGLNARDGSDNGSGTQNSWTKCAVEVDSP 179
           SGI+T+KSAK K V  SDN+TGSNDED NGSIGLN RDGSDNGSGTQ+SWTK AVEVDSP
Sbjct: 228 SGIRTKKSAKSKSVAGSDNNTGSNDED-NGSIGLNVRDGSDNGSGTQSSWTKMAVEVDSP 286

Query: 180 QPMSPSDQLADPHDSTCAQVIHPKPESFCNGWVPFPTTKDGRQQ 311
           +PM P DQ ADP DSTCAQV    PE+F N  VP  ++KD ++Q
Sbjct: 287 KPMQPWDQSADPPDSTCAQVTQSWPEAFGNYQVPMTSSKDYQEQ 330


>ref|XP_002311124.1| predicted protein [Populus trichocarpa] gi|222850944|gb|EEE88491.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/112 (64%), Positives = 84/112 (75%), Gaps = 4/112 (3%)
 Frame = +3

Query: 3   SGIQTQKSAKKCVGD-SDNHTGSNDEDDNGSIGLNARDGSDNGSGTQNSWTKCAVEVDSP 179
           S ++TQKS K    D SDN TGSND+D  GS+GLNARDGSDNGSGTQ+SWTK AVEV+SP
Sbjct: 169 SAVRTQKSTKSNGADESDNDTGSNDDDGIGSVGLNARDGSDNGSGTQSSWTKRAVEVESP 228

Query: 180 QPMSPSDQ--LADPHDSTCAQVIHPKPESFCNGWVPFPTTKD-GRQQKQLSD 326
           +PMSP DQ  L+DP DSTCAQVIH +PE+  N WVP  T K  G Q  +L +
Sbjct: 229 KPMSPWDQDHLSDPPDSTCAQVIHSRPEACDNSWVPLATMKKCGEQDDELDN 280


>ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
           gi|222850943|gb|EEE88490.1| pseudo response regulator
           [Populus trichocarpa]
          Length = 766

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/112 (64%), Positives = 84/112 (75%), Gaps = 4/112 (3%)
 Frame = +3

Query: 3   SGIQTQKSAKKCVGD-SDNHTGSNDEDDNGSIGLNARDGSDNGSGTQNSWTKCAVEVDSP 179
           S ++TQKS K    D SDN TGSND+D  GS+GLNARDGSDNGSGTQ+SWTK AVEV+SP
Sbjct: 224 SAVRTQKSTKSNGADESDNDTGSNDDDGIGSVGLNARDGSDNGSGTQSSWTKRAVEVESP 283

Query: 180 QPMSPSDQ--LADPHDSTCAQVIHPKPESFCNGWVPFPTTKD-GRQQKQLSD 326
           +PMSP DQ  L+DP DSTCAQVIH +PE+  N WVP  T K  G Q  +L +
Sbjct: 284 KPMSPWDQDHLSDPPDSTCAQVIHSRPEACDNSWVPLATMKKCGEQDDELDN 335


>ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
           gi|222865373|gb|EEF02504.1| pseudo response regulator
           [Populus trichocarpa]
          Length = 763

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/110 (65%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
 Frame = +3

Query: 3   SGIQTQKSAK-KCVGDSDNHTGSNDEDDNGSIGLNARDGSDNGSGTQNSWTKCAVEVDSP 179
           S ++ QKS K K   +SDN T SND+DD GSIGLNARDGSDNGSGTQ+SWTK AVEVDSP
Sbjct: 221 SAVRIQKSLKSKGADESDNDTDSNDDDDIGSIGLNARDGSDNGSGTQSSWTKRAVEVDSP 280

Query: 180 QPMSPSDQLADPHDSTCAQVIHPKPESFCNGWVPFPTTKD-GRQQKQLSD 326
           +PM P DQLADP DST AQVIH + E+ C+ WVP  TTK  G+Q  +L +
Sbjct: 281 KPMLPWDQLADPPDSTFAQVIHSRSEA-CDNWVPLATTKKFGKQDDELDN 329


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