BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022034
         (1490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   439   e-123
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   429   e-119
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   428   e-119
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...   426   e-118
ref|XP_002880355.1| pentatricopeptide repeat-containing protein ...   416   e-113

>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
            [Vitis vinifera]
          Length = 612

 Score =  439 bits (1129), Expect(2) = e-123
 Identities = 214/380 (56%), Positives = 283/380 (74%), Gaps = 1/380 (0%)
 Frame = -1

Query: 1466 NAHTFSGLLTACVRLEELCLVRQVHGQVFLVGFLSNLIVSSAIVDAYSKCGCVSDAKRLF 1287
            N  +F+G+LT CV+L+E+ L RQVHGQ+ + GFLSN+++SS+++DAY KCG + DA++LF
Sbjct: 191  NGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLF 250

Query: 1286 DEMKVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQNGYSYKALD 1107
            DEM  +DVLAWTT+V G+AK GD+ +A++LF EM E+N VSWTALI GY +NG  +KAL+
Sbjct: 251  DEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALE 310

Query: 1106 LFRLMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVLSSLIDMYS 927
            LF  M+   V PDQFTF            LKHGKQIHA ++R  F PN IV+S+LIDMYS
Sbjct: 311  LFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYS 370

Query: 926  KCGDLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKVGTKPDSNTF 747
            KCG L  G +VF+L   +  DVV+WNT++SA+ QHG     IQ+   M++ G KPD  TF
Sbjct: 371  KCGSLGIGRKVFDLMG-NKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITF 429

Query: 746  VVLLSACSHSGLVEEGLECFRSMA-KHGVFPEEEHYLCLVDLLGRAGHFEEAMDWIRKIP 570
            VV+L+ACSHSGLV++GL  F SM+  +G+ P +EHY CL+DLLGRAG FEE MD + K+P
Sbjct: 430  VVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMP 489

Query: 569  HGPSIRAWNALLGACRIHGNVELGKEVAERIMELETSSSGIYVSVSNMYAESGRWECVEK 390
            + P  R WNALLG CRIHG++ELG++ AER++ELE  SS  YV +S++YA  GRWE V+K
Sbjct: 490  YKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQK 549

Query: 389  VRHLMEENEVRKERAASWID 330
            VR LM E +V+KERA SW++
Sbjct: 550  VRQLMNERQVKKERAISWLE 569



 Score = 32.0 bits (71), Expect(2) = e-123
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 331 IDDFAHLFVKLDCSHPSHESIYTAYKQLTLQMEKE 227
           I++  H F   D SHP  E IY+  +QL  QME++
Sbjct: 570 IENKVHSFSVSDSSHPLKEQIYSVLEQLAGQMEED 604



 Score =  134 bits (338), Expect = 5e-29
 Identities = 90/340 (26%), Positives = 170/340 (50%), Gaps = 6/340 (1%)
 Frame = -1

Query: 1490 LRRSPLGFNAHTFSGLLTACVRLEELCLVRQVHGQVFLVGFLS-NLIVSSAIVDAYSKCG 1314
            L R  L  ++ T + LL  C     L   ++VH  + L G       +S+ +++ Y+KCG
Sbjct: 50   LARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCG 109

Query: 1313 CVSDAKRLFDEMKVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQ 1134
               +A+++FD+M  +++ +W  ++ G+AK G +  A KLFD+M E++ VSW  ++  + Q
Sbjct: 110  KEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQ 169

Query: 1133 NGYSYKALDLFRLMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIV 954
             GY  +AL  +       +  + F+F            +   +Q+H +I+  GF  N ++
Sbjct: 170  CGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVL 229

Query: 953  LSSLIDMYSKCGDLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKV 774
             SS++D Y KCG +    ++F+  + S RDV+ W TM+S   + G  +   +LF  M   
Sbjct: 230  SSSVLDAYVKCGLMGDARKLFD--EMSARDVLAWTTMVSGYAKWGDMKSANELFVEM--- 284

Query: 773  GTKPDSN--TFVVLLSACSHSGLVEEGLECFRSMAKHGVFPEEEHY---LCLVDLLGRAG 609
               P+ N  ++  L+S  + +G+  + LE F  M    V P++  +   LC    +    
Sbjct: 285  ---PEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLK 341

Query: 608  HFEEAMDWIRKIPHGPSIRAWNALLGACRIHGNVELGKEV 489
            H ++   ++ +I   P+    +AL+      G++ +G++V
Sbjct: 342  HGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKV 381


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  429 bits (1102), Expect(2) = e-119
 Identities = 209/388 (53%), Positives = 280/388 (72%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1490 LRRSPLGFNAHTFSGLLTACVRLEELCLVRQVHGQVFLVGFLSNLIVSSAIVDAYSKCGC 1311
            LRR  +G+N ++F+GLL  CV+++EL L +Q HGQV + GFLSNL++SS+++DAY+KC  
Sbjct: 174  LRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSE 233

Query: 1310 VSDAKRLFDEMKVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQN 1131
            + DA+RLFDEM ++DVLAWTT+V G+A+ GD+  A +LFD M E+N V+WT+LI GY ++
Sbjct: 234  MGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARH 293

Query: 1130 GYSYKALDLFRLMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVL 951
               +KAL+LF  M+   + PDQFTF            L HGKQIH  +IRT   PN IV+
Sbjct: 294  DLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVV 353

Query: 950  SSLIDMYSKCGDLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKVG 771
            SSLIDMYSKCG L  G  VF+L      DVV+WNT++S++ QHG  +  IQ+F  M+++G
Sbjct: 354  SSLIDMYSKCGCLEVGRLVFDLMG-DKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLG 412

Query: 770  TKPDSNTFVVLLSACSHSGLVEEGLECFRSMAK-HGVFPEEEHYLCLVDLLGRAGHFEEA 594
             KPD  T +VLL+ACSHSGLV+EGL  + S+   HGV P +EHY CL+DLLGRAGHF+  
Sbjct: 413  MKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTL 472

Query: 593  MDWIRKIPHGPSIRAWNALLGACRIHGNVELGKEVAERIMELETSSSGIYVSVSNMYAES 414
            M+ + K+P  P+   WNALLG CR+HGN+E G+EVAE+I+EL+  SS  YV +S+++A  
Sbjct: 473  MNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAV 532

Query: 413  GRWECVEKVRHLMEENEVRKERAASWID 330
            GRWE VE VR LM E  VRK+RA SWI+
Sbjct: 533  GRWELVENVRQLMNERHVRKDRAISWIE 560



 Score = 28.9 bits (63), Expect(2) = e-119
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 331 IDDFAHLFVKLDCSHPSHESIYTAYKQLTLQMEK 230
           I++  H F   D  HP  E IY A KQL   ME+
Sbjct: 561 IENKVHSFTASDRLHPLKEVIYLALKQLAGHMEE 594



 Score =  136 bits (343), Expect = 1e-29
 Identities = 89/340 (26%), Positives = 168/340 (49%), Gaps = 6/340 (1%)
 Frame = -1

Query: 1490 LRRSPLGFNAHTFSGLLTACVRLEELCLVRQVHGQVFLVGFLS-NLIVSSAIVDAYSKCG 1314
            L R+ +   + T + LL  C   + L L + VH  + + G    N  +++ +++ YSKCG
Sbjct: 41   LSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCG 100

Query: 1313 CVSDAKRLFDEMKVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQ 1134
                A ++FDEM  +++ +W  ++ G+AK G +  A KLFD+M E++ VSW  ++  Y +
Sbjct: 101  DYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAK 160

Query: 1133 NGYSYKALDLFRLMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIV 954
            +G+   AL  +R +    +  ++++F            L+  KQ H +++  GF  N ++
Sbjct: 161  SGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVI 220

Query: 953  LSSLIDMYSKCGDLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKV 774
             SS++D Y+KC ++    R+F+  +   RDV+ W TM+S   Q G      +LF LM   
Sbjct: 221  SSSVLDAYAKCSEMGDARRLFD--EMIIRDVLAWTTMVSGYAQWGDVEAARELFDLM--- 275

Query: 773  GTKPDSN--TFVVLLSACSHSGLVEEGLECFRSMAKHGVFPEEEHY---LCLVDLLGRAG 609
               P+ N   +  L++  +   L  + LE F  M    + P++  +   LC    +    
Sbjct: 276  ---PEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLN 332

Query: 608  HFEEAMDWIRKIPHGPSIRAWNALLGACRIHGNVELGKEV 489
            H ++   ++ +    P+    ++L+      G +E+G+ V
Sbjct: 333  HGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLV 372


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like
            [Cucumis sativus]
          Length = 611

 Score =  428 bits (1100), Expect(2) = e-119
 Identities = 213/387 (55%), Positives = 282/387 (72%), Gaps = 1/387 (0%)
 Frame = -1

Query: 1487 RRSPLGFNAHTFSGLLTACVRLEELCLVRQVHGQVFLVGFLSNLIVSSAIVDAYSKCGCV 1308
            RR  +GFNA +F+G+L  CV+L+EL L +QVHGQV + GFLSNL++SS+IVDAYSKCG +
Sbjct: 187  RRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEM 246

Query: 1307 SDAKRLFDEMKVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQNG 1128
              A+ LFDEM VKD+ AWTT+V G+AK GD+ +A +LF +M E+N VSW+ALI GY +N 
Sbjct: 247  RCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNS 306

Query: 1127 YSYKALDLFRLMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVLS 948
              ++ALD F  M+   ++P+Q+TF            LKHGKQ+H  +IRT F  N IV+S
Sbjct: 307  LGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366

Query: 947  SLIDMYSKCGDLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKVGT 768
            SLIDMYSKCG L     VF L   + +DVV+WNTM+SA+ Q+GH    +Q+F  M++ G 
Sbjct: 367  SLIDMYSKCGMLEASCCVFHLMG-NKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGL 425

Query: 767  KPDSNTFVVLLSACSHSGLVEEGLECFRSMA-KHGVFPEEEHYLCLVDLLGRAGHFEEAM 591
            KPD  TF+V+LSACSHSGLV+EGL  F++M   HGVFP++EHY CL+DLLGRAG F E +
Sbjct: 426  KPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELV 485

Query: 590  DWIRKIPHGPSIRAWNALLGACRIHGNVELGKEVAERIMELETSSSGIYVSVSNMYAESG 411
            + +  +   P  R W+ALLG CRIH N+ELG++VAER++EL+  SS  YVS++++YA  G
Sbjct: 486  NELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLG 545

Query: 410  RWECVEKVRHLMEENEVRKERAASWID 330
            +WE VEKVR LM+E  +RKER  SWID
Sbjct: 546  KWESVEKVRELMDEKFIRKERGISWID 572



 Score = 27.3 bits (59), Expect(2) = e-119
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 316 HLFVKLDCSHPSHESIYTAYKQLTLQMEKEF 224
           H F+  D  HP  E IY   +QL    E++F
Sbjct: 578 HSFIASDRLHPLKEEIYLLLEQLARHTEEDF 608



 Score =  128 bits (322), Expect = 3e-27
 Identities = 90/366 (24%), Positives = 168/366 (45%), Gaps = 38/366 (10%)
 Frame = -1

Query: 1454 FSGLLTACVRLEELCLVRQVHGQVFLVGFLS-NLIVSSAIVDAYSKCGCVSDAKRLFDEM 1278
            F  LL  C + +     + VH  +   GF     IV++ ++  Y +CG   +A+++FD+M
Sbjct: 65   FVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKM 124

Query: 1277 KVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQNGYSYKALDLFR 1098
             V+++ +W  ++ G+AK GD+  A KLFD M E++ VSW  ++  Y + G   +A+ L+R
Sbjct: 125  SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYR 184

Query: 1097 LMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVLSSLIDMYSKCG 918
                  +  + F+F            L+  KQ+H +++  GF  N ++ SS++D YSKCG
Sbjct: 185  DFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCG 244

Query: 917  DLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKVGTKPDSN--TFV 744
            ++     +F+  +   +D+  W T++S   + G      +LF  M      P+ N  ++ 
Sbjct: 245  EMRCARTLFD--EMLVKDIHAWTTIVSGYAKWGDMNSASELFHQM------PEKNPVSWS 296

Query: 743  VLLSACSHSGLVEEGLECFRSMAKHGVFPEEEHY---LC--------------------- 636
             L+S  + + L  E L+ F  M K G+ PE+  +   LC                     
Sbjct: 297  ALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRT 356

Query: 635  -----------LVDLLGRAGHFEEAMDWIRKIPHGPSIRAWNALLGACRIHGNVELGKEV 489
                       L+D+  + G  E +      + +   +  WN ++ A   +G+ E   ++
Sbjct: 357  YFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQM 416

Query: 488  AERIME 471
               ++E
Sbjct: 417  FNDMVE 422


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like
            [Cucumis sativus]
          Length = 611

 Score =  426 bits (1096), Expect(2) = e-118
 Identities = 212/387 (54%), Positives = 282/387 (72%), Gaps = 1/387 (0%)
 Frame = -1

Query: 1487 RRSPLGFNAHTFSGLLTACVRLEELCLVRQVHGQVFLVGFLSNLIVSSAIVDAYSKCGCV 1308
            RR  +GFNA +F+G+L  CV+L+EL L +QVHGQV + GFLSNL++SS+IVDAY+KCG +
Sbjct: 187  RRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEM 246

Query: 1307 SDAKRLFDEMKVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQNG 1128
              A+ LFDEM VKD+ AWTT+V G+AK GD+ +A +LF +M E+N VSW+ALI GY +N 
Sbjct: 247  RCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNS 306

Query: 1127 YSYKALDLFRLMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVLS 948
              ++ALD F  M+   ++P+Q+TF            LKHGKQ+H  +IRT F  N IV+S
Sbjct: 307  LGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366

Query: 947  SLIDMYSKCGDLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKVGT 768
            SLIDMYSKCG L     VF L   + +DVV+WNTM+SA+ Q+GH    +Q+F  M++ G 
Sbjct: 367  SLIDMYSKCGMLEASCCVFHLMG-NKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGL 425

Query: 767  KPDSNTFVVLLSACSHSGLVEEGLECFRSMA-KHGVFPEEEHYLCLVDLLGRAGHFEEAM 591
            KPD  TF+V+LSACSHSGLV+EGL  F++M   HGVFP++EHY CL+DLLGRAG F E +
Sbjct: 426  KPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELV 485

Query: 590  DWIRKIPHGPSIRAWNALLGACRIHGNVELGKEVAERIMELETSSSGIYVSVSNMYAESG 411
            + +  +   P  R W+ALLG CRIH N+ELG++VAER++EL+  SS  YVS++++YA  G
Sbjct: 486  NELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLG 545

Query: 410  RWECVEKVRHLMEENEVRKERAASWID 330
            +WE VEKVR LM+E  +RKER  SWID
Sbjct: 546  KWESVEKVRELMDEKFIRKERGISWID 572



 Score = 27.3 bits (59), Expect(2) = e-118
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 316 HLFVKLDCSHPSHESIYTAYKQLTLQMEKEF 224
           H F+  D  HP  E IY   +QL    E++F
Sbjct: 578 HSFIASDRLHPLKEEIYLLLEQLARHTEEDF 608



 Score =  127 bits (319), Expect = 8e-27
 Identities = 89/366 (24%), Positives = 168/366 (45%), Gaps = 38/366 (10%)
 Frame = -1

Query: 1454 FSGLLTACVRLEELCLVRQVHGQVFLVGFLS-NLIVSSAIVDAYSKCGCVSDAKRLFDEM 1278
            F  LL  C + +     + VH  +   GF     IV++ ++  Y +CG   +A+++FD+M
Sbjct: 65   FVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKM 124

Query: 1277 KVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQNGYSYKALDLFR 1098
             V+++ +W  ++ G+AK GD+  A KLFD M E++ VSW  ++  Y + G   +A+ L+R
Sbjct: 125  SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYR 184

Query: 1097 LMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVLSSLIDMYSKCG 918
                  +  + F+F            L+  KQ+H +++  GF  N ++ SS++D Y+KCG
Sbjct: 185  DFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCG 244

Query: 917  DLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKVGTKPDSN--TFV 744
            ++     +F+  +   +D+  W T++S   + G      +LF  M      P+ N  ++ 
Sbjct: 245  EMRCARTLFD--EMLVKDIHAWTTIVSGYAKWGDMNSASELFHQM------PEKNPVSWS 296

Query: 743  VLLSACSHSGLVEEGLECFRSMAKHGVFPEEEHY---LC--------------------- 636
             L+S  + + L  E L+ F  M K G+ PE+  +   LC                     
Sbjct: 297  ALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRT 356

Query: 635  -----------LVDLLGRAGHFEEAMDWIRKIPHGPSIRAWNALLGACRIHGNVELGKEV 489
                       L+D+  + G  E +      + +   +  WN ++ A   +G+ E   ++
Sbjct: 357  YFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQM 416

Query: 488  AERIME 471
               ++E
Sbjct: 417  FNDMVE 422


>ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297326194|gb|EFH56614.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 599

 Score =  416 bits (1068), Expect = e-113
 Identities = 208/388 (53%), Positives = 270/388 (69%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1490 LRRSPLGFNAHTFSGLLTACVRLEELCLVRQVHGQVFLVGFLSNLIVSSAIVDAYSKCGC 1311
            LRRS + FN  +F+GLLTACV+  +L L +Q HGQV + GFLSN+++S +I+DAY+KCG 
Sbjct: 170  LRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229

Query: 1310 VSDAKRLFDEMKVKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQN 1131
            +  AKR FDEM VKD+  WTTL+ G+AK GD+  A KLF EM E+N VSWTALI GYV+ 
Sbjct: 230  MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQ 289

Query: 1130 GYSYKALDLFRLMVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVL 951
            G    ALDLFR M+   V P+QFTF            L+HGKQIH  +IRT   PNAIV 
Sbjct: 290  GSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVT 349

Query: 950  SSLIDMYSKCGDLVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGHRRGTIQLFGLMIKVG 771
            SSLIDMYSK G L    RVF +  +  +D V+WNTM+SA+ QHG     +Q+   MIK  
Sbjct: 350  SSLIDMYSKSGSLEASERVFRIC-YDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFR 408

Query: 770  TKPDSNTFVVLLSACSHSGLVEEGLECFRSM-AKHGVFPEEEHYLCLVDLLGRAGHFEEA 594
              P+  T VV+L+ACSHSGLVEEG+  F SM  +HG+ P++EHY CL+DLLGRAG F+E 
Sbjct: 409  VHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468

Query: 593  MDWIRKIPHGPSIRAWNALLGACRIHGNVELGKEVAERIMELETSSSGIYVSVSNMYAES 414
            M  I ++P  P    WNA+LG CRIHGN ELGK+ AE +++L+  SS  Y+ +S++YA+ 
Sbjct: 469  MSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADH 528

Query: 413  GRWECVEKVRHLMEENEVRKERAASWID 330
            G+WE VEK+R +M++  V KE+A SWI+
Sbjct: 529  GKWELVEKLRGIMKKRRVNKEKAVSWIE 556



 Score =  137 bits (345), Expect = 7e-30
 Identities = 91/345 (26%), Positives = 159/345 (46%), Gaps = 32/345 (9%)
 Frame = -1

Query: 1451 SGLLTACVRLEELCLVRQVHGQVFLVGFLS-NLIVSSAIVDAYSKCGCVSDAKRLFDEMK 1275
            + LL  C   + L   + +H  + + GF   N ++S+ ++  Y KCG   DA ++FD+M 
Sbjct: 50   ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109

Query: 1274 VKDVLAWTTLVYGFAKSGDLITAHKLFDEMQERNSVSWTALIGGYVQNGYSYKALDLFRL 1095
            ++++ +W  +V GF KSG L+ A  +FD M ER+ VSW  ++ GY Q+G  ++AL  F+ 
Sbjct: 110  LRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKE 169

Query: 1094 MVGECVSPDQFTFXXXXXXXXXXXXLKHGKQIHARIIRTGFHPNAIVLSSLIDMYSKCGD 915
            +    +  ++F+F            L+  +Q H +++  GF  N ++  S+ID Y+KCG 
Sbjct: 170  LRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229

Query: 914  LVGGLRVFELTDFSNRDVVIWNTMMSAVGQHGH--------------------------- 816
            +    R F+  + + +D+ IW T++S   + G                            
Sbjct: 230  MESAKRCFD--EMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYV 287

Query: 815  RRGT----IQLFGLMIKVGTKPDSNTFVVLLSACSHSGLVEEGLECFRSMAKHGVFPEEE 648
            R+G+    + LF  MI +  KP+  TF   L A +    +  G +    M +  V P   
Sbjct: 288  RQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAI 347

Query: 647  HYLCLVDLLGRAGHFEEAMDWIRKIPHGPSIRAWNALLGACRIHG 513
                L+D+  ++G  E +    R          WN ++ A   HG
Sbjct: 348  VTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHG 392