BLASTX nr result

ID: Dioscorea21_contig00022009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022009
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40178.3| unnamed protein product [Vitis vinifera]              243   4e-62
ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor ...   243   4e-62
ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|2...   239   5e-61
ref|XP_002513070.1| DNA binding protein, putative [Ricinus commu...   239   8e-61
gb|EAY77240.1| hypothetical protein OsI_05214 [Oryza sativa Indi...   234   3e-59

>emb|CBI40178.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  243 bits (620), Expect = 4e-62
 Identities = 125/197 (63%), Positives = 141/197 (71%), Gaps = 4/197 (2%)
 Frame = -3

Query: 581 SSAPLNRLEYLLSQQGNKFCADCGSPDPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSV 402
           SS P  RLE LL Q GN  CADCGSPDPKWVS+SLGVFICIKCSGVHRSLG H+SKVLS+
Sbjct: 77  SSGPRGRLENLLCQSGNNICADCGSPDPKWVSVSLGVFICIKCSGVHRSLGAHVSKVLSI 136

Query: 401 KLDEWTNEQIEILINHGGNAVVNAKYEAFIPENIKKPKPDSPADERSDFIRRKYELQQFL 222
           KLDEWT+EQ++ L   GGN+  N KYEA IP+ I+KP+PDS  +ERSDFIRRKYE+QQF 
Sbjct: 137 KLDEWTDEQVDTLTGMGGNSEANMKYEASIPDYIRKPRPDSSTEERSDFIRRKYEMQQFF 196

Query: 221 NPNSQIAPGTXXXXXXXXXXXXXXSKQYEKQHTGLR-HGLGQAFRNSWRRKESEQKAAKK 45
           N + Q+                   K YEKQ T  R HGLG AFRNSWRRKE E K  KK
Sbjct: 197 NSDEQM----------FCPFPPQEKKHYEKQTTTHRLHGLGLAFRNSWRRKEPEHKPVKK 246

Query: 44  ---TMGMVEFVGLIKVN 3
              + GM+EFVGLIKVN
Sbjct: 247 SSSSAGMIEFVGLIKVN 263


>ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Vitis vinifera]
          Length = 376

 Score =  243 bits (620), Expect = 4e-62
 Identities = 125/197 (63%), Positives = 141/197 (71%), Gaps = 4/197 (2%)
 Frame = -3

Query: 581 SSAPLNRLEYLLSQQGNKFCADCGSPDPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSV 402
           SS P  RLE LL Q GN  CADCGSPDPKWVS+SLGVFICIKCSGVHRSLG H+SKVLS+
Sbjct: 39  SSGPRGRLENLLCQSGNNICADCGSPDPKWVSVSLGVFICIKCSGVHRSLGAHVSKVLSI 98

Query: 401 KLDEWTNEQIEILINHGGNAVVNAKYEAFIPENIKKPKPDSPADERSDFIRRKYELQQFL 222
           KLDEWT+EQ++ L   GGN+  N KYEA IP+ I+KP+PDS  +ERSDFIRRKYE+QQF 
Sbjct: 99  KLDEWTDEQVDTLTGMGGNSEANMKYEASIPDYIRKPRPDSSTEERSDFIRRKYEMQQFF 158

Query: 221 NPNSQIAPGTXXXXXXXXXXXXXXSKQYEKQHTGLR-HGLGQAFRNSWRRKESEQKAAKK 45
           N + Q+                   K YEKQ T  R HGLG AFRNSWRRKE E K  KK
Sbjct: 159 NSDEQM----------FCPFPPQEKKHYEKQTTTHRLHGLGLAFRNSWRRKEPEHKPVKK 208

Query: 44  ---TMGMVEFVGLIKVN 3
              + GM+EFVGLIKVN
Sbjct: 209 SSSSAGMIEFVGLIKVN 225


>ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|222846469|gb|EEE84016.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  239 bits (611), Expect = 5e-61
 Identities = 124/199 (62%), Positives = 146/199 (73%), Gaps = 7/199 (3%)
 Frame = -3

Query: 578 SAPLNRLEYLLSQQGNKFCADCGSPDPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVK 399
           S PL RLE LLSQ GNK CADCGSPDPKWVSLS GVFICIKCSGVHRSLGVH+SKVLS+K
Sbjct: 11  SGPLKRLERLLSQSGNKTCADCGSPDPKWVSLSYGVFICIKCSGVHRSLGVHLSKVLSIK 70

Query: 398 LDEWTNEQIEILINHGGNAVVNAKYEAFIPENIKKPKPDSPADERSDFIRRKYELQQFLN 219
           LDEWT+EQ+  LI+ GGN   N KYEA +P++ +KP+PD+  +ER DFIRRKYEL++F N
Sbjct: 71  LDEWTDEQVNALIDLGGNTAANKKYEASMPDDYRKPRPDASTEERYDFIRRKYELKEFSN 130

Query: 218 PNSQIA---PGT-XXXXXXXXXXXXXXSKQYEKQHTGLRHGLGQAFRNSWRRKESEQKAA 51
            + Q++   PG+                KQYEKQ T  RH +G AFRNSW RK+SE K  
Sbjct: 131 CDEQMSSPFPGSISSLPTPSNNCPSQDKKQYEKQAT--RHRIGNAFRNSWGRKDSEHKHT 188

Query: 50  KKT---MGMVEFVGLIKVN 3
           KK+    GMVEF+GLIKVN
Sbjct: 189 KKSYSLAGMVEFIGLIKVN 207


>ref|XP_002513070.1| DNA binding protein, putative [Ricinus communis]
           gi|223548081|gb|EEF49573.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 382

 Score =  239 bits (609), Expect = 8e-61
 Identities = 128/198 (64%), Positives = 143/198 (72%), Gaps = 6/198 (3%)
 Frame = -3

Query: 578 SAPLNRLEYLLSQQGNKFCADCGSPDPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVK 399
           S PL +LE LLSQ  NK CADCGSPDPKWVSLS GVFICIKCSGVHRSLGVHISKVLS+K
Sbjct: 36  SGPLKKLEKLLSQSSNKTCADCGSPDPKWVSLSHGVFICIKCSGVHRSLGVHISKVLSIK 95

Query: 398 LDEWTNEQIEILINHGGNAVVNAKYEAFIPENIKKPKPDSPADERSDFIRRKYELQQFLN 219
           LD+WT+EQ+   I+ GGNA  N KYEA IP + KKPKPD+  +ERSDFIRRKYEL QFLN
Sbjct: 96  LDDWTDEQVNNFIDLGGNAAANKKYEACIPNDFKKPKPDATIEERSDFIRRKYELLQFLN 155

Query: 218 PNSQ-IAP--GTXXXXXXXXXXXXXXSKQYEKQHTGLRHGLGQAFRNSWRRKESEQKAAK 48
            + Q I P                   KQY+KQ T  RH +G AFRNSW RK+SE K +K
Sbjct: 156 YSDQMICPYKPQRSSSAAQMSSSSQEKKQYDKQAT--RHRIGNAFRNSWGRKDSENKQSK 213

Query: 47  KT---MGMVEFVGLIKVN 3
           K+    GMVEFVGLIKVN
Sbjct: 214 KSNSMAGMVEFVGLIKVN 231


>gb|EAY77240.1| hypothetical protein OsI_05214 [Oryza sativa Indica Group]
          Length = 381

 Score =  234 bits (596), Expect = 3e-59
 Identities = 124/199 (62%), Positives = 147/199 (73%), Gaps = 4/199 (2%)
 Frame = -3

Query: 587 PVSSAPLNRLEYLLSQQGNKFCADCGSPDPKWVSLSLGVFICIKCSGVHRSLGVHISKVL 408
           PV +A   RLE+LL+Q  NK CADCG+PDPKWVSL+ GVFICIKCSG HRSLGVHISKV+
Sbjct: 46  PVGTA--ERLEHLLNQPANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKVV 103

Query: 407 SVKLDEWTNEQIEILINHGGNAVVNAKYEAFIPENIKKPKPDSPADERSDFIRRKYELQQ 228
           SVKLDEWT+EQ++IL + GGNA VN  YEAFIPEN  KP+ D  ++ R+DF+RRKYELQQ
Sbjct: 104 SVKLDEWTDEQVDILADSGGNAAVNMIYEAFIPENYMKPRQDCSSEGRNDFVRRKYELQQ 163

Query: 227 FLNPNSQIAPGTXXXXXXXXXXXXXXSKQYEK-QHTGL-RHGLGQAFRNSWRRKESEQKA 54
           FL+ N+Q+                   K + + QH+   RHGLG AFRNSWRRKE E K+
Sbjct: 164 FLS-NTQLT-----------CYSQKSGKNHNRVQHSSSNRHGLGHAFRNSWRRKEHESKS 211

Query: 53  AKKT--MGMVEFVGLIKVN 3
            KKT  +GMVEFVGLIKVN
Sbjct: 212 VKKTVEIGMVEFVGLIKVN 230


Top