BLASTX nr result

ID: Dioscorea21_contig00022007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022007
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa...    63   5e-08
emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]    62   1e-07

>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
            vinifera]
          Length = 1472

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
 Frame = +3

Query: 3    LYNQMCQVVEENSADAIQGYLGDKSAGSRLGKQLRHLETIYEDVHKIFAAQ--------- 155
            LYN+MC+V+ EN  +++Q YL ++ A  +L K+L  LE I ED+++I + Q         
Sbjct: 1287 LYNEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQ 1346

Query: 156  ---NESFTAVTEAETKPNASSQSELLNSDNLQNGAMTDSEPDLRTSKSDTEDMTTANNTS 326
                 +  ++ EA T    SS   +   D+ +  A  D+E     +KSD     ++ +T 
Sbjct: 1347 TLLGSNQQSLAEAPTSVAGSSSPSIQQQDDQRPSAEQDTEMRDALTKSDPR-KDSSQSTK 1405

Query: 327  THAKRAKRNAPLEVSKQSASSS----------GKTDDVEMSE 422
            + +++    +P +V   + S S          G  +DVEM E
Sbjct: 1406 SDSEKESSKSPCDVPTSADSHSPQVEPTCVPAGTGEDVEMEE 1447


>emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]
          Length = 755

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
 Frame = +3

Query: 3    LYNQMCQVVEENSADAIQGYLGDKSAGSRLGKQLRHLETIYEDVHKIFAAQ--------- 155
            LYN+MC+V+ EN  +++Q YL ++ A  +L K+L  LE I ED+++I + Q         
Sbjct: 570  LYNEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQ 629

Query: 156  ---NESFTAVTEAETKPNASSQSELLNSDNLQNGAMTDSEPDLRTSKSDTEDMTTANNTS 326
                 +  ++ EA T    SS   +   D+ +  A  D+E      KSD     ++ +T 
Sbjct: 630  TLLGSNQQSLAEAPTSVAGSSSPSIQQQDDQRPSAEQDTEMRDALIKSDPR-KDSSQSTK 688

Query: 327  THAKRAKRNAPLEVSKQSASSS----------GKTDDVEMSE 422
            + +++    +P +V   + S S          G  +DVEM E
Sbjct: 689  SDSEKESSKSPCDVPTSADSHSPQVEPTCVPAGTGEDVEMEE 730


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