BLASTX nr result
ID: Dioscorea21_contig00022007
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00022007 (673 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa... 63 5e-08 emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera] 62 1e-07 >ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis vinifera] Length = 1472 Score = 63.2 bits (152), Expect = 5e-08 Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 22/162 (13%) Frame = +3 Query: 3 LYNQMCQVVEENSADAIQGYLGDKSAGSRLGKQLRHLETIYEDVHKIFAAQ--------- 155 LYN+MC+V+ EN +++Q YL ++ A +L K+L LE I ED+++I + Q Sbjct: 1287 LYNEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQ 1346 Query: 156 ---NESFTAVTEAETKPNASSQSELLNSDNLQNGAMTDSEPDLRTSKSDTEDMTTANNTS 326 + ++ EA T SS + D+ + A D+E +KSD ++ +T Sbjct: 1347 TLLGSNQQSLAEAPTSVAGSSSPSIQQQDDQRPSAEQDTEMRDALTKSDPR-KDSSQSTK 1405 Query: 327 THAKRAKRNAPLEVSKQSASSS----------GKTDDVEMSE 422 + +++ +P +V + S S G +DVEM E Sbjct: 1406 SDSEKESSKSPCDVPTSADSHSPQVEPTCVPAGTGEDVEMEE 1447 >emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera] Length = 755 Score = 62.0 bits (149), Expect = 1e-07 Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 22/162 (13%) Frame = +3 Query: 3 LYNQMCQVVEENSADAIQGYLGDKSAGSRLGKQLRHLETIYEDVHKIFAAQ--------- 155 LYN+MC+V+ EN +++Q YL ++ A +L K+L LE I ED+++I + Q Sbjct: 570 LYNEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQ 629 Query: 156 ---NESFTAVTEAETKPNASSQSELLNSDNLQNGAMTDSEPDLRTSKSDTEDMTTANNTS 326 + ++ EA T SS + D+ + A D+E KSD ++ +T Sbjct: 630 TLLGSNQQSLAEAPTSVAGSSSPSIQQQDDQRPSAEQDTEMRDALIKSDPR-KDSSQSTK 688 Query: 327 THAKRAKRNAPLEVSKQSASSS----------GKTDDVEMSE 422 + +++ +P +V + S S G +DVEM E Sbjct: 689 SDSEKESSKSPCDVPTSADSHSPQVEPTCVPAGTGEDVEMEE 730