BLASTX nr result
ID: Dioscorea21_contig00021965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00021965
(1679 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003574603.1| PREDICTED: DNA polymerase epsilon subunit 2-... 884 0.0
ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays] ... 884 0.0
gb|ACN33812.1| unknown [Zea mays] 883 0.0
gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indi... 879 0.0
ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-... 819 0.0
>ref|XP_003574603.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Brachypodium
distachyon]
Length = 533
Score = 884 bits (2285), Expect = 0.0
Identities = 431/522 (82%), Positives = 481/522 (92%), Gaps = 1/522 (0%)
Frame = -1
Query: 1634 VQRRFKLRGFTLKVDALDEALAFVSRFPEAEDEALDLLIGEIDKESLKSSILDRDAIRRV 1455
+QR+F+LRGFTLKVDAL+EA F++RFP+AED+ALDLL+ E+DKE LKSSILD DA+RRV
Sbjct: 12 LQRKFRLRGFTLKVDALEEAATFLARFPDAEDDALDLLLDELDKEPLKSSILDGDAVRRV 71
Query: 1454 VSLLLEAESAVEP-TXXXXXSRTALRVIDVFLVPRFRYDSIKRVFYEHTGKLPIHGEAGD 1278
VSLL+EAE AV+ + +R+ALRV+D F+VPRF+YD IK+VFYEHTG+L IHGEA D
Sbjct: 72 VSLLVEAEEAVDAASPAATSARSALRVVDSFVVPRFQYDPIKKVFYEHTGRLAIHGEASD 131
Query: 1277 KAALYRDRFQLLLQRLSRDKYFSRPAFDTIMSDSDSYEITPIQSLIGCTGRRWIMGVISQ 1098
KAALYRDR+Q+LLQRL+RDKYFSRPAF+T+M++ DS EIT IQSLIGCTGRRWIMGVISQ
Sbjct: 132 KAALYRDRYQVLLQRLARDKYFSRPAFETVMTEKDSCEITSIQSLIGCTGRRWIMGVISQ 191
Query: 1097 LEEGHFFLEDLTAAVPIDLSSAKITSGFFVENTIIVAEGELLSNGTFQVNTCGFPPLEDR 918
LEE F+LEDLT AVPIDLS+AKITSGFFVENT+IVAEGELLSNG FQVNTCGFPPLEDR
Sbjct: 192 LEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTCGFPPLEDR 251
Query: 917 DTSLSLIMGLDFFGGGILSTEETLRLSGLEKNAVNDMFVILSDIWLDNDETMEKLAVVLD 738
+ SLSL+MGLDFFGGG++ TEETLRLS LE AVNDMFVILSD+WLD+ ETMEKLAVVLD
Sbjct: 252 EASLSLLMGLDFFGGGVIPTEETLRLSSLENKAVNDMFVILSDVWLDSAETMEKLAVVLD 311
Query: 737 GYNSVEVVPSLFILMGNFCSRPCNLAFNSFSSLRSQFGKLGEMISARSRLKEQSRFLLIP 558
GY+SVEVVPSLF+LMGNFCSRPCNLAFNSF LR QFGKLGEMI+AR+RLKE SRFL IP
Sbjct: 312 GYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEMIAARTRLKEHSRFLFIP 371
Query: 557 GPDDAGPSKVLPRCALPKYLTEELQEHVPNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRR 378
GPDDAGPSK LPRCALPKYL EELQ+H+PNAIF SNPCR++FYTQEIV FRQDLLYRMRR
Sbjct: 372 GPDDAGPSKALPRCALPKYLIEELQKHIPNAIFVSNPCRVRFYTQEIVFFRQDLLYRMRR 431
Query: 377 SSLIPPSTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGDR 198
S LIPP+TEETSDPFEHLVATITHQSHLCPLPLTVQPIIWN+DHCLRLYPTPHTIVLGDR
Sbjct: 432 SCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNFDHCLRLYPTPHTIVLGDR 491
Query: 197 SEQKAFKYTGITCFNPGSFSNDSTFAAYRPSTQEVELSALEN 72
SEQKAFKYTGITCFNPGSF+NDSTFAAYRP T+EVELSALE+
Sbjct: 492 SEQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALES 533
>ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays]
gi|195607112|gb|ACG25386.1| DNA polymerase epsilon
subunit 2 [Zea mays] gi|414869832|tpg|DAA48389.1| TPA:
DNA polymerase epsilon subunit 2 [Zea mays]
Length = 533
Score = 884 bits (2285), Expect = 0.0
Identities = 429/521 (82%), Positives = 479/521 (91%), Gaps = 1/521 (0%)
Frame = -1
Query: 1634 VQRRFKLRGFTLKVDALDEALAFVSRFPEAEDEALDLLIGEIDKESLKSSILDRDAIRRV 1455
+QR+F+LRGFTLKVDAL+EA AF+ RFP+AED+ALDLL+ E+DKE L+SSILDRDA+RRV
Sbjct: 12 LQRKFRLRGFTLKVDALEEAAAFLDRFPDAEDDALDLLLDELDKEPLQSSILDRDAVRRV 71
Query: 1454 VSLLLEAESAVE-PTXXXXXSRTALRVIDVFLVPRFRYDSIKRVFYEHTGKLPIHGEAGD 1278
V+LL+EAE A++ + +R+ALRV+D FLVPRF YD IK+VFYEHTG+L +HGEAGD
Sbjct: 72 VALLVEAEEALDVASPAATSARSALRVVDAFLVPRFHYDPIKKVFYEHTGRLAVHGEAGD 131
Query: 1277 KAALYRDRFQLLLQRLSRDKYFSRPAFDTIMSDSDSYEITPIQSLIGCTGRRWIMGVISQ 1098
KA+LYRDR+Q+LLQRLSRDKYFS+PAFDT+ ++ S EIT +QSLIGCTGRRWIMGVISQ
Sbjct: 132 KASLYRDRYQVLLQRLSRDKYFSKPAFDTVATEHCSCEITSVQSLIGCTGRRWIMGVISQ 191
Query: 1097 LEEGHFFLEDLTAAVPIDLSSAKITSGFFVENTIIVAEGELLSNGTFQVNTCGFPPLEDR 918
LEE F+LEDLT AVPIDLS+AKITSGFFVENT+IVAEGELLSNG FQVNTCGFPPLEDR
Sbjct: 192 LEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTCGFPPLEDR 251
Query: 917 DTSLSLIMGLDFFGGGILSTEETLRLSGLEKNAVNDMFVILSDIWLDNDETMEKLAVVLD 738
+ S+SL+MG DFFGGG++ TEETLRLS LEK AVNDMFVILSD+WLDN ETMEKLAVVLD
Sbjct: 252 EASVSLLMGFDFFGGGVIPTEETLRLSSLEKKAVNDMFVILSDVWLDNPETMEKLAVVLD 311
Query: 737 GYNSVEVVPSLFILMGNFCSRPCNLAFNSFSSLRSQFGKLGEMISARSRLKEQSRFLLIP 558
GY+SVEVVPSLF+LMGNFCSRPCNLAFNSF LR QFGKLGEMI+ARSRLKE SRFL IP
Sbjct: 312 GYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRFQFGKLGEMIAARSRLKEHSRFLFIP 371
Query: 557 GPDDAGPSKVLPRCALPKYLTEELQEHVPNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRR 378
GPDDAGPSK LPRCALPKYL EELQ+H+PN+IF SNPCR+KFYTQEIV FRQDLLYRMRR
Sbjct: 372 GPDDAGPSKALPRCALPKYLIEELQKHIPNSIFVSNPCRVKFYTQEIVFFRQDLLYRMRR 431
Query: 377 SSLIPPSTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGDR 198
S LIPP+TEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGD+
Sbjct: 432 SCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGDK 491
Query: 197 SEQKAFKYTGITCFNPGSFSNDSTFAAYRPSTQEVELSALE 75
SEQKAFKYTGITCFNPGSF+NDSTFAAYRP T+EVELSALE
Sbjct: 492 SEQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALE 532
>gb|ACN33812.1| unknown [Zea mays]
Length = 533
Score = 883 bits (2281), Expect = 0.0
Identities = 428/521 (82%), Positives = 479/521 (91%), Gaps = 1/521 (0%)
Frame = -1
Query: 1634 VQRRFKLRGFTLKVDALDEALAFVSRFPEAEDEALDLLIGEIDKESLKSSILDRDAIRRV 1455
+QR+F+LRGFTLKVDAL+EA AF+ RFP+AED+ALDLL+ E+DKE L+SSILDRDA+RRV
Sbjct: 12 LQRKFRLRGFTLKVDALEEAAAFLDRFPDAEDDALDLLLDELDKEPLQSSILDRDAVRRV 71
Query: 1454 VSLLLEAESAVE-PTXXXXXSRTALRVIDVFLVPRFRYDSIKRVFYEHTGKLPIHGEAGD 1278
V+LL+EAE A++ + +R+ALRV+D FLVPRF YD IK+VFYEHTG+L +HGEAGD
Sbjct: 72 VALLVEAEEALDVASPAATSARSALRVVDAFLVPRFHYDPIKKVFYEHTGRLAVHGEAGD 131
Query: 1277 KAALYRDRFQLLLQRLSRDKYFSRPAFDTIMSDSDSYEITPIQSLIGCTGRRWIMGVISQ 1098
KA+LYRDR+Q+LLQRLSRDKYFS+PAFDT+ ++ S EIT +QSLIGCTGRRWIMGVISQ
Sbjct: 132 KASLYRDRYQVLLQRLSRDKYFSKPAFDTVATEHCSCEITSVQSLIGCTGRRWIMGVISQ 191
Query: 1097 LEEGHFFLEDLTAAVPIDLSSAKITSGFFVENTIIVAEGELLSNGTFQVNTCGFPPLEDR 918
LEE F+LEDLT AVPIDLS+AKITSGFFVENT+IVAEGELLSNG FQVNTCGFPPLEDR
Sbjct: 192 LEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTCGFPPLEDR 251
Query: 917 DTSLSLIMGLDFFGGGILSTEETLRLSGLEKNAVNDMFVILSDIWLDNDETMEKLAVVLD 738
+ S+SL+MG DFFGGG++ TEETLRLS L+K AVNDMFVILSD+WLDN ETMEKLAVVLD
Sbjct: 252 EASVSLLMGFDFFGGGVIPTEETLRLSSLKKKAVNDMFVILSDVWLDNPETMEKLAVVLD 311
Query: 737 GYNSVEVVPSLFILMGNFCSRPCNLAFNSFSSLRSQFGKLGEMISARSRLKEQSRFLLIP 558
GY+SVEVVPSLF+LMGNFCSRPCNLAFNSF LR QFGKLGEMI+ARSRLKE SRFL IP
Sbjct: 312 GYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRFQFGKLGEMIAARSRLKEHSRFLFIP 371
Query: 557 GPDDAGPSKVLPRCALPKYLTEELQEHVPNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRR 378
GPDDAGPSK LPRCALPKYL EELQ+H+PN+IF SNPCR+KFYTQEIV FRQDLLYRMRR
Sbjct: 372 GPDDAGPSKALPRCALPKYLIEELQKHIPNSIFVSNPCRVKFYTQEIVFFRQDLLYRMRR 431
Query: 377 SSLIPPSTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGDR 198
S LIPP+TEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGD+
Sbjct: 432 SCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGDK 491
Query: 197 SEQKAFKYTGITCFNPGSFSNDSTFAAYRPSTQEVELSALE 75
SEQKAFKYTGITCFNPGSF+NDSTFAAYRP T+EVELSALE
Sbjct: 492 SEQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALE 532
>gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indica Group]
gi|222630291|gb|EEE62423.1| hypothetical protein
OsJ_17214 [Oryza sativa Japonica Group]
Length = 533
Score = 879 bits (2271), Expect = 0.0
Identities = 426/522 (81%), Positives = 481/522 (92%), Gaps = 1/522 (0%)
Frame = -1
Query: 1634 VQRRFKLRGFTLKVDALDEALAFVSRFPEAEDEALDLLIGEIDKESLKSSILDRDAIRRV 1455
+QR+FKLRGFTLKVDAL+EA AF++RFP+AED+ALDLL+ E+DKE L+SSILDRDA+RRV
Sbjct: 12 LQRKFKLRGFTLKVDALEEAAAFLARFPDAEDDALDLLLDELDKEPLQSSILDRDAVRRV 71
Query: 1454 VSLLLEAESAVEP-TXXXXXSRTALRVIDVFLVPRFRYDSIKRVFYEHTGKLPIHGEAGD 1278
V+LL+EA+ AV+ + +R+ALRV+D F+VPRF YD IK+VFYEHT +L IHGEAGD
Sbjct: 72 VALLVEADEAVDAASPAATSARSALRVVDSFVVPRFHYDPIKKVFYEHTSRLAIHGEAGD 131
Query: 1277 KAALYRDRFQLLLQRLSRDKYFSRPAFDTIMSDSDSYEITPIQSLIGCTGRRWIMGVISQ 1098
KAALYRDR+Q+LLQRL+RD YFS+PAFDT+M++ D+ EIT IQSLIGCTGRRWIMGVISQ
Sbjct: 132 KAALYRDRYQVLLQRLARDIYFSKPAFDTVMTEDDNCEITSIQSLIGCTGRRWIMGVISQ 191
Query: 1097 LEEGHFFLEDLTAAVPIDLSSAKITSGFFVENTIIVAEGELLSNGTFQVNTCGFPPLEDR 918
LEE F+LEDLT AVPIDLS+AKITSGFFVENT+IVAEGELLSNG FQVNTCGFPPLEDR
Sbjct: 192 LEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTCGFPPLEDR 251
Query: 917 DTSLSLIMGLDFFGGGILSTEETLRLSGLEKNAVNDMFVILSDIWLDNDETMEKLAVVLD 738
+ SLS++MGLDFFGGG++ TEET+RLS LEK A+NDMFVILSD+WLDN ETMEKL VVLD
Sbjct: 252 EASLSMLMGLDFFGGGVIPTEETVRLSTLEKKAMNDMFVILSDVWLDNYETMEKLGVVLD 311
Query: 737 GYNSVEVVPSLFILMGNFCSRPCNLAFNSFSSLRSQFGKLGEMISARSRLKEQSRFLLIP 558
GY+S+E VPSLF+LMGNFCSRPCNLAFNSF LR QFGKLGEMI+ARSRLKE SRFL IP
Sbjct: 312 GYDSLEAVPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEMIAARSRLKEHSRFLFIP 371
Query: 557 GPDDAGPSKVLPRCALPKYLTEELQEHVPNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRR 378
GPDDAGPSK LPRCALPKYLTEELQ+H+PNAIF SNPCR+KFYTQEIV FRQDLLYRMRR
Sbjct: 372 GPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIVFFRQDLLYRMRR 431
Query: 377 SSLIPPSTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGDR 198
S LIPP+TEETSDPFEHLVATITHQSHLCPLPLTVQPIIW+YDHCLRLYPTPHTIVLGD+
Sbjct: 432 SCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRLYPTPHTIVLGDK 491
Query: 197 SEQKAFKYTGITCFNPGSFSNDSTFAAYRPSTQEVELSALEN 72
S+QKAFKYTGITCFNPGSF+NDSTFAAYRP T+EVELSALE+
Sbjct: 492 SDQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALES 533
>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
Length = 527
Score = 819 bits (2116), Expect = 0.0
Identities = 398/519 (76%), Positives = 461/519 (88%)
Frame = -1
Query: 1634 VQRRFKLRGFTLKVDALDEALAFVSRFPEAEDEALDLLIGEIDKESLKSSILDRDAIRRV 1455
VQR+FK+RG+TLKV+ALDE L+F+S F +AEDEA+DLL+ E++ ESLKSSILD++++ RV
Sbjct: 9 VQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSILDKESVHRV 68
Query: 1454 VSLLLEAESAVEPTXXXXXSRTALRVIDVFLVPRFRYDSIKRVFYEHTGKLPIHGEAGDK 1275
VSLLLEAE+AVE T +R+ALR++D FL+ +F YD IK++FYE+TG+L IHG+A K
Sbjct: 69 VSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLAIHGDASAK 128
Query: 1274 AALYRDRFQLLLQRLSRDKYFSRPAFDTIMSDSDSYEITPIQSLIGCTGRRWIMGVISQL 1095
+ALYR+RF LL QRLSRD++FS+PAFDT MS S EI+PIQSLIG TG+RW+MGVISQL
Sbjct: 129 SALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRWVMGVISQL 188
Query: 1094 EEGHFFLEDLTAAVPIDLSSAKITSGFFVENTIIVAEGELLSNGTFQVNTCGFPPLEDRD 915
E+GHFFLEDLTA+V I+LS+AKIT+GFF ENTIIVAEGE+ +G FQV+TCGFPPLEDRD
Sbjct: 189 EDGHFFLEDLTASVEINLSNAKITTGFFSENTIIVAEGEMFLDGIFQVSTCGFPPLEDRD 248
Query: 914 TSLSLIMGLDFFGGGILSTEETLRLSGLEKNAVNDMFVILSDIWLDNDETMEKLAVVLDG 735
SL+ + GLDFFGGG L+ EETLRL+GLEK AVNDMFVILSD+WLDN+ETM KLA VLDG
Sbjct: 249 ESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNEETMGKLATVLDG 308
Query: 734 YNSVEVVPSLFILMGNFCSRPCNLAFNSFSSLRSQFGKLGEMISARSRLKEQSRFLLIPG 555
Y +VEVVPSLFI MGNFCS PCNL+F+SFSSLR QFGKLG+MI++ RLKE S+FL IPG
Sbjct: 309 YENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHPRLKEHSQFLFIPG 368
Query: 554 PDDAGPSKVLPRCALPKYLTEELQEHVPNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRRS 375
PDDAGPS VLPRCALP YLTEE ++++PNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRRS
Sbjct: 369 PDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQEIVLFRQDLLYRMRRS 428
Query: 374 SLIPPSTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVLGDRS 195
L+PPS EETSDPFEHLVATITHQSHLCPLPL+VQPIIWNYDHCL LYP PHTIVLGDRS
Sbjct: 429 CLVPPSPEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCLHLYPNPHTIVLGDRS 488
Query: 194 EQKAFKYTGITCFNPGSFSNDSTFAAYRPSTQEVELSAL 78
EQKAFKYTGI CFNPGSFSN+STF AYRP TQEVELSAL
Sbjct: 489 EQKAFKYTGIMCFNPGSFSNESTFVAYRPCTQEVELSAL 527