BLASTX nr result
ID: Dioscorea21_contig00021940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021940 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|2... 67 1e-09 ref|XP_002512527.1| conserved hypothetical protein [Ricinus comm... 62 6e-08 ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 ref|NP_568489.1| uncharacterized protein [Arabidopsis thaliana] ... 59 5e-07 ref|XP_002872235.1| hypothetical protein ARALYDRAFT_489512 [Arab... 58 7e-07 >ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|222865092|gb|EEF02223.1| predicted protein [Populus trichocarpa] Length = 82 Score = 67.4 bits (163), Expect = 1e-09 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 20/76 (26%) Frame = +2 Query: 140 PSYMRWPELGLDS-----LRWPEFDFSVF---------------FDDMLWTIMVVFETLT 259 PS RWPE G LRWPEFDFS F DD+LWT + E++ Sbjct: 7 PSIFRWPEFGFSMPSSSILRWPEFDFSYFTTRLTLESLRWLDFAIDDVLWTFVTALESVA 66 Query: 260 LVTAVCFFYVFCGCSI 307 L +C+F+VFCGC++ Sbjct: 67 LTAMLCYFFVFCGCTL 82 >ref|XP_002512527.1| conserved hypothetical protein [Ricinus communis] gi|223548488|gb|EEF49979.1| conserved hypothetical protein [Ricinus communis] Length = 78 Score = 61.6 bits (148), Expect = 6e-08 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 4/79 (5%) Frame = +2 Query: 83 AVSMFRWFEVNIFYAVRSVPSYMRWPELGLDSL---RWPEFDFSV-FFDDMLWTIMVVFE 250 + S RW V+ Y S +RWP+ S RWPE + + DD++W ++ FE Sbjct: 6 STSALRWLGVDTAY------SLLRWPQFMSSSYLSPRWPELNLNFSIVDDVVWGLITAFE 59 Query: 251 TLTLVTAVCFFYVFCGCSI 307 ++ LV+ +CFF++FCGC+I Sbjct: 60 SVALVSMLCFFFLFCGCTI 78 >ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|222871454|gb|EEF08585.1| predicted protein [Populus trichocarpa] Length = 96 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 17/92 (18%) Frame = +2 Query: 83 AVSMFR-WFEVNIFYAVRSV----PSYMRWPELGLDS------------LRWPEFDFSVF 211 + S FR W +++ Y S+ S +RWP + +RWPE DFS+ Sbjct: 6 STSTFRQWLGLDVAYTTSSIWASSISVLRWPSQLRTTTNPSRWWAPPRMMRWPELDFSIL 65 Query: 212 FDDMLWTIMVVFETLTLVTAVCFFYVFCGCSI 307 DD++W+++ FE++ LV+ + FF++FCGC++ Sbjct: 66 -DDVVWSLVTAFESVALVSMLAFFFLFCGCTV 96 >ref|NP_568489.1| uncharacterized protein [Arabidopsis thaliana] gi|21593513|gb|AAM65480.1| unknown [Arabidopsis thaliana] gi|111074252|gb|ABH04499.1| At5g26790 [Arabidopsis thaliana] gi|332006222|gb|AED93605.1| uncharacterized protein [Arabidopsis thaliana] Length = 68 Score = 58.5 bits (140), Expect = 5e-07 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Frame = +2 Query: 89 SMFRWFEVNIFYAVRSVPSYMRW--PELGLDSLRWPEFDFSVFFDDMLWTIMVVFETLTL 262 S RW+ F + SVP ++ W PEL L SV DD++W ++ FE++ L Sbjct: 3 SSIRWWWPIHFTSSGSVPRWLSWRRPELSL---------LSVVVDDVVWKVVTAFESVAL 53 Query: 263 VTAVCFFYVFCGCSI 307 V+ +CFF++FCGC++ Sbjct: 54 VSMLCFFFLFCGCTV 68 >ref|XP_002872235.1| hypothetical protein ARALYDRAFT_489512 [Arabidopsis lyrata subsp. lyrata] gi|297318072|gb|EFH48494.1| hypothetical protein ARALYDRAFT_489512 [Arabidopsis lyrata subsp. lyrata] Length = 66 Score = 58.2 bits (139), Expect = 7e-07 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Frame = +2 Query: 89 SMFRWFEVNIFYAVRSVPSYMRW--PELGLDSLRWPEFDFSVFFDDMLWTIMVVFETLTL 262 S RW+ F + S P ++ W PEL L SV FDD++W ++ FE++ L Sbjct: 3 SSIRWWWPIHFTSPGSAPRWLSWRRPELSL---------LSVVFDDVVWKVVTAFESVAL 53 Query: 263 VTAVCFFYVFCGC 301 V+ +CFF++FCGC Sbjct: 54 VSMLCFFFLFCGC 66