BLASTX nr result

ID: Dioscorea21_contig00021938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021938
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...    80   3e-17
emb|CBI22579.3| unnamed protein product [Vitis vinifera]               80   3e-17
ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ...    91   1e-16
ref|XP_002513614.1| conserved hypothetical protein [Ricinus comm...    84   3e-16
ref|XP_003535579.1| PREDICTED: uncharacterized protein LOC100785...    88   6e-16

>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score = 79.7 bits (195), Expect(2) = 3e-17
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVVP 382
            KRVRAFS++QE  I+ L+E+FK HK+C++MIA+AL GD   TAAQVSRKLK LGL VP
Sbjct: 1006 KRVRAFSKDQEETIRALYEQFKGHKRCTYMIASALAGDDILTAAQVSRKLKQLGLHVP 1063



 Score = 33.5 bits (75), Expect(2) = 3e-17
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 21/69 (30%)
 Frame = +3

Query: 3    VSAKLRRLGLMISGRKRFVSDDVP--GSSNKL-------------------KDSSFPETS 119
            VS KL++LGL I+ +KR +  DVP   S+N+L                    + S    S
Sbjct: 942  VSNKLKQLGLKIAPKKRMLQVDVPLSDSTNQLMEEARAVGEESAHLVCSNNSEGSLVRKS 1001

Query: 120  THNRKRVRA 146
             H RKRVRA
Sbjct: 1002 LHTRKRVRA 1010



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVV 379
            KR    S E E  IK L+E+FKD + CS +IA ALD D K +  QVS KLK LGL +
Sbjct: 897  KRRLVLSAEVEKNIKDLYEKFKDDRHCSRLIAEALDPDCKVSPVQVSNKLKQLGLKI 953


>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
          Length = 1217

 Score = 79.7 bits (195), Expect(2) = 3e-17
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVVP 382
            KRVRAFS++QE  I+ L+E+FK HK+C++MIA+AL GD   TAAQVSRKLK LGL VP
Sbjct: 1015 KRVRAFSKDQEETIRALYEQFKGHKRCTYMIASALAGDDILTAAQVSRKLKQLGLHVP 1072



 Score = 33.5 bits (75), Expect(2) = 3e-17
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 21/69 (30%)
 Frame = +3

Query: 3    VSAKLRRLGLMISGRKRFVSDDVP--GSSNKL-------------------KDSSFPETS 119
            VS KL++LGL I+ +KR +  DVP   S+N+L                    + S    S
Sbjct: 951  VSNKLKQLGLKIAPKKRMLQVDVPLSDSTNQLMEEARAVGEESAHLVCSNNSEGSLVRKS 1010

Query: 120  THNRKRVRA 146
             H RKRVRA
Sbjct: 1011 LHTRKRVRA 1019



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVV 379
            KR    S E E  IK L+E+FKD + CS +IA ALD D K +  QVS KLK LGL +
Sbjct: 906  KRRLVLSAEVEKNIKDLYEKFKDDRHCSRLIAEALDPDCKVSPVQVSNKLKQLGLKI 962


>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
            gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
            factor [Medicago truncatula]
          Length = 1335

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVVP 382
            KRV AF+E+QE  IKVLFE FKDH++CS+MIANALD DGK+T AQVSRKLK LGL VP
Sbjct: 1041 KRVSAFNEDQEARIKVLFEDFKDHRRCSYMIANALDKDGKFTPAQVSRKLKQLGLCVP 1098



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVV 379
            K+      E E +IK L+E+FKD + CS  IA  LD DGK + AQ+S KLK LGL +
Sbjct: 938  KKKLILDAELEIQIKDLYEKFKDDRNCSRRIAEVLDPDGKISTAQISSKLKKLGLTI 994


>ref|XP_002513614.1| conserved hypothetical protein [Ricinus communis]
            gi|223547522|gb|EEF49017.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1047

 Score = 83.6 bits (205), Expect(2) = 3e-16
 Identities = 39/58 (67%), Positives = 49/58 (84%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVVP 382
            K+VRAFS++QE  I+ LFE+FK+HK+CS+MIANAL  D  +TAAQVSRKLK LGL +P
Sbjct: 925  KKVRAFSKDQEEIIRALFEQFKEHKRCSYMIANALAADNSFTAAQVSRKLKQLGLHIP 982



 Score = 26.2 bits (56), Expect(2) = 3e-16
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +3

Query: 12   KLRRLGLMISGRKRFVSDDVPGSSNKLKDSSFP----ETSTHNRKRVRA 146
            KL++LGL +S +KR  + D        + S+FP    E   + RK+VRA
Sbjct: 888  KLKQLGLKVSSKKRLRNVD-------KEFSTFPDQLVENGRNTRKKVRA 929


>ref|XP_003535579.1| PREDICTED: uncharacterized protein LOC100785399 [Glycine max]
          Length = 1042

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/58 (74%), Positives = 51/58 (87%)
 Frame = +2

Query: 209  KRVRAFSEEQEHEIKVLFERFKDHKKCSHMIANALDGDGKYTAAQVSRKLKNLGLVVP 382
            KRV+AF+E QE  IKVL+E+FKDH++CS+MIANALD DGK TAAQVSRKLK LGL +P
Sbjct: 948  KRVQAFNEAQEALIKVLYEQFKDHRRCSYMIANALDEDGKITAAQVSRKLKQLGLSLP 1005


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