BLASTX nr result

ID: Dioscorea21_contig00021923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021923
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519289.1| vacuolar protein sorting-associated protein,...   306   2e-81
ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   302   6e-80
ref|XP_003574966.1| PREDICTED: uncharacterized protein LOC100837...   300   2e-79
dbj|BAD19476.1| vacuolar protein sorting 13C protein-like [Oryza...   297   2e-78
ref|NP_001046831.2| Os02g0470400 [Oryza sativa Japonica Group] g...   297   2e-78

>ref|XP_002519289.1| vacuolar protein sorting-associated protein, putative [Ricinus
            communis] gi|223541604|gb|EEF43153.1| vacuolar protein
            sorting-associated protein, putative [Ricinus communis]
          Length = 4423

 Score =  306 bits (785), Expect = 2e-81
 Identities = 158/263 (60%), Positives = 196/263 (74%), Gaps = 3/263 (1%)
 Frame = -1

Query: 785  TLSIDIQVDFLHGLMSDKEYKVILDCAYMNLSEQPNLPPSFRGNIVGMKDSIRMIADKVN 606
            T S++++VDFLH ++SDKEY V LDCAYMNL E+P LPPSFRG+    KD++R++ DKVN
Sbjct: 1454 TFSLEVKVDFLHAVISDKEYNVTLDCAYMNLYEEPRLPPSFRGSKAASKDTMRLLVDKVN 1513

Query: 605  LNSQIALSRTVAVMAVEVNYALLELCNSRDEQSPLAQIALEGLWVSYRTTSLFEMDLYVT 426
            +NSQI  S+TV ++AV VNYALLELCN   E SPLA +ALEGLWVSYRT+SL E DLY+T
Sbjct: 1514 MNSQILFSQTVNIVAVNVNYALLELCNGIHE-SPLAHLALEGLWVSYRTSSLSETDLYIT 1572

Query: 425  IPKFSVLDIRPDTKPEMRLMLGSYADVSKPDKSENFAFP---GAFLAACRNDESSYDVES 255
            IPKFS++DIRPDTKPEMRLMLGS  D +K   S NF      G+F     + +S +D+  
Sbjct: 1573 IPKFSIMDIRPDTKPEMRLMLGSSTDATKQASSGNFPQSLNRGSFRRI--HSQSGFDM-- 1628

Query: 254  ITKDASNLTMLIMDYRWRSSFQSFVIGIQQPRVLVVLDFILAVAEYLFPALGTITGREET 75
               D    TM +MDYRWR S QS V+ IQQPR+LVV DF+LAV E+  PALG ITGREET
Sbjct: 1629 ---DLPCSTMFLMDYRWRLSSQSCVVRIQQPRILVVPDFLLAVGEFFVPALGAITGREET 1685

Query: 74   LDPKNDPLTNCDNIILSGFIYMQ 6
            +DPK DP+  C++I+LS  +Y Q
Sbjct: 1686 MDPKKDPICRCNSIVLSEPVYKQ 1708


>ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101213129
            [Cucumis sativus]
          Length = 4194

 Score =  302 bits (773), Expect = 6e-80
 Identities = 156/260 (60%), Positives = 188/260 (72%)
 Frame = -1

Query: 785  TLSIDIQVDFLHGLMSDKEYKVILDCAYMNLSEQPNLPPSFRGNIVGMKDSIRMIADKVN 606
            T S++I V  LHG+MSDKEYKVI+DC YMNL EQP LPPSFRG     +D++R++ DKVN
Sbjct: 1453 TFSLEIVVGLLHGMMSDKEYKVIVDCLYMNLYEQPILPPSFRGKKSESEDTMRLLVDKVN 1512

Query: 605  LNSQIALSRTVAVMAVEVNYALLELCNSRDEQSPLAQIALEGLWVSYRTTSLFEMDLYVT 426
             NSQI LSRTV +++V VN ALLELCN   E+SPLA I LEGLWV YR TS  E DLY+T
Sbjct: 1513 TNSQILLSRTVTIVSVVVNKALLELCNGIQEESPLALIELEGLWVLYRMTSFLETDLYLT 1572

Query: 425  IPKFSVLDIRPDTKPEMRLMLGSYADVSKPDKSENFAFPGAFLAACRNDESSYDVESITK 246
            IPKFS+LDIRP TKPEMRLMLGS  D SK    ENF FP        +   +Y   ++  
Sbjct: 1573 IPKFSILDIRPVTKPEMRLMLGSSTDTSKQAPLENFPFPKK-----NSFGKAYSEGNLDM 1627

Query: 245  DASNLTMLIMDYRWRSSFQSFVIGIQQPRVLVVLDFILAVAEYLFPALGTITGREETLDP 66
            D    TM ++DYRWR   QSFV+ +QQPRVLVV DF+LAV E+  PAL +ITGREET+DP
Sbjct: 1628 DIPVATMFVLDYRWRKESQSFVLRVQQPRVLVVPDFLLAVVEFFVPALRSITGREETMDP 1687

Query: 65   KNDPLTNCDNIILSGFIYMQ 6
            KNDP+   ++I+LSG I+ Q
Sbjct: 1688 KNDPIGKNNSIVLSGSIHRQ 1707


>ref|XP_003574966.1| PREDICTED: uncharacterized protein LOC100837501 [Brachypodium
            distachyon]
          Length = 3940

 Score =  300 bits (768), Expect = 2e-79
 Identities = 157/260 (60%), Positives = 188/260 (72%)
 Frame = -1

Query: 782  LSIDIQVDFLHGLMSDKEYKVILDCAYMNLSEQPNLPPSFRGNIVGMKDSIRMIADKVNL 603
            LS+ +Q+  LH +MSDKEY VI  C   NLSE PNLPPSFR N+   K+SIR++ADKVNL
Sbjct: 1502 LSMKVQIGLLHAVMSDKEYSVITSCISTNLSETPNLPPSFRENVNRTKESIRLLADKVNL 1561

Query: 602  NSQIALSRTVAVMAVEVNYALLELCNSRDEQSPLAQIALEGLWVSYRTTSLFEMDLYVTI 423
            N+ + LSRTV +M V V YALLEL N  D ++PLA++ALEGLWVSYRTTSL EMDLY+++
Sbjct: 1562 NNHLLLSRTVVIMTVNVQYALLELYNRTDTEAPLAELALEGLWVSYRTTSLLEMDLYLSL 1621

Query: 422  PKFSVLDIRPDTKPEMRLMLGSYADVSKPDKSENFAFPGAFLAACRNDESSYDVESITKD 243
             KFS+ DIRPDTK EMRLMLGSY+D SK                    + S DV      
Sbjct: 1622 LKFSIRDIRPDTKSEMRLMLGSYSDTSK----------------LNTPDPSTDV-----G 1660

Query: 242  ASNLTMLIMDYRWRSSFQSFVIGIQQPRVLVVLDFILAVAEYLFPALGTITGREETLDPK 63
             S+LTMLI+DYRWR SFQS VI IQQPR+LVVLDF+L V EY  P+LGTITGREE+LDPK
Sbjct: 1661 VSSLTMLILDYRWRPSFQSIVIRIQQPRILVVLDFLLPVVEYFVPSLGTITGREESLDPK 1720

Query: 62   NDPLTNCDNIILSGFIYMQK 3
            NDPL   D+IIL   +++QK
Sbjct: 1721 NDPLMTSDDIILCEPVFLQK 1740


>dbj|BAD19476.1| vacuolar protein sorting 13C protein-like [Oryza sativa Japonica
            Group] gi|47497534|dbj|BAD19586.1| vacuolar protein
            sorting 13C protein-like [Oryza sativa Japonica Group]
          Length = 4190

 Score =  297 bits (761), Expect = 2e-78
 Identities = 157/260 (60%), Positives = 185/260 (71%)
 Frame = -1

Query: 782  LSIDIQVDFLHGLMSDKEYKVILDCAYMNLSEQPNLPPSFRGNIVGMKDSIRMIADKVNL 603
            L +  Q+  LHG+MSDKEY VI  C   NLSE PNLPP FR N+   KDSIR++ADKVNL
Sbjct: 1543 LCMKFQIGLLHGIMSDKEYNVITSCISTNLSEAPNLPPGFRDNVNRTKDSIRLLADKVNL 1602

Query: 602  NSQIALSRTVAVMAVEVNYALLELCNSRDEQSPLAQIALEGLWVSYRTTSLFEMDLYVTI 423
            N+ + LSRTV VM V+V YAL EL N  D +SPLA++ LEGLWVSYRTTSLFEMDLY++I
Sbjct: 1603 NNHLLLSRTVVVMTVDVQYALFELRNGPDAESPLAELVLEGLWVSYRTTSLFEMDLYLSI 1662

Query: 422  PKFSVLDIRPDTKPEMRLMLGSYADVSKPDKSENFAFPGAFLAACRNDESSYDVESITKD 243
             KF + DIRPDTK EMRLMLGSY++ SK                    + S DV      
Sbjct: 1663 LKFLIHDIRPDTKSEMRLMLGSYSETSK----------------LSTQDPSSDV-----G 1701

Query: 242  ASNLTMLIMDYRWRSSFQSFVIGIQQPRVLVVLDFILAVAEYLFPALGTITGREETLDPK 63
             SNLTM+I+DYRWRSSFQSFVI IQ+PRVLVVLDF+L V E+  P LGTITGREE+LDPK
Sbjct: 1702 VSNLTMVILDYRWRSSFQSFVIRIQEPRVLVVLDFLLPVVEFFVPNLGTITGREESLDPK 1761

Query: 62   NDPLTNCDNIILSGFIYMQK 3
            NDPL   D+IIL   ++ Q+
Sbjct: 1762 NDPLIKSDDIILCEPVFFQR 1781


>ref|NP_001046831.2| Os02g0470400 [Oryza sativa Japonica Group]
            gi|255670894|dbj|BAF08745.2| Os02g0470400 [Oryza sativa
            Japonica Group]
          Length = 2989

 Score =  297 bits (761), Expect = 2e-78
 Identities = 157/260 (60%), Positives = 185/260 (71%)
 Frame = -1

Query: 782  LSIDIQVDFLHGLMSDKEYKVILDCAYMNLSEQPNLPPSFRGNIVGMKDSIRMIADKVNL 603
            L +  Q+  LHG+MSDKEY VI  C   NLSE PNLPP FR N+   KDSIR++ADKVNL
Sbjct: 510  LCMKFQIGLLHGIMSDKEYNVITSCISTNLSEAPNLPPGFRDNVNRTKDSIRLLADKVNL 569

Query: 602  NSQIALSRTVAVMAVEVNYALLELCNSRDEQSPLAQIALEGLWVSYRTTSLFEMDLYVTI 423
            N+ + LSRTV VM V+V YAL EL N  D +SPLA++ LEGLWVSYRTTSLFEMDLY++I
Sbjct: 570  NNHLLLSRTVVVMTVDVQYALFELRNGPDAESPLAELVLEGLWVSYRTTSLFEMDLYLSI 629

Query: 422  PKFSVLDIRPDTKPEMRLMLGSYADVSKPDKSENFAFPGAFLAACRNDESSYDVESITKD 243
             KF + DIRPDTK EMRLMLGSY++ SK                    + S DV      
Sbjct: 630  LKFLIHDIRPDTKSEMRLMLGSYSETSK----------------LSTQDPSSDV-----G 668

Query: 242  ASNLTMLIMDYRWRSSFQSFVIGIQQPRVLVVLDFILAVAEYLFPALGTITGREETLDPK 63
             SNLTM+I+DYRWRSSFQSFVI IQ+PRVLVVLDF+L V E+  P LGTITGREE+LDPK
Sbjct: 669  VSNLTMVILDYRWRSSFQSFVIRIQEPRVLVVLDFLLPVVEFFVPNLGTITGREESLDPK 728

Query: 62   NDPLTNCDNIILSGFIYMQK 3
            NDPL   D+IIL   ++ Q+
Sbjct: 729  NDPLIKSDDIILCEPVFFQR 748


Top