BLASTX nr result
ID: Dioscorea21_contig00021872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00021872
(517 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin... 313 9e-84
ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [... 305 2e-81
ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [... 305 3e-81
ref|NP_194113.1| glycoside hydrolase family 28 protein / polygal... 305 3e-81
ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabi... 303 9e-81
>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
putative [Ricinus communis]
Length = 446
Score = 313 bits (802), Expect = 9e-84
Identities = 142/172 (82%), Positives = 160/172 (93%)
Frame = +1
Query: 1 RIEHLRRHGGTTLYVPPGVWLTGSFNLTSHMTLFLARGAVIKATRDVWNWPLMDPLPSYG 180
RI+HL+R GGT LY+PPGV+LTGSFNLTSHMTL+LARGAVIKAT+D WNWPL+ PLPSYG
Sbjct: 67 RIQHLKRRGGTLLYIPPGVFLTGSFNLTSHMTLYLARGAVIKATQDTWNWPLIAPLPSYG 126
Query: 181 RGRELPGGRYKSLIHGNGLRDVVITGENGTIDGQGDVWWNMWRRRSLRFTRPHLLEFMHS 360
RGRE GGRY S IHG+GL DVVITGENGTIDGQGD+WWNMWR+R+L+FTRP+L+EF++S
Sbjct: 127 RGRERLGGRYMSFIHGDGLHDVVITGENGTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNS 186
Query: 361 RNIIISNVVFLNSPFWNIHPVYCSNVVIKSVTILAPHDSPNTDGIDPDSSSN 516
R IIISNV+F NSPFWNIHPVYCSNVVI+ VTILAPHDSPNTDGIDPDSSSN
Sbjct: 187 RGIIISNVIFQNSPFWNIHPVYCSNVVIRFVTILAPHDSPNTDGIDPDSSSN 238
>ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 305 bits (781), Expect = 2e-81
Identities = 140/172 (81%), Positives = 160/172 (93%)
Frame = +1
Query: 1 RIEHLRRHGGTTLYVPPGVWLTGSFNLTSHMTLFLARGAVIKATRDVWNWPLMDPLPSYG 180
RI+HLRR GGT LYVPPGV+LT SFNLTSHMTL+LA GAVIKAT+++ NWPL+ PLPSYG
Sbjct: 98 RIQHLRRRGGTVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIAPLPSYG 157
Query: 181 RGRELPGGRYKSLIHGNGLRDVVITGENGTIDGQGDVWWNMWRRRSLRFTRPHLLEFMHS 360
RGRELPGGRY S IHG+GL DVVITGENGTIDGQGDVWWNMWR+R+L+FTRP+L+EF++S
Sbjct: 158 RGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNS 217
Query: 361 RNIIISNVVFLNSPFWNIHPVYCSNVVIKSVTILAPHDSPNTDGIDPDSSSN 516
++IIISNV+F NSPFWNIHPVYCSNVV++ VTILAP DSPNTDGIDPDSSSN
Sbjct: 218 QDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSN 269
>ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 305 bits (780), Expect = 3e-81
Identities = 140/172 (81%), Positives = 160/172 (93%)
Frame = +1
Query: 1 RIEHLRRHGGTTLYVPPGVWLTGSFNLTSHMTLFLARGAVIKATRDVWNWPLMDPLPSYG 180
RI+HLRR GGT LYVPPGV+LT SFNLTSHMTL+LA GAVIKAT+++ NWPL+ PLPSYG
Sbjct: 66 RIQHLRRRGGTVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYG 125
Query: 181 RGRELPGGRYKSLIHGNGLRDVVITGENGTIDGQGDVWWNMWRRRSLRFTRPHLLEFMHS 360
RGRELPGGRY S IHG+GL DVVITGENGTIDGQGDVWWNMWR+R+L+FTRP+L+EF++S
Sbjct: 126 RGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNS 185
Query: 361 RNIIISNVVFLNSPFWNIHPVYCSNVVIKSVTILAPHDSPNTDGIDPDSSSN 516
++IIISNV+F NSPFWNIHPVYCSNVV++ VTILAP DSPNTDGIDPDSSSN
Sbjct: 186 QDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSN 237
>ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase
[Arabidopsis thaliana] gi|7269231|emb|CAB81300.1|
putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase
[Arabidopsis thaliana] gi|22136230|gb|AAM91193.1|
putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana]
Length = 444
Score = 305 bits (780), Expect = 3e-81
Identities = 137/172 (79%), Positives = 156/172 (90%)
Frame = +1
Query: 1 RIEHLRRHGGTTLYVPPGVWLTGSFNLTSHMTLFLARGAVIKATRDVWNWPLMDPLPSYG 180
RI+HL+R GGT LY+PPGV+LT SFNLTSHMTL+LA+GAVI+A +D WNWPL+DPLPSYG
Sbjct: 66 RIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPSYG 125
Query: 181 RGRELPGGRYKSLIHGNGLRDVVITGENGTIDGQGDVWWNMWRRRSLRFTRPHLLEFMHS 360
RGRELPGGRY S IHG+GLRDVVITG+NGTIDGQG+VWWNMWR R+L++TRP+L+EF S
Sbjct: 126 RGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDS 185
Query: 361 RNIIISNVVFLNSPFWNIHPVYCSNVVIKSVTILAPHDSPNTDGIDPDSSSN 516
+ IIISNV+F NSPFWNIHPVYCSNVVI VTILAP DSPNTDGIDPDSS N
Sbjct: 186 KEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYN 237
>ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata] gi|297313524|gb|EFH43947.1| glycoside hydrolase
family 28 protein [Arabidopsis lyrata subsp. lyrata]
Length = 444
Score = 303 bits (776), Expect = 9e-81
Identities = 136/172 (79%), Positives = 155/172 (90%)
Frame = +1
Query: 1 RIEHLRRHGGTTLYVPPGVWLTGSFNLTSHMTLFLARGAVIKATRDVWNWPLMDPLPSYG 180
RI+HL+R GGT LY+PPGV+LT SFNLTSHMT +LA+GAVI+A +D WNWPL+DPLPSYG
Sbjct: 66 RIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTFYLAKGAVIRAVQDTWNWPLIDPLPSYG 125
Query: 181 RGRELPGGRYKSLIHGNGLRDVVITGENGTIDGQGDVWWNMWRRRSLRFTRPHLLEFMHS 360
RGRELPGGRY S IHG+GLRDVVITG+NGTIDGQG+VWWNMWR R+L++TRP+L+EF S
Sbjct: 126 RGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDS 185
Query: 361 RNIIISNVVFLNSPFWNIHPVYCSNVVIKSVTILAPHDSPNTDGIDPDSSSN 516
+ IIISNV+F NSPFWNIHPVYCSNVVI VTILAP DSPNTDGIDPDSS N
Sbjct: 186 KEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYN 237