BLASTX nr result

ID: Dioscorea21_contig00021829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021829
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324317.1| AP2/ERF domain-containing transcription fact...   162   3e-38
gb|AFK41748.1| unknown [Medicago truncatula]                          160   1e-37
ref|XP_003603319.1| Ethylene-responsive transcription factor SHI...   160   1e-37
gb|ADE41114.1| AP2 domain class transcription factor [Malus x do...   158   6e-37
ref|XP_002297803.1| AP2/ERF domain-containing transcription fact...   158   6e-37

>ref|XP_002324317.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222865751|gb|EEF02882.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 194

 Score =  162 bits (411), Expect = 3e-38
 Identities = 91/187 (48%), Positives = 111/187 (59%), Gaps = 23/187 (12%)
 Frame = +1

Query: 1   PQQRFRGVRQRHWGSWLSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXKLMCGPKARTNF 180
           PQQR+RGVRQRHWGSW+SEIRHPLLKTRIWLGTFET            +LMCGP+ARTNF
Sbjct: 4   PQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNF 63

Query: 181 TYXXXXXXXXXTKFLSATLTAKLHRCHLQSLQIA-QTSSKELPGKSAVPPVRNIGEKSVS 357
            Y         +K LSATLTAKLHRC++ SLQ+  QTS +E   +    P   +   + S
Sbjct: 64  PYNPNASQSASSKLLSATLTAKLHRCYMASLQVTKQTSLQEQKQQQQKAPTSLVKTPTNS 123

Query: 358 VI----------------------DNTVRKESEGDKEIEFMSCLEDHHIDQMIEELLDSG 471
           ++                       N V K+ + D   +F+  LEDHHI+QMIEELLD G
Sbjct: 124 IVIKSEELDALQPEKSPLQVQEAEANWVYKKVQVDNNQQFIKPLEDHHIEQMIEELLDYG 183

Query: 472 FSMEFCS 492
            S+E CS
Sbjct: 184 -SIELCS 189


>gb|AFK41748.1| unknown [Medicago truncatula]
          Length = 189

 Score =  160 bits (406), Expect = 1e-37
 Identities = 92/181 (50%), Positives = 111/181 (61%), Gaps = 17/181 (9%)
 Frame = +1

Query: 1   PQQRFRGVRQRHWGSWLSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXKLMCGPKARTNF 180
           PQQR+RGVRQRHWGSW+SEIRHP+LKTRIWLGTFET            +LMCG +ARTNF
Sbjct: 4   PQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNF 63

Query: 181 TYXXXXXXXXXTKFLSATLTAKLHRCHLQSLQIAQTSSKELPGKSAVPPV----RNIGEK 348
            Y         +K LSATLTAKLHRC++ SLQI +  S + P K +   V     N   K
Sbjct: 64  PYNPNVSQSSSSKLLSATLTAKLHRCYMASLQITRPISLQQPQKQSSQSVNISTNNAPMK 123

Query: 349 SVSVIDNTVR----KESEG---------DKEIEFMSCLEDHHIDQMIEELLDSGFSMEFC 489
           S   ID T++    KESEG         +   +F+  LE+ HI+QMIEELL  G S+E C
Sbjct: 124 SSQEIDTTMKHEEEKESEGNWVFKKVKVENSQQFIKPLEEDHIEQMIEELLHYG-SIELC 182

Query: 490 S 492
           S
Sbjct: 183 S 183


>ref|XP_003603319.1| Ethylene-responsive transcription factor SHINE [Medicago
           truncatula] gi|355492367|gb|AES73570.1|
           Ethylene-responsive transcription factor SHINE [Medicago
           truncatula]
          Length = 259

 Score =  160 bits (406), Expect = 1e-37
 Identities = 92/181 (50%), Positives = 111/181 (61%), Gaps = 17/181 (9%)
 Frame = +1

Query: 1   PQQRFRGVRQRHWGSWLSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXKLMCGPKARTNF 180
           PQQR+RGVRQRHWGSW+SEIRHP+LKTRIWLGTFET            +LMCG +ARTNF
Sbjct: 74  PQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNF 133

Query: 181 TYXXXXXXXXXTKFLSATLTAKLHRCHLQSLQIAQTSSKELPGKSAVPPV----RNIGEK 348
            Y         +K LSATLTAKLHRC++ SLQI +  S + P K +   V     N   K
Sbjct: 134 PYNPNVSQSSSSKLLSATLTAKLHRCYMASLQITRPISLQQPQKQSSQSVNISTNNAPMK 193

Query: 349 SVSVIDNTVR----KESEG---------DKEIEFMSCLEDHHIDQMIEELLDSGFSMEFC 489
           S   ID T++    KESEG         +   +F+  LE+ HI+QMIEELL  G S+E C
Sbjct: 194 SSQEIDTTMKHEEEKESEGNWVFKKVKVENSQQFIKPLEEDHIEQMIEELLHYG-SIELC 252

Query: 490 S 492
           S
Sbjct: 253 S 253


>gb|ADE41114.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 179

 Score =  158 bits (400), Expect = 6e-37
 Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 8/176 (4%)
 Frame = +1

Query: 1   PQQRFRGVRQRHWGSWLSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXKLMCGPKARTNF 180
           PQQR+RGVRQRHWGSW+SEIRHPLLKTRIWLGTFET            +LMCGP+ARTNF
Sbjct: 4   PQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNF 63

Query: 181 TYXXXXXXXXXTKFLSATLTAKLHRCHLQSLQIAQTSSKELPGK--------SAVPPVRN 336
            Y         +K LSATLTAKLHRC++ SLQ+ +TS +E P K        + +P ++ 
Sbjct: 64  PYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQE-PKKPQALASSGAKMPDIKP 122

Query: 337 IGEKSVSVIDNTVRKESEGDKEIEFMSCLEDHHIDQMIEELLDSGFSMEFCSTTSP 504
              + V+  +N V +E + +   +    LED HI+QMIEELL  G S+E CS   P
Sbjct: 123 EIHQPVAE-ENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYG-SIELCSVLPP 176


>ref|XP_002297803.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222845061|gb|EEE82608.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 181

 Score =  158 bits (400), Expect = 6e-37
 Identities = 93/179 (51%), Positives = 107/179 (59%), Gaps = 12/179 (6%)
 Frame = +1

Query: 1   PQQRFRGVRQRHWGSWLSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXKLMCGPKARTNF 180
           PQQR+RGVRQRHWGSW+SEIRHPLLKTRIWLGTFET            +LMCGPK+RTNF
Sbjct: 4   PQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKSRTNF 63

Query: 181 TYXXXXXXXXXTKFLSATLTAKLHRCHLQSLQI----AQTSSKELPGKSAVPPVRNIGEK 348
            Y         +K LSATL AKLH+CH+ SLQ     A   S E   K        I  +
Sbjct: 64  PYNPNEPQSSSSKLLSATLAAKLHKCHMASLQATKKNATKQSYEAQCKKTFDTSHGIAGE 123

Query: 349 SVSV-----IDNTVRKESE---GDKEIEFMSCLEDHHIDQMIEELLDSGFSMEFCSTTS 501
           +V         N   ++S+   GD +  F S LE HHI+QMIEELLD G SMEFCS  S
Sbjct: 124 TVETGSKWQEGNWAGEDSQVGNGDHQQHFKS-LEAHHIEQMIEELLDCG-SMEFCSAGS 180


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